RNA–Protein interactions for RNA: ENST00000638603.1

SCARB2-211, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-211ENST00000638603 SETD5Q9C0A6 1442 aa11.61□□□□□ -0.55
SCARB2-211ENST00000638603 CFTRP13569 1480 aa11.6□□□□□ -0.55
SCARB2-211ENST00000638603 FKBP8Q14318 412 aa11.59□□□□□ -0.55
SCARB2-211ENST00000638603 ANP32CO43423 234 aa11.58□□□□□ -0.56
SCARB2-211ENST00000638603 TRIM52Q96A61 297 aa11.58□□□□□ -0.56
SCARB2-211ENST00000638603 PHLDB1Q86UU1 1377 aa11.57□□□□□ -0.56
SCARB2-211ENST00000638603 HMGXB3Q12766 1538 aa11.57□□□□□ -0.56
SCARB2-211ENST00000638603 CADPSQ9ULU8 1353 aa11.55□□□□□ -0.56
SCARB2-211ENST00000638603 FHAD1B1AJZ9 1412 aa11.55□□□□□ -0.56
SCARB2-211ENST00000638603 TONSLQ96HA7 1378 aa11.54□□□□□ -0.56
SCARB2-211ENST00000638603 FGD5Q6ZNL6 1462 aa11.53□□□□□ -0.56
SCARB2-211ENST00000638603 LRRC9Q6ZRR7 1453 aa11.53□□□□□ -0.56
SCARB2-211ENST00000638603 FHOD3Q2V2M9 1422 aa11.53□□□□□ -0.56
SCARB2-211ENST00000638603 TSHZ2Q9NRE2 1034 aa11.51□□□□□ -0.57
SCARB2-211ENST00000638603 MTUS2Q5JR59 1369 aa11.51□□□□□ -0.57
SCARB2-211ENST00000638603 TIAM1Q13009 1591 aa11.5□□□□□ -0.57
SCARB2-211ENST00000638603 PPP1R15AO75807 674 aaPredicted RBP11.5□□□□□ -0.57
SCARB2-211ENST00000638603 ARID3CA6NKF2 412 aa11.48□□□□□ -0.57
SCARB2-211ENST00000638603 CHIC2Q9UKJ5 165 aa11.48□□□□□ -0.57
SCARB2-211ENST00000638603 TIMELESSQ9UNS1 1208 aa11.47□□□□□ -0.57
SCARB2-211ENST00000638603 MAPKBP1O60336 1514 aa11.47□□□□□ -0.57
SCARB2-211ENST00000638603 WDR97A6NE52 1622 aa11.46□□□□□ -0.57
SCARB2-211ENST00000638603 RAD54L2Q9Y4B4 1467 aa11.46□□□□□ -0.58
SCARB2-211ENST00000638603 RRP7BPQ9NSQ0 103 aa11.45□□□□□ -0.58
SCARB2-211ENST00000638603 DNAJC5BQ9UF47 199 aa11.45□□□□□ -0.58
SCARB2-211ENST00000638603 FANCD2Q9BXW9 1451 aa11.44□□□□□ -0.58
SCARB2-211ENST00000638603 HNRNPUQ00839 825 aaKnown RBP eCLIP11.43□□□□□ -0.58
SCARB2-211ENST00000638603 CCER2I3L3R5 266 aa11.42□□□□□ -0.58
SCARB2-211ENST00000638603 MAP3K1Q13233 1512 aa11.41□□□□□ -0.58
SCARB2-211ENST00000638603 CNGB1Q14028 1251 aaPredicted RBP11.41□□□□□ -0.58
SCARB2-211ENST00000638603 TDRD9Q8NDG6 1382 aaKnown RBP11.41□□□□□ -0.58
SCARB2-211ENST00000638603 IRX6P78412 446 aaPredicted RBP11.4□□□□□ -0.58
SCARB2-211ENST00000638603 PCF11O94913 1555 aaKnown RBP11.4□□□□□ -0.58
SCARB2-211ENST00000638603 FMN1Q68DA7 1419 aa11.39□□□□□ -0.59
SCARB2-211ENST00000638603 FGD6Q6ZV73 1430 aa11.38□□□□□ -0.59
SCARB2-211ENST00000638603 CASKIN1Q8WXD9 1431 aa11.38□□□□□ -0.59
SCARB2-211ENST00000638603 ANP32EQ9BTT0 268 aa11.38□□□□□ -0.59
SCARB2-211ENST00000638603 CCDC18Q5T9S5 1454 aa11.37□□□□□ -0.59
SCARB2-211ENST00000638603 POLR3GLQ9BT43 218 aa11.36□□□□□ -0.59
SCARB2-211ENST00000638603 FYCO1Q9BQS8 1478 aa11.36□□□□□ -0.59
SCARB2-211ENST00000638603 POLA1P09884 1462 aaPredicted RBP11.34□□□□□ -0.59
SCARB2-211ENST00000638603 NESP48681 1621 aa11.34□□□□□ -0.59
SCARB2-211ENST00000638603 EIF4G2P78344 907 aaKnown RBP eCLIP11.34□□□□□ -0.59
SCARB2-211ENST00000638603 HSPA5P11021 654 aaKnown RBP11.33□□□□□ -0.6
SCARB2-211ENST00000638603 FAM9BQ8IZU0 186 aa11.33□□□□□ -0.6
SCARB2-211ENST00000638603 RBM19Q9Y4C8 960 aaKnown RBP11.33□□□□□ -0.6
SCARB2-211ENST00000638603 FOXD1Q16676 465 aa11.33□□□□□ -0.6
SCARB2-211ENST00000638603 ERICH6Q7L0X2 663 aa11.33□□□□□ -0.6
SCARB2-211ENST00000638603 TOPBP1Q92547 1522 aa11.32□□□□□ -0.6
SCARB2-211ENST00000638603 UACAQ9BZF9 1416 aa11.32□□□□□ -0.6
SCARB2-211ENST00000638603 CDK11AQ9UQ88 783 aaPredicted RBP11.32□□□□□ -0.6
SCARB2-211ENST00000638603 EFCAB5A4FU69 1503 aa11.3□□□□□ -0.6
SCARB2-211ENST00000638603 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.3□□□□□ -0.6
SCARB2-211ENST00000638603 ABCA10Q8WWZ4 1543 aa11.3□□□□□ -0.6
SCARB2-211ENST00000638603 CC2D2AQ9P2K1 1620 aa11.3□□□□□ -0.6
SCARB2-211ENST00000638603 ZNF326Q5BKZ1 582 aaKnown RBP11.3□□□□□ -0.6
SCARB2-211ENST00000638603 PTPRKQ15262 1439 aa11.3□□□□□ -0.6
SCARB2-211ENST00000638603 NCOA2Q15596 1464 aa11.29□□□□□ -0.6
SCARB2-211ENST00000638603 HFM1A2PYH4 1435 aa11.29□□□□□ -0.6
SCARB2-211ENST00000638603 MYOM3Q5VTT5 1437 aa11.29□□□□□ -0.6
SCARB2-211ENST00000638603 MRS2Q9HD23 443 aa11.28□□□□□ -0.6
SCARB2-211ENST00000638603 DNMBPQ6XZF7 1577 aa11.28□□□□□ -0.6
SCARB2-211ENST00000638603 CFAP43Q8NDM7 1665 aa11.28□□□□□ -0.6
SCARB2-211ENST00000638603 MPHOSPH9Q99550 1183 aa11.27□□□□□ -0.6
SCARB2-211ENST00000638603 L3MBTL2Q969R5 705 aa11.27□□□□□ -0.61
SCARB2-211ENST00000638603 NAIPQ13075 1403 aa11.27□□□□□ -0.61
SCARB2-211ENST00000638603 AQRO60306 1485 aaKnown RBP eCLIP11.27□□□□□ -0.61
SCARB2-211ENST00000638603 WASHC2AQ641Q2 1341 aa11.26□□□□□ -0.61
SCARB2-211ENST00000638603 GAPVD1Q14C86 1478 aa11.25□□□□□ -0.61
SCARB2-211ENST00000638603 SLC4A1APQ9BWU0 796 aaKnown RBP11.25□□□□□ -0.61
SCARB2-211ENST00000638603 PRDM2Q13029 1718 aa11.25□□□□□ -0.61
SCARB2-211ENST00000638603 ZNF777Q9ULD5 760 aaPredicted RBP11.25□□□□□ -0.61
SCARB2-211ENST00000638603 SENP3-EIF4A1A0A087X0R7 540 aa11.22□□□□□ -0.61
SCARB2-211ENST00000638603 PTPN23Q9H3S7 1636 aa11.21□□□□□ -0.61
SCARB2-211ENST00000638603 SNAPC4Q5SXM2 1469 aa11.21□□□□□ -0.61
SCARB2-211ENST00000638603 CCDC184Q52MB2 194 aa11.21□□□□□ -0.61
SCARB2-211ENST00000638603 CUL7Q14999 1698 aa11.21□□□□□ -0.62
SCARB2-211ENST00000638603 PDS5BQ9NTI5 1447 aa11.2□□□□□ -0.62
SCARB2-211ENST00000638603 URB2Q14146 1524 aaKnown RBP11.19□□□□□ -0.62
SCARB2-211ENST00000638603 B4GALNT3Q6L9W6 998 aa11.19□□□□□ -0.62
SCARB2-211ENST00000638603 FBLN2P98095 1184 aa11.18□□□□□ -0.62
SCARB2-211ENST00000638603 PRKRIP1Q9H875 184 aaPredicted RBP11.18□□□□□ -0.62
SCARB2-211ENST00000638603 PPP4R2Q9NY27 417 aa11.18□□□□□ -0.62
SCARB2-211ENST00000638603 ZNF644Q9H582 1327 aaPredicted RBP11.17□□□□□ -0.62
SCARB2-211ENST00000638603 C11orf95C9JLR9 678 aaPredicted RBP11.17□□□□□ -0.62
SCARB2-211ENST00000638603 EHBP1L1Q8N3D4 1523 aa11.17□□□□□ -0.62
SCARB2-211ENST00000638603 GRIN2BQ13224 1484 aa11.17□□□□□ -0.62
SCARB2-211ENST00000638603 SUPT6HQ7KZ85 1726 aaKnown RBP11.17□□□□□ -0.62
SCARB2-211ENST00000638603 CTTNBP2Q8WZ74 1663 aa11.17□□□□□ -0.62
SCARB2-211ENST00000638603 NBPF8Q3BBV2 869 aa11.15□□□□□ -0.62
SCARB2-211ENST00000638603 CFDP1Q9UEE9 299 aaPredicted RBP11.15□□□□□ -0.62
SCARB2-211ENST00000638603 CCDC7Q96M83 1385 aa11.15□□□□□ -0.63
SCARB2-211ENST00000638603 CNTLNQ9NXG0 1405 aa11.14□□□□□ -0.63
SCARB2-211ENST00000638603 CDK13Q14004 1512 aaKnown RBP11.13□□□□□ -0.63
SCARB2-211ENST00000638603 KDM2AQ9Y2K7 1162 aa11.12□□□□□ -0.63
SCARB2-211ENST00000638603 KIF7Q2M1P5 1343 aa11.12□□□□□ -0.63
SCARB2-211ENST00000638603 EPRSP07814 1512 aaKnown RBP11.11□□□□□ -0.63
SCARB2-211ENST00000638603 UGGT2Q9NYU1 1516 aa11.11□□□□□ -0.63
SCARB2-211ENST00000638603 TMC1Q8TDI8 760 aa11.11□□□□□ -0.63
SCARB2-211ENST00000638603 MSH5O43196 834 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms