RNA–Protein interactions for RNA: ENST00000638895.1

KCNMA1-247, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-247ENST00000638895 NISCHQ9Y2I1 1504 aa18.13■□□□□ 0.49
KCNMA1-247ENST00000638895 CCDC180Q9P1Z9 1646 aa15.95■□□□□ 0.14
KCNMA1-247ENST00000638895 DCAF8L2P0C7V8 631 aa15.91■□□□□ 0.14
KCNMA1-247ENST00000638895 ZCCHC6Q5VYS8 1495 aaKnown RBP15.43■□□□□ 0.06
KCNMA1-247ENST00000638895 DCAF1Q9Y4B6 1507 aa15.29■□□□□ 0.04
KCNMA1-247ENST00000638895 MYO15BQ96JP2 1530 aa14.98□□□□□ -0.01
KCNMA1-247ENST00000638895 SHROOM4Q9ULL8 1493 aa14.79□□□□□ -0.04
KCNMA1-247ENST00000638895 ABCC9O60706 1549 aa14.77□□□□□ -0.05
KCNMA1-247ENST00000638895 NACADO15069 1562 aa14.51□□□□□ -0.09
KCNMA1-247ENST00000638895 PABPN1Q86U42 306 aaKnown RBP eCLIP14.4□□□□□ -0.1
KCNMA1-247ENST00000638895 SUPT5HO00267 1087 aaKnown RBP14.35□□□□□ -0.11
KCNMA1-247ENST00000638895 UNC13AQ9UPW8 1703 aa14.28□□□□□ -0.12
KCNMA1-247ENST00000638895 SCRIBQ14160 1630 aa14.26□□□□□ -0.13
KCNMA1-247ENST00000638895 RB1CC1Q8TDY2 1594 aa14.2□□□□□ -0.14
KCNMA1-247ENST00000638895 MYT1Q01538 1121 aa14.16□□□□□ -0.14
KCNMA1-247ENST00000638895 EIF4G1Q04637 1599 aaKnown RBP14.13□□□□□ -0.15
KCNMA1-247ENST00000638895 PELP1Q8IZL8 1130 aaKnown RBP14.1□□□□□ -0.15
KCNMA1-247ENST00000638895 RSF1Q96T23 1441 aaPredicted RBP14.1□□□□□ -0.15
KCNMA1-247ENST00000638895 BAZ1AQ9NRL2 1556 aaPredicted RBP14.07□□□□□ -0.16
KCNMA1-247ENST00000638895 SLC24A1O60721 1099 aa14.06□□□□□ -0.16
KCNMA1-247ENST00000638895 PEG3Q9GZU2 1588 aa13.96□□□□□ -0.17
KCNMA1-247ENST00000638895 MROH2BQ7Z745 1585 aa13.94□□□□□ -0.18
KCNMA1-247ENST00000638895 BICRAQ9NZM4 1560 aa13.94□□□□□ -0.18
KCNMA1-247ENST00000638895 SMARCA4P51532 1647 aa13.92□□□□□ -0.18
KCNMA1-247ENST00000638895 WIZO95785 1651 aa13.91□□□□□ -0.18
KCNMA1-247ENST00000638895 CHIC1Q5VXU3 224 aa13.9□□□□□ -0.18
KCNMA1-247ENST00000638895 CECR2Q9BXF3 1484 aa13.87□□□□□ -0.19
KCNMA1-247ENST00000638895 EHMT2Q96KQ7 1210 aa13.86□□□□□ -0.19
KCNMA1-247ENST00000638895 TOP2AP11388 1531 aaKnown RBP13.86□□□□□ -0.19
KCNMA1-247ENST00000638895 SMARCA2P51531 1590 aa13.74□□□□□ -0.21
KCNMA1-247ENST00000638895 TTBK1Q5TCY1 1321 aaPredicted RBP13.68□□□□□ -0.22
KCNMA1-247ENST00000638895 PRDM2Q13029 1718 aa13.53□□□□□ -0.24
KCNMA1-247ENST00000638895 CCDC88BA6NC98 1476 aa13.53□□□□□ -0.24
KCNMA1-247ENST00000638895 FAM9AQ8IZU1 332 aaPredicted RBP13.52□□□□□ -0.25
KCNMA1-247ENST00000638895 HMGXB3Q12766 1538 aa13.49□□□□□ -0.25
KCNMA1-247ENST00000638895 RANGAP1P46060 587 aaPredicted RBP13.44□□□□□ -0.26
KCNMA1-247ENST00000638895 ERICH6Q7L0X2 663 aa13.43□□□□□ -0.26
KCNMA1-247ENST00000638895 BIVM-ERCC5R4GMW8 1640 aa13.43□□□□□ -0.26
KCNMA1-247ENST00000638895 ATAD2BQ9ULI0 1458 aa13.42□□□□□ -0.26
KCNMA1-247ENST00000638895 PRKCSHP14314 528 aaPredicted RBP13.37□□□□□ -0.27
KCNMA1-247ENST00000638895 DNAJC5BQ9UF47 199 aa13.35□□□□□ -0.27
KCNMA1-247ENST00000638895 KIF21BO75037 1637 aa13.34□□□□□ -0.27
KCNMA1-247ENST00000638895 ABCC8Q09428 1581 aa13.34□□□□□ -0.27
KCNMA1-247ENST00000638895 HRCP23327 699 aa13.34□□□□□ -0.27
KCNMA1-247ENST00000638895 EEA1Q15075 1411 aa13.32□□□□□ -0.28
KCNMA1-247ENST00000638895 SYNJ1O43426 1573 aa13.31□□□□□ -0.28
KCNMA1-247ENST00000638895 TOP2BQ02880 1626 aa13.31□□□□□ -0.28
KCNMA1-247ENST00000638895 NCAPD3P42695 1498 aa13.3□□□□□ -0.28
KCNMA1-247ENST00000638895 WRNQ14191 1432 aaPredicted RBP eCLIP13.27□□□□□ -0.28
KCNMA1-247ENST00000638895 BAZ1BQ9UIG0 1483 aaKnown RBP13.26□□□□□ -0.29
KCNMA1-247ENST00000638895 TRIM41Q8WV44 630 aa13.18□□□□□ -0.3
KCNMA1-247ENST00000638895 FBLN2P98095 1184 aa13.15□□□□□ -0.3
KCNMA1-247ENST00000638895 PCGF6Q9BYE7 350 aa13.15□□□□□ -0.3
KCNMA1-247ENST00000638895 LOC105371045A0A1W2PR82 267 aa13.15□□□□□ -0.31
KCNMA1-247ENST00000638895 ERICH3Q5RHP9 1530 aa13.13□□□□□ -0.31
KCNMA1-247ENST00000638895 PPARGC1BQ86YN6 1023 aaKnown RBP13.13□□□□□ -0.31
KCNMA1-247ENST00000638895 CFTRP13569 1480 aa13.12□□□□□ -0.31
KCNMA1-247ENST00000638895 TNIKQ9UKE5 1360 aa13.1□□□□□ -0.31
KCNMA1-247ENST00000638895 DAXXQ9UER7 740 aaPredicted RBP13.09□□□□□ -0.31
KCNMA1-247ENST00000638895 SOGA1O94964 1423 aa13.07□□□□□ -0.32
KCNMA1-247ENST00000638895 GOLGA3Q08378 1498 aa13.06□□□□□ -0.32
KCNMA1-247ENST00000638895 CUX1P39880 1505 aa13.06□□□□□ -0.32
KCNMA1-247ENST00000638895 ATP1B4Q9UN42 357 aaPredicted RBP13.05□□□□□ -0.32
KCNMA1-247ENST00000638895 RUSC2Q8N2Y8 1516 aa13.05□□□□□ -0.32
KCNMA1-247ENST00000638895 CEP164Q9UPV0 1460 aa13.04□□□□□ -0.32
KCNMA1-247ENST00000638895 APLP2Q06481 763 aa13.03□□□□□ -0.32
KCNMA1-247ENST00000638895 TRIM26Q12899 539 aaPredicted RBP13.03□□□□□ -0.32
KCNMA1-247ENST00000638895 WDR97A6NE52 1622 aa13.03□□□□□ -0.32
KCNMA1-247ENST00000638895 PRXQ9BXM0 1461 aa13□□□□□ -0.33
KCNMA1-247ENST00000638895 CEP162Q5TB80 1403 aa13□□□□□ -0.33
KCNMA1-247ENST00000638895 CC2D2AQ9P2K1 1620 aa12.98□□□□□ -0.33
KCNMA1-247ENST00000638895 UBTFP17480 764 aaKnown RBP12.94□□□□□ -0.34
KCNMA1-247ENST00000638895 DNMBPQ6XZF7 1577 aa12.86□□□□□ -0.35
KCNMA1-247ENST00000638895 RAPGEF2Q9Y4G8 1499 aa12.86□□□□□ -0.35
KCNMA1-247ENST00000638895 LAMC3Q9Y6N6 1575 aa12.86□□□□□ -0.35
KCNMA1-247ENST00000638895 ERCC6Q03468 1493 aa12.84□□□□□ -0.35
KCNMA1-247ENST00000638895 CSRNP3Q8WYN3 585 aa12.84□□□□□ -0.35
KCNMA1-247ENST00000638895 VPS8Q8N3P4 1428 aa12.82□□□□□ -0.36
KCNMA1-247ENST00000638895 CUL7Q14999 1698 aa12.82□□□□□ -0.36
KCNMA1-247ENST00000638895 MAP3K1Q13233 1512 aa12.82□□□□□ -0.36
KCNMA1-247ENST00000638895 ARID3CA6NKF2 412 aa12.82□□□□□ -0.36
KCNMA1-247ENST00000638895 ARAP1Q96P48 1450 aa12.81□□□□□ -0.36
KCNMA1-247ENST00000638895 CFAP43Q8NDM7 1665 aa12.8□□□□□ -0.36
KCNMA1-247ENST00000638895 ABCA5Q8WWZ7 1642 aa12.8□□□□□ -0.36
KCNMA1-247ENST00000638895 CTTNBP2Q8WZ74 1663 aa12.8□□□□□ -0.36
KCNMA1-247ENST00000638895 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.8□□□□□ -0.36
KCNMA1-247ENST00000638895 HNRNPUL2Q1KMD3 747 aaKnown RBP12.8□□□□□ -0.36
KCNMA1-247ENST00000638895 CADPSQ9ULU8 1353 aa12.79□□□□□ -0.36
KCNMA1-247ENST00000638895 ABCA10Q8WWZ4 1543 aa12.77□□□□□ -0.37
KCNMA1-247ENST00000638895 KIF21AQ7Z4S6 1674 aa12.76□□□□□ -0.37
KCNMA1-247ENST00000638895 CLIP1P30622 1438 aa12.75□□□□□ -0.37
KCNMA1-247ENST00000638895 P3H3Q8IVL6 736 aa12.75□□□□□ -0.37
KCNMA1-247ENST00000638895 KIF27Q86VH2 1401 aa12.74□□□□□ -0.37
KCNMA1-247ENST00000638895 ZEB1P37275 1124 aaPredicted RBP12.73□□□□□ -0.37
KCNMA1-247ENST00000638895 CUX2O14529 1486 aa12.73□□□□□ -0.37
KCNMA1-247ENST00000638895 FGD5Q6ZNL6 1462 aa12.71□□□□□ -0.37
KCNMA1-247ENST00000638895 TARBP1Q13395 1621 aaKnown RBP12.69□□□□□ -0.38
KCNMA1-247ENST00000638895 TOPBP1Q92547 1522 aa12.69□□□□□ -0.38
KCNMA1-247ENST00000638895 SAMD9Q5K651 1589 aa12.69□□□□□ -0.38
KCNMA1-247ENST00000638895 SCAF1Q9H7N4 1312 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms