RNA–Protein interactions for RNA: ENST00000638603.1

SCARB2-211, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-211ENST00000638603 NISCHQ9Y2I1 1504 aa16.11■□□□□ 0.17
SCARB2-211ENST00000638603 SHROOM4Q9ULL8 1493 aa14.26□□□□□ -0.13
SCARB2-211ENST00000638603 SUPT5HO00267 1087 aaKnown RBP14.12□□□□□ -0.15
SCARB2-211ENST00000638603 DCAF8L2P0C7V8 631 aa13.96□□□□□ -0.17
SCARB2-211ENST00000638603 ZCCHC6Q5VYS8 1495 aaKnown RBP13.59□□□□□ -0.23
SCARB2-211ENST00000638603 CHIC1Q5VXU3 224 aa13.56□□□□□ -0.24
SCARB2-211ENST00000638603 PCGF6Q9BYE7 350 aa13.48□□□□□ -0.25
SCARB2-211ENST00000638603 CCDC180Q9P1Z9 1646 aa13.43□□□□□ -0.26
SCARB2-211ENST00000638603 HRCP23327 699 aa13.39□□□□□ -0.27
SCARB2-211ENST00000638603 MYO15BQ96JP2 1530 aa13.39□□□□□ -0.27
SCARB2-211ENST00000638603 LOC105371045A0A1W2PR82 267 aa13.3□□□□□ -0.28
SCARB2-211ENST00000638603 PPARGC1BQ86YN6 1023 aaKnown RBP13.22□□□□□ -0.29
SCARB2-211ENST00000638603 EHMT2Q96KQ7 1210 aa13.13□□□□□ -0.31
SCARB2-211ENST00000638603 FAM9AQ8IZU1 332 aaPredicted RBP13.11□□□□□ -0.31
SCARB2-211ENST00000638603 TRIM41Q8WV44 630 aa13.07□□□□□ -0.32
SCARB2-211ENST00000638603 TRIM26Q12899 539 aaPredicted RBP13.06□□□□□ -0.32
SCARB2-211ENST00000638603 DCAF1Q9Y4B6 1507 aa13.04□□□□□ -0.32
SCARB2-211ENST00000638603 SCRIBQ14160 1630 aa12.9□□□□□ -0.34
SCARB2-211ENST00000638603 RSF1Q96T23 1441 aaPredicted RBP12.88□□□□□ -0.35
SCARB2-211ENST00000638603 ZEB1P37275 1124 aaPredicted RBP12.84□□□□□ -0.35
SCARB2-211ENST00000638603 ABCC9O60706 1549 aa12.82□□□□□ -0.36
SCARB2-211ENST00000638603 TTBK1Q5TCY1 1321 aaPredicted RBP12.72□□□□□ -0.37
SCARB2-211ENST00000638603 RB1CC1Q8TDY2 1594 aa12.71□□□□□ -0.37
SCARB2-211ENST00000638603 CECR2Q9BXF3 1484 aa12.66□□□□□ -0.38
SCARB2-211ENST00000638603 CCER1Q8TC90 406 aaPredicted RBP12.65□□□□□ -0.38
SCARB2-211ENST00000638603 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.62□□□□□ -0.39
SCARB2-211ENST00000638603 MROH2BQ7Z745 1585 aa12.57□□□□□ -0.4
SCARB2-211ENST00000638603 NACADO15069 1562 aa12.53□□□□□ -0.4
SCARB2-211ENST00000638603 UBTFP17480 764 aaKnown RBP12.52□□□□□ -0.41
SCARB2-211ENST00000638603 WIZO95785 1651 aa12.48□□□□□ -0.41
SCARB2-211ENST00000638603 SCAF1Q9H7N4 1312 aaKnown RBP12.44□□□□□ -0.42
SCARB2-211ENST00000638603 DIEXFQ68CQ4 756 aaKnown RBP12.39□□□□□ -0.43
SCARB2-211ENST00000638603 PABPN1Q86U42 306 aaKnown RBP eCLIP12.39□□□□□ -0.43
SCARB2-211ENST00000638603 RANGAP1P46060 587 aaPredicted RBP12.39□□□□□ -0.43
SCARB2-211ENST00000638603 PELP1Q8IZL8 1130 aaKnown RBP12.37□□□□□ -0.43
SCARB2-211ENST00000638603 BAZ1AQ9NRL2 1556 aaPredicted RBP12.37□□□□□ -0.43
SCARB2-211ENST00000638603 CSRNP3Q8WYN3 585 aa12.37□□□□□ -0.43
SCARB2-211ENST00000638603 ABCC8Q09428 1581 aa12.35□□□□□ -0.43
SCARB2-211ENST00000638603 CENPBP07199 599 aaPredicted RBP12.35□□□□□ -0.43
SCARB2-211ENST00000638603 CCDC88BA6NC98 1476 aa12.34□□□□□ -0.43
SCARB2-211ENST00000638603 APLP2Q06481 763 aa12.32□□□□□ -0.44
SCARB2-211ENST00000638603 HNRNPUL2Q1KMD3 747 aaKnown RBP12.32□□□□□ -0.44
SCARB2-211ENST00000638603 CEP162Q5TB80 1403 aa12.32□□□□□ -0.44
SCARB2-211ENST00000638603 SOGA1O94964 1423 aa12.32□□□□□ -0.44
SCARB2-211ENST00000638603 ACIN1Q9UKV3 1341 aaKnown RBP12.31□□□□□ -0.44
SCARB2-211ENST00000638603 NEUROD1Q13562 356 aa12.3□□□□□ -0.44
SCARB2-211ENST00000638603 YTHDC1Q96MU7 727 aaKnown RBP12.28□□□□□ -0.44
SCARB2-211ENST00000638603 GTF3C3Q9Y5Q9 886 aa12.26□□□□□ -0.45
SCARB2-211ENST00000638603 TNIKQ9UKE5 1360 aa12.25□□□□□ -0.45
SCARB2-211ENST00000638603 TOP2AP11388 1531 aaKnown RBP12.25□□□□□ -0.45
SCARB2-211ENST00000638603 RUSC2Q8N2Y8 1516 aa12.21□□□□□ -0.45
SCARB2-211ENST00000638603 ZNF316A6NFI3 1004 aaPredicted RBP12.21□□□□□ -0.45
SCARB2-211ENST00000638603 SMARCA4P51532 1647 aa12.2□□□□□ -0.46
SCARB2-211ENST00000638603 WRNQ14191 1432 aaPredicted RBP eCLIP12.19□□□□□ -0.46
SCARB2-211ENST00000638603 SMARCA2P51531 1590 aa12.18□□□□□ -0.46
SCARB2-211ENST00000638603 EEA1Q15075 1411 aa12.18□□□□□ -0.46
SCARB2-211ENST00000638603 GOLGA3Q08378 1498 aa12.17□□□□□ -0.46
SCARB2-211ENST00000638603 EIF4G1Q04637 1599 aaKnown RBP12.14□□□□□ -0.47
SCARB2-211ENST00000638603 CLIP1P30622 1438 aa12.11□□□□□ -0.47
SCARB2-211ENST00000638603 MIER1Q8N108 512 aa12.07□□□□□ -0.48
SCARB2-211ENST00000638603 CEP164Q9UPV0 1460 aa12.07□□□□□ -0.48
SCARB2-211ENST00000638603 ITGAEP38570 1179 aa12.03□□□□□ -0.48
SCARB2-211ENST00000638603 BAZ1BQ9UIG0 1483 aaKnown RBP12□□□□□ -0.49
SCARB2-211ENST00000638603 VPS8Q8N3P4 1428 aa11.99□□□□□ -0.49
SCARB2-211ENST00000638603 RAPGEF2Q9Y4G8 1499 aa11.98□□□□□ -0.49
SCARB2-211ENST00000638603 UNC13AQ9UPW8 1703 aa11.97□□□□□ -0.49
SCARB2-211ENST00000638603 SYNJ1O43426 1573 aa11.96□□□□□ -0.5
SCARB2-211ENST00000638603 ATAD2BQ9ULI0 1458 aa11.94□□□□□ -0.5
SCARB2-211ENST00000638603 ATP1B4Q9UN42 357 aaPredicted RBP11.92□□□□□ -0.5
SCARB2-211ENST00000638603 KANK4Q5T7N3 995 aaPredicted RBP11.9□□□□□ -0.5
SCARB2-211ENST00000638603 BICRAQ9NZM4 1560 aa11.9□□□□□ -0.5
SCARB2-211ENST00000638603 KIF21BO75037 1637 aa11.89□□□□□ -0.51
SCARB2-211ENST00000638603 PEG3Q9GZU2 1588 aa11.82□□□□□ -0.52
SCARB2-211ENST00000638603 FAM50AQ14320 339 aaKnown RBP11.81□□□□□ -0.52
SCARB2-211ENST00000638603 DHX57Q6P158 1386 aaKnown RBP11.81□□□□□ -0.52
SCARB2-211ENST00000638603 KIF27Q86VH2 1401 aa11.81□□□□□ -0.52
SCARB2-211ENST00000638603 CLSPNQ9HAW4 1339 aa11.8□□□□□ -0.52
SCARB2-211ENST00000638603 P3H3Q8IVL6 736 aa11.8□□□□□ -0.52
SCARB2-211ENST00000638603 MYT1Q01538 1121 aa11.77□□□□□ -0.52
SCARB2-211ENST00000638603 CCNB3Q8WWL7 1395 aa11.76□□□□□ -0.53
SCARB2-211ENST00000638603 TOP2BQ02880 1626 aa11.75□□□□□ -0.53
SCARB2-211ENST00000638603 ARAP1Q96P48 1450 aa11.74□□□□□ -0.53
SCARB2-211ENST00000638603 PRXQ9BXM0 1461 aa11.74□□□□□ -0.53
SCARB2-211ENST00000638603 DDX10Q13206 875 aaKnown RBP11.7□□□□□ -0.54
SCARB2-211ENST00000638603 ERICH3Q5RHP9 1530 aa11.69□□□□□ -0.54
SCARB2-211ENST00000638603 BCANQ96GW7 911 aa11.69□□□□□ -0.54
SCARB2-211ENST00000638603 SUPT16HQ9Y5B9 1047 aaKnown RBP11.69□□□□□ -0.54
SCARB2-211ENST00000638603 SIN3AQ96ST3 1273 aa11.69□□□□□ -0.54
SCARB2-211ENST00000638603 CUX2O14529 1486 aa11.69□□□□□ -0.54
SCARB2-211ENST00000638603 HIRIP3Q9BW71 556 aaPredicted RBP11.68□□□□□ -0.54
SCARB2-211ENST00000638603 RAB3GAP2Q9H2M9 1393 aa11.68□□□□□ -0.54
SCARB2-211ENST00000638603 CUX1P39880 1505 aa11.67□□□□□ -0.54
SCARB2-211ENST00000638603 RRBP1Q9P2E9 1410 aaKnown RBP11.66□□□□□ -0.54
SCARB2-211ENST00000638603 KCNH8Q96L42 1107 aa11.66□□□□□ -0.54
SCARB2-211ENST00000638603 ARHGAP35Q9NRY4 1499 aa11.65□□□□□ -0.54
SCARB2-211ENST00000638603 CARMIL1Q5VZK9 1371 aa11.65□□□□□ -0.54
SCARB2-211ENST00000638603 NCAPD3P42695 1498 aa11.65□□□□□ -0.55
SCARB2-211ENST00000638603 BIVM-ERCC5R4GMW8 1640 aa11.63□□□□□ -0.55
SCARB2-211ENST00000638603 IGF1RP08069 1367 aa11.62□□□□□ -0.55
SCARB2-211ENST00000638603 NEFLP07196 543 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms