RNA–Protein interactions for RNA: ENST00000638084.1

LINC00598-215, long intergenic non-protein coding RNA 598, humanhuman

TSL 5 BASIC

Gene LINC00598, Length 1,974 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-215ENST00000638084 PHLDB1Q86UU1 1377 aa10.72□□□□□ -0.69
LINC00598-215ENST00000638084 FGD5Q6ZNL6 1462 aa10.71□□□□□ -0.69
LINC00598-215ENST00000638084 SETD5Q9C0A6 1442 aa10.7□□□□□ -0.7
LINC00598-215ENST00000638084 SUPT16HQ9Y5B9 1047 aaKnown RBP10.68□□□□□ -0.7
LINC00598-215ENST00000638084 KCNH8Q96L42 1107 aa10.66□□□□□ -0.7
LINC00598-215ENST00000638084 FHAD1B1AJZ9 1412 aa10.66□□□□□ -0.7
LINC00598-215ENST00000638084 MYT1Q01538 1121 aa10.65□□□□□ -0.71
LINC00598-215ENST00000638084 SIN3AQ96ST3 1273 aa10.65□□□□□ -0.71
LINC00598-215ENST00000638084 CFAP43Q8NDM7 1665 aa10.63□□□□□ -0.71
LINC00598-215ENST00000638084 WDR97A6NE52 1622 aa10.63□□□□□ -0.71
LINC00598-215ENST00000638084 PCF11O94913 1555 aaKnown RBP10.63□□□□□ -0.71
LINC00598-215ENST00000638084 P3H3Q8IVL6 736 aa10.63□□□□□ -0.71
LINC00598-215ENST00000638084 FAM50AQ14320 339 aaKnown RBP10.62□□□□□ -0.71
LINC00598-215ENST00000638084 TIMELESSQ9UNS1 1208 aa10.62□□□□□ -0.71
LINC00598-215ENST00000638084 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.62□□□□□ -0.71
LINC00598-215ENST00000638084 FANCD2Q9BXW9 1451 aa10.62□□□□□ -0.71
LINC00598-215ENST00000638084 PPP1R15AO75807 674 aaPredicted RBP10.61□□□□□ -0.71
LINC00598-215ENST00000638084 ABCA10Q8WWZ4 1543 aa10.61□□□□□ -0.71
LINC00598-215ENST00000638084 RAD54L2Q9Y4B4 1467 aa10.61□□□□□ -0.71
LINC00598-215ENST00000638084 FHOD3Q2V2M9 1422 aa10.61□□□□□ -0.71
LINC00598-215ENST00000638084 CASKIN1Q8WXD9 1431 aa10.61□□□□□ -0.71
LINC00598-215ENST00000638084 AQRO60306 1485 aaKnown RBP eCLIP10.6□□□□□ -0.71
LINC00598-215ENST00000638084 FYCO1Q9BQS8 1478 aa10.59□□□□□ -0.71
LINC00598-215ENST00000638084 DNMBPQ6XZF7 1577 aa10.58□□□□□ -0.72
LINC00598-215ENST00000638084 POLA1P09884 1462 aaPredicted RBP10.58□□□□□ -0.72
LINC00598-215ENST00000638084 DDX10Q13206 875 aaKnown RBP10.57□□□□□ -0.72
LINC00598-215ENST00000638084 EFCAB5A4FU69 1503 aa10.57□□□□□ -0.72
LINC00598-215ENST00000638084 TOPBP1Q92547 1522 aa10.57□□□□□ -0.72
LINC00598-215ENST00000638084 ATP1B4Q9UN42 357 aaPredicted RBP10.55□□□□□ -0.72
LINC00598-215ENST00000638084 TSHZ2Q9NRE2 1034 aa10.54□□□□□ -0.72
LINC00598-215ENST00000638084 PTPRKQ15262 1439 aa10.54□□□□□ -0.72
LINC00598-215ENST00000638084 FGD6Q6ZV73 1430 aa10.54□□□□□ -0.72
LINC00598-215ENST00000638084 SNAPC4Q5SXM2 1469 aa10.54□□□□□ -0.72
LINC00598-215ENST00000638084 CUL7Q14999 1698 aa10.53□□□□□ -0.72
LINC00598-215ENST00000638084 NESP48681 1621 aa10.53□□□□□ -0.72
LINC00598-215ENST00000638084 FMN1Q68DA7 1419 aa10.52□□□□□ -0.73
LINC00598-215ENST00000638084 HIRIP3Q9BW71 556 aaPredicted RBP10.51□□□□□ -0.73
LINC00598-215ENST00000638084 HFM1A2PYH4 1435 aa10.51□□□□□ -0.73
LINC00598-215ENST00000638084 CTTNBP2Q8WZ74 1663 aa10.51□□□□□ -0.73
LINC00598-215ENST00000638084 CCER2I3L3R5 266 aa10.5□□□□□ -0.73
LINC00598-215ENST00000638084 UACAQ9BZF9 1416 aa10.49□□□□□ -0.73
LINC00598-215ENST00000638084 URB2Q14146 1524 aaKnown RBP10.49□□□□□ -0.73
LINC00598-215ENST00000638084 SAMD9Q5K651 1589 aa10.48□□□□□ -0.73
LINC00598-215ENST00000638084 GRIN2BQ13224 1484 aa10.48□□□□□ -0.73
LINC00598-215ENST00000638084 CCDC18Q5T9S5 1454 aa10.48□□□□□ -0.73
LINC00598-215ENST00000638084 NAIPQ13075 1403 aa10.48□□□□□ -0.73
LINC00598-215ENST00000638084 KDM5BQ9UGL1 1544 aa10.47□□□□□ -0.73
LINC00598-215ENST00000638084 MTUS2Q5JR59 1369 aa10.47□□□□□ -0.73
LINC00598-215ENST00000638084 PTPN23Q9H3S7 1636 aa10.47□□□□□ -0.73
LINC00598-215ENST00000638084 LRRIQ1Q96JM4 1722 aa10.47□□□□□ -0.73
LINC00598-215ENST00000638084 TDRD9Q8NDG6 1382 aaKnown RBP10.46□□□□□ -0.73
LINC00598-215ENST00000638084 NCOA2Q15596 1464 aa10.46□□□□□ -0.73
LINC00598-215ENST00000638084 MYOM3Q5VTT5 1437 aa10.46□□□□□ -0.73
LINC00598-215ENST00000638084 ABCA5Q8WWZ7 1642 aa10.45□□□□□ -0.74
LINC00598-215ENST00000638084 TONSLQ96HA7 1378 aa10.45□□□□□ -0.74
LINC00598-215ENST00000638084 FKBP8Q14318 412 aa10.45□□□□□ -0.74
LINC00598-215ENST00000638084 ARHGEF11O15085 1522 aa10.44□□□□□ -0.74
LINC00598-215ENST00000638084 ANP32CO43423 234 aa10.44□□□□□ -0.74
LINC00598-215ENST00000638084 GAPVD1Q14C86 1478 aa10.43□□□□□ -0.74
LINC00598-215ENST00000638084 THOC2Q8NI27 1593 aaKnown RBP10.43□□□□□ -0.74
LINC00598-215ENST00000638084 MAGI3Q5TCQ9 1506 aa10.42□□□□□ -0.74
LINC00598-215ENST00000638084 LAMC3Q9Y6N6 1575 aa10.42□□□□□ -0.74
LINC00598-215ENST00000638084 BCANQ96GW7 911 aa10.42□□□□□ -0.74
LINC00598-215ENST00000638084 DENND4BO75064 1496 aaPredicted RBP10.42□□□□□ -0.74
LINC00598-215ENST00000638084 UGGT2Q9NYU1 1516 aa10.42□□□□□ -0.74
LINC00598-215ENST00000638084 TRIM52Q96A61 297 aa10.41□□□□□ -0.74
LINC00598-215ENST00000638084 TCOF1Q13428 1488 aaKnown RBP10.4□□□□□ -0.74
LINC00598-215ENST00000638084 EHBP1L1Q8N3D4 1523 aa10.4□□□□□ -0.74
LINC00598-215ENST00000638084 SUPT6HQ7KZ85 1726 aaKnown RBP10.39□□□□□ -0.75
LINC00598-215ENST00000638084 RRP7BPQ9NSQ0 103 aa10.37□□□□□ -0.75
LINC00598-215ENST00000638084 WASHC2AQ641Q2 1341 aa10.36□□□□□ -0.75
LINC00598-215ENST00000638084 TARBP1Q13395 1621 aaKnown RBP10.36□□□□□ -0.75
LINC00598-215ENST00000638084 AKNAQ7Z591 1439 aa10.36□□□□□ -0.75
LINC00598-215ENST00000638084 HSPA5P11021 654 aaKnown RBP10.35□□□□□ -0.75
LINC00598-215ENST00000638084 KDM6BO15054 1643 aa10.35□□□□□ -0.75
LINC00598-215ENST00000638084 PDS5BQ9NTI5 1447 aa10.35□□□□□ -0.75
LINC00598-215ENST00000638084 ANP32EQ9BTT0 268 aa10.35□□□□□ -0.75
LINC00598-215ENST00000638084 CHIC2Q9UKJ5 165 aa10.34□□□□□ -0.75
LINC00598-215ENST00000638084 GCC2Q8IWJ2 1684 aa10.33□□□□□ -0.76
LINC00598-215ENST00000638084 EPRSP07814 1512 aaKnown RBP10.33□□□□□ -0.76
LINC00598-215ENST00000638084 KIF21AQ7Z4S6 1674 aa10.33□□□□□ -0.76
LINC00598-215ENST00000638084 NEFLP07196 543 aa10.33□□□□□ -0.76
LINC00598-215ENST00000638084 MIA2Q96PC5 1412 aa10.33□□□□□ -0.76
LINC00598-215ENST00000638084 HECW1Q76N89 1606 aa10.32□□□□□ -0.76
LINC00598-215ENST00000638084 MPHOSPH9Q99550 1183 aa10.32□□□□□ -0.76
LINC00598-215ENST00000638084 RBM19Q9Y4C8 960 aaKnown RBP10.32□□□□□ -0.76
LINC00598-215ENST00000638084 C11orf95C9JLR9 678 aaPredicted RBP10.31□□□□□ -0.76
LINC00598-215ENST00000638084 L3MBTL2Q969R5 705 aa10.31□□□□□ -0.76
LINC00598-215ENST00000638084 CDK13Q14004 1512 aaKnown RBP10.3□□□□□ -0.76
LINC00598-215ENST00000638084 CCDC184Q52MB2 194 aa10.3□□□□□ -0.76
LINC00598-215ENST00000638084 WDR62O43379 1518 aa10.29□□□□□ -0.76
LINC00598-215ENST00000638084 EIF4G2P78344 907 aaKnown RBP eCLIP10.29□□□□□ -0.76
LINC00598-215ENST00000638084 ANKRD30BQ9BXX2 1392 aa10.29□□□□□ -0.76
LINC00598-215ENST00000638084 ERCC6Q03468 1493 aa10.29□□□□□ -0.76
LINC00598-215ENST00000638084 IQGAP2Q13576 1575 aa10.29□□□□□ -0.76
LINC00598-215ENST00000638084 HNRNPUQ00839 825 aaKnown RBP eCLIP10.28□□□□□ -0.76
LINC00598-215ENST00000638084 FOXD1Q16676 465 aa10.28□□□□□ -0.76
LINC00598-215ENST00000638084 NBPF8Q3BBV2 869 aa10.28□□□□□ -0.76
LINC00598-215ENST00000638084 NCOA1Q15788 1441 aa10.28□□□□□ -0.76
LINC00598-215ENST00000638084 ROCK1Q13464 1354 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms