RNA–Protein interactions for RNA: ENST00000636400.2

TCF4-278, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,343 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-278ENST00000636400 CHGAP10645 457 aaKnown RBP9.09□□□□□ -0.95
TCF4-278ENST00000636400 EIF4G2P78344 907 aaKnown RBP eCLIP9.08□□□□□ -0.962e-7■■■■■ 31.9
TCF4-278ENST00000636400 PDS5BQ9NTI5 1447 aa9.08□□□□□ -0.96
TCF4-278ENST00000636400 HNRNPUQ00839 825 aaKnown RBP eCLIP9.07□□□□□ -0.96
TCF4-278ENST00000636400 MYH16Q9H6N6 1097 aa9.06□□□□□ -0.96
TCF4-278ENST00000636400 EIF4G1Q04637 1599 aaKnown RBP9.06□□□□□ -0.96
TCF4-278ENST00000636400 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.06□□□□□ -0.96
TCF4-278ENST00000636400 ABCC8Q09428 1581 aa9.05□□□□□ -0.96
TCF4-278ENST00000636400 ARHGAP35Q9NRY4 1499 aa9.04□□□□□ -0.96
TCF4-278ENST00000636400 KAT6BQ8WYB5 2073 aa9.04□□□□□ -0.96
TCF4-278ENST00000636400 FMN1Q68DA7 1419 aa9.04□□□□□ -0.96
TCF4-278ENST00000636400 CFDP1Q9UEE9 299 aaPredicted RBP9.03□□□□□ -0.96
TCF4-278ENST00000636400 KANK1Q14678 1352 aa9.03□□□□□ -0.96
TCF4-278ENST00000636400 CHIC2Q9UKJ5 165 aa9.03□□□□□ -0.96
TCF4-278ENST00000636400 MROH2BQ7Z745 1585 aa9.03□□□□□ -0.96
TCF4-278ENST00000636400 CUX2O14529 1486 aa9.03□□□□□ -0.96
TCF4-278ENST00000636400 CARMIL2Q6F5E8 1435 aa9.02□□□□□ -0.96
TCF4-278ENST00000636400 DDX10Q13206 875 aaKnown RBP9.01□□□□□ -0.97
TCF4-278ENST00000636400 CCDC88BA6NC98 1476 aa9.01□□□□□ -0.97
TCF4-278ENST00000636400 PRDM2Q13029 1718 aa9.01□□□□□ -0.97
TCF4-278ENST00000636400 PPP1R15AO75807 674 aaPredicted RBP9□□□□□ -0.97
TCF4-278ENST00000636400 CCNB3Q8WWL7 1395 aa9□□□□□ -0.97
TCF4-278ENST00000636400 CCDC136Q96JN2 1154 aa9□□□□□ -0.97
TCF4-278ENST00000636400 MRS2Q9HD23 443 aa9□□□□□ -0.97
TCF4-278ENST00000636400 CFAP53Q96M91 514 aa9□□□□□ -0.97
TCF4-278ENST00000636400 FAM9BQ8IZU0 186 aa8.99□□□□□ -0.97
TCF4-278ENST00000636400 CECR2Q9BXF3 1484 aa8.99□□□□□ -0.97
TCF4-278ENST00000636400 CARMIL1Q5VZK9 1371 aa8.99□□□□□ -0.97
TCF4-278ENST00000636400 VPS8Q8N3P4 1428 aa8.99□□□□□ -0.97
TCF4-278ENST00000636400 NPM2Q86SE8 214 aaKnown RBP8.98□□□□□ -0.97
TCF4-278ENST00000636400 TIMELESSQ9UNS1 1208 aa8.98□□□□□ -0.97
TCF4-278ENST00000636400 ANP32EQ9BTT0 268 aa8.97□□□□□ -0.97
TCF4-278ENST00000636400 CHMP4BQ9H444 224 aaKnown RBP8.97□□□□□ -0.97
TCF4-278ENST00000636400 FKBP8Q14318 412 aa8.97□□□□□ -0.97
TCF4-278ENST00000636400 KNSTRNQ9Y448 316 aa8.97□□□□□ -0.97
TCF4-278ENST00000636400 KDM2AQ9Y2K7 1162 aa8.97□□□□□ -0.97
TCF4-278ENST00000636400 PNNQ9H307 717 aaKnown RBP8.97□□□□□ -0.97
TCF4-278ENST00000636400 CCDC18Q5T9S5 1454 aa8.95□□□□□ -0.98
TCF4-278ENST00000636400 RRP7BPQ9NSQ0 103 aa8.95□□□□□ -0.98
TCF4-278ENST00000636400 HDGFP51858 240 aaKnown RBP8.95□□□□□ -0.98
TCF4-278ENST00000636400 BECN1Q14457 450 aa8.94□□□□□ -0.98
TCF4-278ENST00000636400 BCL11AQ9H165 835 aa8.94□□□□□ -0.98
TCF4-278ENST00000636400 UNC13AQ9UPW8 1703 aa8.94□□□□□ -0.98
TCF4-278ENST00000636400 DDRGK1Q96HY6 314 aa8.93□□□□□ -0.98
TCF4-278ENST00000636400 KCNH8Q96L42 1107 aa8.93□□□□□ -0.98
TCF4-278ENST00000636400 CASC1Q6TDU7 716 aa8.92□□□□□ -0.98
TCF4-278ENST00000636400 MS4A1P11836 297 aa8.92□□□□□ -0.98
TCF4-278ENST00000636400 SOGA1O94964 1423 aa8.91□□□□□ -0.98
TCF4-278ENST00000636400 C14orf37Q86TY3 774 aa8.9□□□□□ -0.98
TCF4-278ENST00000636400 SETD5Q9C0A6 1442 aa8.9□□□□□ -0.98
TCF4-278ENST00000636400 ARID4BQ4LE39 1312 aaPredicted RBP8.9□□□□□ -0.99
TCF4-278ENST00000636400 NUDCQ9Y266 331 aa8.9□□□□□ -0.99
TCF4-278ENST00000636400 CARD11Q9BXL7 1154 aa8.89□□□□□ -0.99
TCF4-278ENST00000636400 RAPGEF2Q9Y4G8 1499 aa8.89□□□□□ -0.99
TCF4-278ENST00000636400 CUX1P39880 1505 aa8.89□□□□□ -0.99
TCF4-278ENST00000636400 EIF3AQ14152 1382 aaKnown RBP8.88□□□□□ -0.99
TCF4-278ENST00000636400 HAP1P54257 671 aaPredicted RBP8.88□□□□□ -0.99
TCF4-278ENST00000636400 GOLGA6L22H0YM25 854 aa8.88□□□□□ -0.99
TCF4-278ENST00000636400 FTSJ3Q8IY81 847 aaKnown RBP8.87□□□□□ -0.99
TCF4-278ENST00000636400 PLPPR3Q6T4P5 718 aa8.87□□□□□ -0.99
TCF4-278ENST00000636400 RSPH4AQ5TD94 716 aa8.87□□□□□ -0.99
TCF4-278ENST00000636400 SCAF1Q9H7N4 1312 aaKnown RBP8.86□□□□□ -0.99
TCF4-278ENST00000636400 MAPK8IP3Q9UPT6 1336 aa8.86□□□□□ -0.99
TCF4-278ENST00000636400 CFAP44Q96MT7 982 aa8.86□□□□□ -0.99
TCF4-278ENST00000636400 GLIPR1L2Q4G1C9 344 aa8.86□□□□□ -0.99
TCF4-278ENST00000636400 KIF21BO75037 1637 aa8.86□□□□□ -0.99
TCF4-278ENST00000636400 CADPSQ9ULU8 1353 aa8.85□□□□□ -0.99
TCF4-278ENST00000636400 ATAD2BQ9ULI0 1458 aa8.85□□□□□ -0.99
TCF4-278ENST00000636400 TMF1P82094 1093 aa8.85□□□□□ -0.99
TCF4-278ENST00000636400 POGKQ9P215 609 aa8.84□□□□□ -0.99
TCF4-278ENST00000636400 ANKRD30AQ9BXX3 1397 aa8.84□□□□□ -0.99
TCF4-278ENST00000636400 NCLP19338 710 aaKnown RBP8.84□□□□□ -0.99
TCF4-278ENST00000636400 CDK11BP21127 795 aaKnown RBP8.84□□□□□ -0.99
TCF4-278ENST00000636400 SALL2Q9Y467 1007 aaPredicted RBP8.84□□□□□ -0.99
TCF4-278ENST00000636400 CHMP4AQ9BY43 222 aa8.83□□□□□ -1
TCF4-278ENST00000636400 RGL3Q3MIN7 710 aa8.83□□□□□ -1
TCF4-278ENST00000636400 SUPT6HQ7KZ85 1726 aaKnown RBP8.82□□□□□ -1
TCF4-278ENST00000636400 MIER1Q8N108 512 aa8.81□□□□□ -1
TCF4-278ENST00000636400 FANCD2Q9BXW9 1451 aa8.81□□□□□ -1
TCF4-278ENST00000636400 UACAQ9BZF9 1416 aa8.81□□□□□ -1
TCF4-278ENST00000636400 ERICH3Q5RHP9 1530 aa8.8□□□□□ -1
TCF4-278ENST00000636400 CALD1Q05682 793 aaKnown RBP8.8□□□□□ -1
TCF4-278ENST00000636400 ROCK2O75116 1388 aaKnown RBP8.8□□□□□ -1
TCF4-278ENST00000636400 ZRSR1Q15695 479 aaKnown RBP8.79□□□□□ -1
TCF4-278ENST00000636400 CUL7Q14999 1698 aa8.78□□□□□ -1
TCF4-278ENST00000636400 CCER2I3L3R5 266 aa8.78□□□□□ -1
TCF4-278ENST00000636400 KTN1Q86UP2 1357 aaKnown RBP8.78□□□□□ -1
TCF4-278ENST00000636400 EFCAB2Q5VUJ9 269 aa8.77□□□□□ -1.01
TCF4-278ENST00000636400 PHLDB1Q86UU1 1377 aa8.77□□□□□ -1.01
TCF4-278ENST00000636400 HMGXB3Q12766 1538 aa8.77□□□□□ -1.01
TCF4-278ENST00000636400 DCAF11Q8TEB1 546 aa8.76□□□□□ -1.01
TCF4-278ENST00000636400 ERICH6BQ5W0A0 696 aa8.76□□□□□ -1.01
TCF4-278ENST00000636400 TRIM44Q96DX7 344 aaPredicted RBP8.76□□□□□ -1.01
TCF4-278ENST00000636400 EFCAB5A4FU69 1503 aa8.75□□□□□ -1.01
TCF4-278ENST00000636400 GAPVD1Q14C86 1478 aa8.75□□□□□ -1.01
TCF4-278ENST00000636400 PPM1GO15355 546 aaPredicted RBP8.75□□□□□ -1.01
TCF4-278ENST00000636400 TOP2BQ02880 1626 aa8.75□□□□□ -1.01
TCF4-278ENST00000636400 RALBP1Q15311 655 aa8.74□□□□□ -1.01
TCF4-278ENST00000636400 A0A0G2JS52 829 aa8.74□□□□□ -1.01
TCF4-278ENST00000636400 HECW1Q76N89 1606 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms