RNA–Protein interactions for RNA: ENST00000638084.1

LINC00598-215, long intergenic non-protein coding RNA 598, humanhuman

TSL 5 BASIC

Gene LINC00598, Length 1,974 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-215ENST00000638084 NISCHQ9Y2I1 1504 aa15.14■□□□□ 0.01
LINC00598-215ENST00000638084 SHROOM4Q9ULL8 1493 aa12.92□□□□□ -0.34
LINC00598-215ENST00000638084 ZCCHC6Q5VYS8 1495 aaKnown RBP12.83□□□□□ -0.36
LINC00598-215ENST00000638084 CCDC180Q9P1Z9 1646 aa12.77□□□□□ -0.36
LINC00598-215ENST00000638084 SUPT5HO00267 1087 aaKnown RBP12.73□□□□□ -0.37
LINC00598-215ENST00000638084 CHIC1Q5VXU3 224 aa12.52□□□□□ -0.41
LINC00598-215ENST00000638084 MYO15BQ96JP2 1530 aa12.48□□□□□ -0.41
LINC00598-215ENST00000638084 DCAF1Q9Y4B6 1507 aa12.44□□□□□ -0.42
LINC00598-215ENST00000638084 DCAF8L2P0C7V8 631 aa12.43□□□□□ -0.42
LINC00598-215ENST00000638084 HRCP23327 699 aa12.3□□□□□ -0.44
LINC00598-215ENST00000638084 PCGF6Q9BYE7 350 aa12.17□□□□□ -0.46
LINC00598-215ENST00000638084 LOC105371045A0A1W2PR82 267 aa12.13□□□□□ -0.47
LINC00598-215ENST00000638084 ABCC9O60706 1549 aa12.1□□□□□ -0.47
LINC00598-215ENST00000638084 RSF1Q96T23 1441 aaPredicted RBP12.04□□□□□ -0.48
LINC00598-215ENST00000638084 PPARGC1BQ86YN6 1023 aaKnown RBP12.01□□□□□ -0.49
LINC00598-215ENST00000638084 SCRIBQ14160 1630 aa11.97□□□□□ -0.49
LINC00598-215ENST00000638084 TRIM26Q12899 539 aaPredicted RBP11.94□□□□□ -0.5
LINC00598-215ENST00000638084 RB1CC1Q8TDY2 1594 aa11.89□□□□□ -0.51
LINC00598-215ENST00000638084 TRIM41Q8WV44 630 aa11.86□□□□□ -0.51
LINC00598-215ENST00000638084 CECR2Q9BXF3 1484 aa11.82□□□□□ -0.52
LINC00598-215ENST00000638084 NACADO15069 1562 aa11.8□□□□□ -0.52
LINC00598-215ENST00000638084 MROH2BQ7Z745 1585 aa11.78□□□□□ -0.52
LINC00598-215ENST00000638084 FAM9AQ8IZU1 332 aaPredicted RBP11.75□□□□□ -0.53
LINC00598-215ENST00000638084 ZEB1P37275 1124 aaPredicted RBP11.7□□□□□ -0.54
LINC00598-215ENST00000638084 WIZO95785 1651 aa11.69□□□□□ -0.54
LINC00598-215ENST00000638084 EIF4G1Q04637 1599 aaKnown RBP11.63□□□□□ -0.55
LINC00598-215ENST00000638084 BAZ1AQ9NRL2 1556 aaPredicted RBP11.62□□□□□ -0.55
LINC00598-215ENST00000638084 EHMT2Q96KQ7 1210 aa11.61□□□□□ -0.55
LINC00598-215ENST00000638084 TOP2AP11388 1531 aaKnown RBP11.51□□□□□ -0.57
LINC00598-215ENST00000638084 CCDC88BA6NC98 1476 aa11.5□□□□□ -0.57
LINC00598-215ENST00000638084 SMARCA4P51532 1647 aa11.48□□□□□ -0.57
LINC00598-215ENST00000638084 SMARCA2P51531 1590 aa11.47□□□□□ -0.57
LINC00598-215ENST00000638084 ABCC8Q09428 1581 aa11.47□□□□□ -0.57
LINC00598-215ENST00000638084 WRNQ14191 1432 aaPredicted RBP eCLIP11.45□□□□□ -0.58
LINC00598-215ENST00000638084 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.43□□□□□ -0.58
LINC00598-215ENST00000638084 SOGA1O94964 1423 aa11.41□□□□□ -0.58
LINC00598-215ENST00000638084 UNC13AQ9UPW8 1703 aa11.4□□□□□ -0.58
LINC00598-215ENST00000638084 SCAF1Q9H7N4 1312 aaKnown RBP11.39□□□□□ -0.59
LINC00598-215ENST00000638084 TNIKQ9UKE5 1360 aa11.39□□□□□ -0.59
LINC00598-215ENST00000638084 CEP162Q5TB80 1403 aa11.38□□□□□ -0.59
LINC00598-215ENST00000638084 RUSC2Q8N2Y8 1516 aa11.37□□□□□ -0.59
LINC00598-215ENST00000638084 CCER1Q8TC90 406 aaPredicted RBP11.36□□□□□ -0.59
LINC00598-215ENST00000638084 CSRNP3Q8WYN3 585 aa11.36□□□□□ -0.59
LINC00598-215ENST00000638084 EEA1Q15075 1411 aa11.35□□□□□ -0.59
LINC00598-215ENST00000638084 BICRAQ9NZM4 1560 aa11.31□□□□□ -0.6
LINC00598-215ENST00000638084 PEG3Q9GZU2 1588 aa11.29□□□□□ -0.6
LINC00598-215ENST00000638084 PABPN1Q86U42 306 aaKnown RBP eCLIP11.27□□□□□ -0.61
LINC00598-215ENST00000638084 TTBK1Q5TCY1 1321 aaPredicted RBP11.26□□□□□ -0.61
LINC00598-215ENST00000638084 GOLGA3Q08378 1498 aa11.26□□□□□ -0.61
LINC00598-215ENST00000638084 UBTFP17480 764 aaKnown RBP11.26□□□□□ -0.61
LINC00598-215ENST00000638084 ACIN1Q9UKV3 1341 aaKnown RBP11.24□□□□□ -0.61
LINC00598-215ENST00000638084 DIEXFQ68CQ4 756 aaKnown RBP11.23□□□□□ -0.61
LINC00598-215ENST00000638084 NEUROD1Q13562 356 aa11.22□□□□□ -0.61
LINC00598-215ENST00000638084 PELP1Q8IZL8 1130 aaKnown RBP11.22□□□□□ -0.61
LINC00598-215ENST00000638084 SYNJ1O43426 1573 aa11.22□□□□□ -0.61
LINC00598-215ENST00000638084 CEP164Q9UPV0 1460 aa11.19□□□□□ -0.62
LINC00598-215ENST00000638084 KIF21BO75037 1637 aa11.19□□□□□ -0.62
LINC00598-215ENST00000638084 ATAD2BQ9ULI0 1458 aa11.19□□□□□ -0.62
LINC00598-215ENST00000638084 CLIP1P30622 1438 aa11.15□□□□□ -0.62
LINC00598-215ENST00000638084 ZNF316A6NFI3 1004 aaPredicted RBP11.14□□□□□ -0.63
LINC00598-215ENST00000638084 BAZ1BQ9UIG0 1483 aaKnown RBP11.13□□□□□ -0.63
LINC00598-215ENST00000638084 VPS8Q8N3P4 1428 aa11.12□□□□□ -0.63
LINC00598-215ENST00000638084 RAPGEF2Q9Y4G8 1499 aa11.12□□□□□ -0.63
LINC00598-215ENST00000638084 HNRNPUL2Q1KMD3 747 aaKnown RBP11.09□□□□□ -0.63
LINC00598-215ENST00000638084 GTF3C3Q9Y5Q9 886 aa11.09□□□□□ -0.63
LINC00598-215ENST00000638084 CENPBP07199 599 aaPredicted RBP11.08□□□□□ -0.64
LINC00598-215ENST00000638084 TOP2BQ02880 1626 aa11.07□□□□□ -0.64
LINC00598-215ENST00000638084 PRXQ9BXM0 1461 aa11.03□□□□□ -0.64
LINC00598-215ENST00000638084 BIVM-ERCC5R4GMW8 1640 aa11.02□□□□□ -0.65
LINC00598-215ENST00000638084 MIER1Q8N108 512 aa11.01□□□□□ -0.65
LINC00598-215ENST00000638084 ERICH3Q5RHP9 1530 aa10.99□□□□□ -0.65
LINC00598-215ENST00000638084 APLP2Q06481 763 aa10.99□□□□□ -0.65
LINC00598-215ENST00000638084 AEBP2Q6ZN18 517 aaPredicted RBP10.99□□□□□ -0.65
LINC00598-215ENST00000638084 ARAP1Q96P48 1450 aa10.99□□□□□ -0.65
LINC00598-215ENST00000638084 RANGAP1P46060 587 aaPredicted RBP10.97□□□□□ -0.65
LINC00598-215ENST00000638084 NCAPD3P42695 1498 aa10.97□□□□□ -0.65
LINC00598-215ENST00000638084 KANK4Q5T7N3 995 aaPredicted RBP10.96□□□□□ -0.66
LINC00598-215ENST00000638084 CUX1P39880 1505 aa10.95□□□□□ -0.66
LINC00598-215ENST00000638084 CLSPNQ9HAW4 1339 aa10.95□□□□□ -0.66
LINC00598-215ENST00000638084 DHX57Q6P158 1386 aaKnown RBP10.94□□□□□ -0.66
LINC00598-215ENST00000638084 HMGXB3Q12766 1538 aa10.94□□□□□ -0.66
LINC00598-215ENST00000638084 YTHDC1Q96MU7 727 aaKnown RBP10.92□□□□□ -0.66
LINC00598-215ENST00000638084 RRBP1Q9P2E9 1410 aaKnown RBP10.91□□□□□ -0.66
LINC00598-215ENST00000638084 CFTRP13569 1480 aa10.9□□□□□ -0.66
LINC00598-215ENST00000638084 DNAJC5BQ9UF47 199 aa10.9□□□□□ -0.66
LINC00598-215ENST00000638084 KIF27Q86VH2 1401 aa10.89□□□□□ -0.67
LINC00598-215ENST00000638084 CUX2O14529 1486 aa10.88□□□□□ -0.67
LINC00598-215ENST00000638084 ARHGAP35Q9NRY4 1499 aa10.87□□□□□ -0.67
LINC00598-215ENST00000638084 IGF1RP08069 1367 aa10.84□□□□□ -0.67
LINC00598-215ENST00000638084 CCNB3Q8WWL7 1395 aa10.82□□□□□ -0.68
LINC00598-215ENST00000638084 MAP3K1Q13233 1512 aa10.78□□□□□ -0.68
LINC00598-215ENST00000638084 CC2D2AQ9P2K1 1620 aa10.77□□□□□ -0.69
LINC00598-215ENST00000638084 CARMIL1Q5VZK9 1371 aa10.75□□□□□ -0.69
LINC00598-215ENST00000638084 MAPKBP1O60336 1514 aa10.75□□□□□ -0.69
LINC00598-215ENST00000638084 RAB3GAP2Q9H2M9 1393 aa10.75□□□□□ -0.69
LINC00598-215ENST00000638084 CADPSQ9ULU8 1353 aa10.75□□□□□ -0.69
LINC00598-215ENST00000638084 TIAM1Q13009 1591 aa10.74□□□□□ -0.69
LINC00598-215ENST00000638084 PRDM2Q13029 1718 aa10.74□□□□□ -0.69
LINC00598-215ENST00000638084 ITGAEP38570 1179 aa10.72□□□□□ -0.69
LINC00598-215ENST00000638084 LRRC9Q6ZRR7 1453 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms