RNA–Protein interactions for RNA: ENST00000638306.1

KCNMA1-232, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,811 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-232ENST00000638306 NBR1Q14596 966 aa18.22■□□□□ 0.51
KCNMA1-232ENST00000638306 RAPGEF2Q9Y4G8 1499 aa18.22■□□□□ 0.51
KCNMA1-232ENST00000638306 CDK11AQ9UQ88 783 aaPredicted RBP18.21■□□□□ 0.51
KCNMA1-232ENST00000638306 EEA1Q15075 1411 aa18.19■□□□□ 0.5
KCNMA1-232ENST00000638306 RRP7BPQ9NSQ0 103 aa18.17■□□□□ 0.5
KCNMA1-232ENST00000638306 VPS8Q8N3P4 1428 aa18.17■□□□□ 0.5
KCNMA1-232ENST00000638306 TONSLQ96HA7 1378 aa18.14■□□□□ 0.49
KCNMA1-232ENST00000638306 RTN4Q9NQC3 1192 aaKnown RBP18.11■□□□□ 0.49
KCNMA1-232ENST00000638306 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.09■□□□□ 0.49
KCNMA1-232ENST00000638306 PAK3O75914 559 aaPredicted RBP18.08■□□□□ 0.49
KCNMA1-232ENST00000638306 IL27Q8NEV9 243 aa18.08■□□□□ 0.48
KCNMA1-232ENST00000638306 KIF27Q86VH2 1401 aa18.08■□□□□ 0.48
KCNMA1-232ENST00000638306 TOP2AP11388 1531 aaKnown RBP18.07■□□□□ 0.48
KCNMA1-232ENST00000638306 CCNB3Q8WWL7 1395 aa18.07■□□□□ 0.48
KCNMA1-232ENST00000638306 SMARCA4P51532 1647 aa18.04■□□□□ 0.48
KCNMA1-232ENST00000638306 PPP1R15AO75807 674 aaPredicted RBP18.04■□□□□ 0.48
KCNMA1-232ENST00000638306 CUX2O14529 1486 aa18.04■□□□□ 0.48
KCNMA1-232ENST00000638306 MTUS2Q5JR59 1369 aa18.04■□□□□ 0.48
KCNMA1-232ENST00000638306 ATAD2BQ9ULI0 1458 aa18.03■□□□□ 0.48
KCNMA1-232ENST00000638306 FOXD1Q16676 465 aa18.03■□□□□ 0.48
KCNMA1-232ENST00000638306 RAB3GAP2Q9H2M9 1393 aa18.02■□□□□ 0.48
KCNMA1-232ENST00000638306 NOP58Q9Y2X3 529 aaKnown RBP18.02■□□□□ 0.47
KCNMA1-232ENST00000638306 SMARCA2P51531 1590 aa18■□□□□ 0.47
KCNMA1-232ENST00000638306 NPM2Q86SE8 214 aaKnown RBP17.99■□□□□ 0.47
KCNMA1-232ENST00000638306 CARMIL1Q5VZK9 1371 aa17.98■□□□□ 0.47
KCNMA1-232ENST00000638306 SLC4A1APQ9BWU0 796 aaKnown RBP17.98■□□□□ 0.47
KCNMA1-232ENST00000638306 TDRD9Q8NDG6 1382 aaKnown RBP17.97■□□□□ 0.47
KCNMA1-232ENST00000638306 CCER2I3L3R5 266 aa17.97■□□□□ 0.47
KCNMA1-232ENST00000638306 MRS2Q9HD23 443 aa17.97■□□□□ 0.47
KCNMA1-232ENST00000638306 ERICH6BQ5W0A0 696 aa17.96■□□□□ 0.47
KCNMA1-232ENST00000638306 WDR97A6NE52 1622 aa17.95■□□□□ 0.46
KCNMA1-232ENST00000638306 B4GALNT3Q6L9W6 998 aa17.95■□□□□ 0.46
KCNMA1-232ENST00000638306 KIF21BO75037 1637 aa17.93■□□□□ 0.46
KCNMA1-232ENST00000638306 CHMP7Q8WUX9 453 aaPredicted RBP17.93■□□□□ 0.46
KCNMA1-232ENST00000638306 SENP3Q9H4L4 574 aaPredicted RBP17.92■□□□□ 0.46
KCNMA1-232ENST00000638306 KDM2AQ9Y2K7 1162 aa17.92■□□□□ 0.46
KCNMA1-232ENST00000638306 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.91■□□□□ 0.46
KCNMA1-232ENST00000638306 MAPKBP1O60336 1514 aa17.89■□□□□ 0.45
KCNMA1-232ENST00000638306 PPP4R2Q9NY27 417 aa17.88■□□□□ 0.45
KCNMA1-232ENST00000638306 UBE2Q2Q8WVN8 375 aa17.87■□□□□ 0.45
KCNMA1-232ENST00000638306 RTL5Q5HYW3 569 aaPredicted RBP17.86■□□□□ 0.45
KCNMA1-232ENST00000638306 SYNJ1O43426 1573 aa17.83■□□□□ 0.44
KCNMA1-232ENST00000638306 DNAJC5BQ9UF47 199 aa17.82■□□□□ 0.44
KCNMA1-232ENST00000638306 SETD5Q9C0A6 1442 aa17.81■□□□□ 0.44
KCNMA1-232ENST00000638306 RRBP1Q9P2E9 1410 aaKnown RBP17.8■□□□□ 0.44
KCNMA1-232ENST00000638306 EIF4G2P78344 907 aaKnown RBP eCLIP17.79■□□□□ 0.44
KCNMA1-232ENST00000638306 HSPA5P11021 654 aaKnown RBP17.77■□□□□ 0.43
KCNMA1-232ENST00000638306 FHOD3Q2V2M9 1422 aa17.77■□□□□ 0.43
KCNMA1-232ENST00000638306 ARAP1Q96P48 1450 aa17.76■□□□□ 0.43
KCNMA1-232ENST00000638306 RGL3Q3MIN7 710 aa17.75■□□□□ 0.43
KCNMA1-232ENST00000638306 CADPSQ9ULU8 1353 aa17.75■□□□□ 0.43
KCNMA1-232ENST00000638306 IPO9Q96P70 1041 aaKnown RBP17.74■□□□□ 0.43
KCNMA1-232ENST00000638306 ZBTB47Q9UFB7 747 aaPredicted RBP17.73■□□□□ 0.43
KCNMA1-232ENST00000638306 EIF5BO60841 1220 aaKnown RBP17.72■□□□□ 0.43
KCNMA1-232ENST00000638306 ANP32AP39687 249 aaKnown RBP17.71■□□□□ 0.43
KCNMA1-232ENST00000638306 TMC1Q8TDI8 760 aa17.7■□□□□ 0.42
KCNMA1-232ENST00000638306 CCDC184Q52MB2 194 aa17.7■□□□□ 0.42
KCNMA1-232ENST00000638306 PHLDB1Q86UU1 1377 aa17.69■□□□□ 0.42
KCNMA1-232ENST00000638306 CFDP1Q9UEE9 299 aaPredicted RBP17.68■□□□□ 0.42
KCNMA1-232ENST00000638306 LAS1LQ9Y4W2 734 aaKnown RBP17.68■□□□□ 0.42
KCNMA1-232ENST00000638306 CHGAP10645 457 aaKnown RBP17.68■□□□□ 0.42
KCNMA1-232ENST00000638306 DAXXQ9UER7 740 aaPredicted RBP17.67■□□□□ 0.42
KCNMA1-232ENST00000638306 RAD54L2Q9Y4B4 1467 aa17.66■□□□□ 0.42
KCNMA1-232ENST00000638306 TSPY4P0CV99 314 aa17.66■□□□□ 0.42
KCNMA1-232ENST00000638306 TSPY10P0CW01 314 aa17.66■□□□□ 0.42
KCNMA1-232ENST00000638306 BRPF3Q9ULD4 1205 aa17.65■□□□□ 0.42
KCNMA1-232ENST00000638306 IGF1RP08069 1367 aa17.65■□□□□ 0.42
KCNMA1-232ENST00000638306 WASHC2AQ641Q2 1341 aa17.64■□□□□ 0.41
KCNMA1-232ENST00000638306 L3MBTL2Q969R5 705 aa17.62■□□□□ 0.41
KCNMA1-232ENST00000638306 NEFMP07197 916 aa17.62■□□□□ 0.41
KCNMA1-232ENST00000638306 PLEKHD1A6NEE1 506 aa17.6■□□□□ 0.41
KCNMA1-232ENST00000638306 PLPPR3Q6T4P5 718 aa17.57■□□□□ 0.4
KCNMA1-232ENST00000638306 NESP48681 1621 aa17.56■□□□□ 0.4
KCNMA1-232ENST00000638306 FHAD1B1AJZ9 1412 aa17.56■□□□□ 0.4
KCNMA1-232ENST00000638306 ARHGAP35Q9NRY4 1499 aa17.56■□□□□ 0.4
KCNMA1-232ENST00000638306 FANCD2Q9BXW9 1451 aa17.54■□□□□ 0.4
KCNMA1-232ENST00000638306 MPHOSPH9Q99550 1183 aa17.54■□□□□ 0.4
KCNMA1-232ENST00000638306 FGD5Q6ZNL6 1462 aa17.54■□□□□ 0.4
KCNMA1-232ENST00000638306 BICRAQ9NZM4 1560 aa17.53■□□□□ 0.4
KCNMA1-232ENST00000638306 ERCC6Q03468 1493 aa17.52■□□□□ 0.39
KCNMA1-232ENST00000638306 TIMELESSQ9UNS1 1208 aa17.52■□□□□ 0.39
KCNMA1-232ENST00000638306 WASHC2CQ9Y4E1 1318 aa17.51■□□□□ 0.39
KCNMA1-232ENST00000638306 AKNAQ7Z591 1439 aa17.51■□□□□ 0.39
KCNMA1-232ENST00000638306 C11orf95C9JLR9 678 aaPredicted RBP17.5■□□□□ 0.39
KCNMA1-232ENST00000638306 ARXQ96QS3 562 aa17.5■□□□□ 0.39
KCNMA1-232ENST00000638306 CARD11Q9BXL7 1154 aa17.49■□□□□ 0.39
KCNMA1-232ENST00000638306 CC2D1BQ5T0F9 858 aaKnown RBP17.48■□□□□ 0.39
KCNMA1-232ENST00000638306 ZNF644Q9H582 1327 aaPredicted RBP17.47■□□□□ 0.39
KCNMA1-232ENST00000638306 PKNOX2Q96KN3 472 aa17.47■□□□□ 0.39
KCNMA1-232ENST00000638306 NCAPD3P42695 1498 aa17.46■□□□□ 0.39
KCNMA1-232ENST00000638306 ZBED9Q6R2W3 1325 aa17.46■□□□□ 0.39
KCNMA1-232ENST00000638306 PRXQ9BXM0 1461 aa17.45■□□□□ 0.38
KCNMA1-232ENST00000638306 DCAF11Q8TEB1 546 aa17.43■□□□□ 0.38
KCNMA1-232ENST00000638306 PKD2Q13563 968 aa17.42■□□□□ 0.38
KCNMA1-232ENST00000638306 PDS5BQ9NTI5 1447 aa17.41■□□□□ 0.38
KCNMA1-232ENST00000638306 PRKRIP1Q9H875 184 aaPredicted RBP17.41■□□□□ 0.38
KCNMA1-232ENST00000638306 CUX1P39880 1505 aa17.41■□□□□ 0.38
KCNMA1-232ENST00000638306 USP35Q9P2H5 1018 aa17.41■□□□□ 0.38
KCNMA1-232ENST00000638306 LRRC9Q6ZRR7 1453 aa17.39■□□□□ 0.38
KCNMA1-232ENST00000638306 HNRNPMP52272 730 aaKnown RBP eCLIP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms