RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 CLASP1Q7Z460 1538 aa14.05□□□□□ -0.16
CDKL5-209ENST00000635828 UBTFP17480 764 aaKnown RBP14.03□□□□□ -0.16
CDKL5-209ENST00000635828 KIF21BO75037 1637 aa14.03□□□□□ -0.16
CDKL5-209ENST00000635828 TTBK1Q5TCY1 1321 aaPredicted RBP14.02□□□□□ -0.16
CDKL5-209ENST00000635828 DNAJC5Q9H3Z4 198 aa14.02□□□□□ -0.17
CDKL5-209ENST00000635828 JPH4Q96JJ6 628 aa14□□□□□ -0.17
CDKL5-209ENST00000635828 P3H3Q8IVL6 736 aa13.99□□□□□ -0.17
CDKL5-209ENST00000635828 CTTNBP2Q8WZ74 1663 aa13.99□□□□□ -0.17
CDKL5-209ENST00000635828 GOLGA3Q08378 1498 aa13.97□□□□□ -0.17
CDKL5-209ENST00000635828 KIAA0586Q9BVV6 1533 aa13.97□□□□□ -0.17
CDKL5-209ENST00000635828 IQGAP2Q13576 1575 aa13.97□□□□□ -0.17
CDKL5-209ENST00000635828 ARHGEF11O15085 1522 aa13.96□□□□□ -0.18
CDKL5-209ENST00000635828 RIMBP3CA6NJZ7 1639 aa13.96□□□□□ -0.18
CDKL5-209ENST00000635828 RIMBP3BA6NNM3 1639 aa13.96□□□□□ -0.18
CDKL5-209ENST00000635828 RIMBP3Q9UFD9 1639 aa13.96□□□□□ -0.18
CDKL5-209ENST00000635828 PRG4Q92954 1404 aaPredicted RBP13.95□□□□□ -0.18
CDKL5-209ENST00000635828 SHROOM2Q13796 1616 aa13.94□□□□□ -0.18
CDKL5-209ENST00000635828 DISP1Q96F81 1524 aa13.91□□□□□ -0.18
CDKL5-209ENST00000635828 CYB5RLQ6IPT4 315 aa13.91□□□□□ -0.18
CDKL5-209ENST00000635828 ARAP1Q96P48 1450 aa13.89□□□□□ -0.19
CDKL5-209ENST00000635828 UGGT2Q9NYU1 1516 aa13.86□□□□□ -0.19
CDKL5-209ENST00000635828 FHOD3Q2V2M9 1422 aa13.86□□□□□ -0.19
CDKL5-209ENST00000635828 KIAA0556O60303 1618 aa13.85□□□□□ -0.19
CDKL5-209ENST00000635828 ARID3CA6NKF2 412 aa13.84□□□□□ -0.19
CDKL5-209ENST00000635828 TNIKQ9UKE5 1360 aa13.84□□□□□ -0.19
CDKL5-209ENST00000635828 ARHGAP35Q9NRY4 1499 aa13.83□□□□□ -0.19
CDKL5-209ENST00000635828 SAMD9Q5K651 1589 aa13.82□□□□□ -0.2
CDKL5-209ENST00000635828 CEP162Q5TB80 1403 aa13.81□□□□□ -0.2
CDKL5-209ENST00000635828 PLB1Q6P1J6 1458 aa13.79□□□□□ -0.2
CDKL5-209ENST00000635828 CLIP1P30622 1438 aa13.78□□□□□ -0.2
CDKL5-209ENST00000635828 CARMIL2Q6F5E8 1435 aa13.77□□□□□ -0.2
CDKL5-209ENST00000635828 PTPRGP23470 1445 aa13.77□□□□□ -0.21
CDKL5-209ENST00000635828 ADCY10Q96PN6 1610 aa13.74□□□□□ -0.21
CDKL5-209ENST00000635828 ATP1B4Q9UN42 357 aaPredicted RBP13.72□□□□□ -0.21
CDKL5-209ENST00000635828 EFCAB5A4FU69 1503 aa13.7□□□□□ -0.22
CDKL5-209ENST00000635828 LRRIQ1Q96JM4 1722 aa13.69□□□□□ -0.22
CDKL5-209ENST00000635828 UACAQ9BZF9 1416 aa13.67□□□□□ -0.22
CDKL5-209ENST00000635828 ABCA8O94911 1581 aa13.67□□□□□ -0.22
CDKL5-209ENST00000635828 PCF11O94913 1555 aaKnown RBP13.66□□□□□ -0.22
CDKL5-209ENST00000635828 NUP153P49790 1475 aaKnown RBP13.65□□□□□ -0.22
CDKL5-209ENST00000635828 CDK13Q14004 1512 aaKnown RBP13.65□□□□□ -0.22
CDKL5-209ENST00000635828 RAPGEF6Q8TEU7 1601 aa13.65□□□□□ -0.22
CDKL5-209ENST00000635828 ABCC2Q92887 1545 aa13.64□□□□□ -0.23
CDKL5-209ENST00000635828 ZCCHC11Q5TAX3 1644 aaKnown RBP13.62□□□□□ -0.23
CDKL5-209ENST00000635828 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.62□□□□□ -0.23
CDKL5-209ENST00000635828 HNRNPUL2Q1KMD3 747 aaKnown RBP13.62□□□□□ -0.23
CDKL5-209ENST00000635828 PPARGC1BQ86YN6 1023 aaKnown RBP13.61□□□□□ -0.23
CDKL5-209ENST00000635828 ATP10BO94823 1461 aa13.61□□□□□ -0.23
CDKL5-209ENST00000635828 FMN1Q68DA7 1419 aa13.6□□□□□ -0.23
CDKL5-209ENST00000635828 KDM5BQ9UGL1 1544 aa13.57□□□□□ -0.24
CDKL5-209ENST00000635828 UHRF1BP1LA0JNW5 1464 aa13.57□□□□□ -0.24
CDKL5-209ENST00000635828 VPS8Q8N3P4 1428 aa13.57□□□□□ -0.24
CDKL5-209ENST00000635828 KCNH8Q96L42 1107 aa13.56□□□□□ -0.24
CDKL5-209ENST00000635828 EPRSP07814 1512 aaKnown RBP13.56□□□□□ -0.24
CDKL5-209ENST00000635828 CASKIN1Q8WXD9 1431 aa13.56□□□□□ -0.24
CDKL5-209ENST00000635828 MAGI3Q5TCQ9 1506 aa13.56□□□□□ -0.24
CDKL5-209ENST00000635828 ASXL2Q76L83 1435 aa13.55□□□□□ -0.24
CDKL5-209ENST00000635828 NPM1P06748 294 aaKnown RBP eCLIP13.54□□□□□ -0.24
CDKL5-209ENST00000635828 KANK4Q5T7N3 995 aaPredicted RBP13.54□□□□□ -0.24
CDKL5-209ENST00000635828 HECW1Q76N89 1606 aa13.53□□□□□ -0.24
CDKL5-209ENST00000635828 TRHP20396 242 aaPredicted RBP13.53□□□□□ -0.24
CDKL5-209ENST00000635828 FYCO1Q9BQS8 1478 aa13.52□□□□□ -0.24
CDKL5-209ENST00000635828 KIF13AQ9H1H9 1805 aa13.49□□□□□ -0.25
CDKL5-209ENST00000635828 KIF14Q15058 1648 aa13.48□□□□□ -0.25
CDKL5-209ENST00000635828 MAPKBP1O60336 1514 aa13.48□□□□□ -0.25
CDKL5-209ENST00000635828 FAM69CQ0P6D2 419 aa13.48□□□□□ -0.25
CDKL5-209ENST00000635828 TSPOAP1O95153 1857 aa13.47□□□□□ -0.25
CDKL5-209ENST00000635828 WDR7Q9Y4E6 1490 aa13.47□□□□□ -0.25
CDKL5-209ENST00000635828 DIP2BQ9P265 1576 aa13.46□□□□□ -0.26
CDKL5-209ENST00000635828 TIAM1Q13009 1591 aa13.45□□□□□ -0.26
CDKL5-209ENST00000635828 PLEKHD1A6NEE1 506 aa13.45□□□□□ -0.26
CDKL5-209ENST00000635828 ABCC10Q5T3U5 1492 aa13.43□□□□□ -0.26
CDKL5-209ENST00000635828 TTC37Q6PGP7 1564 aa13.43□□□□□ -0.26
CDKL5-209ENST00000635828 CFAP43Q8NDM7 1665 aa13.43□□□□□ -0.26
CDKL5-209ENST00000635828 CCDC18Q5T9S5 1454 aa13.42□□□□□ -0.26
CDKL5-209ENST00000635828 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.41□□□□□ -0.26
CDKL5-209ENST00000635828 MTUS2Q5JR59 1369 aa13.4□□□□□ -0.26
CDKL5-209ENST00000635828 LRRC9Q6ZRR7 1453 aa13.4□□□□□ -0.27
CDKL5-209ENST00000635828 TROQ12816 1431 aaPredicted RBP13.39□□□□□ -0.27
CDKL5-209ENST00000635828 PPRC1Q5VV67 1664 aaKnown RBP13.38□□□□□ -0.27
CDKL5-209ENST00000635828 MAP3K4Q9Y6R4 1608 aa13.36□□□□□ -0.27
CDKL5-209ENST00000635828 APLP2Q06481 763 aa13.36□□□□□ -0.27
CDKL5-209ENST00000635828 CDK11AQ9UQ88 783 aaPredicted RBP13.35□□□□□ -0.27
CDKL5-209ENST00000635828 CD109Q6YHK3 1445 aa13.34□□□□□ -0.27
CDKL5-209ENST00000635828 ABCA9Q8IUA7 1624 aa13.34□□□□□ -0.27
CDKL5-209ENST00000635828 ZNF644Q9H582 1327 aaPredicted RBP13.34□□□□□ -0.27
CDKL5-209ENST00000635828 NCOA2Q15596 1464 aa13.33□□□□□ -0.28
CDKL5-209ENST00000635828 CDC42BPAQ5VT25 1732 aa13.33□□□□□ -0.28
CDKL5-209ENST00000635828 PHLDB1Q86UU1 1377 aa13.33□□□□□ -0.28
CDKL5-209ENST00000635828 CDC42BPBQ9Y5S2 1711 aa13.33□□□□□ -0.28
CDKL5-209ENST00000635828 EHBP1L1Q8N3D4 1523 aa13.32□□□□□ -0.28
CDKL5-209ENST00000635828 GLI2P10070 1586 aa13.31□□□□□ -0.28
CDKL5-209ENST00000635828 ZNF777Q9ULD5 760 aaPredicted RBP13.31□□□□□ -0.28
CDKL5-209ENST00000635828 MAP3K1Q13233 1512 aa13.3□□□□□ -0.28
CDKL5-209ENST00000635828 COL17A1Q9UMD9 1497 aaPredicted RBP13.3□□□□□ -0.28
CDKL5-209ENST00000635828 SUPT6HQ7KZ85 1726 aaKnown RBP13.3□□□□□ -0.28
CDKL5-209ENST00000635828 GPATCH8Q9UKJ3 1502 aaKnown RBP13.3□□□□□ -0.28
CDKL5-209ENST00000635828 MYO5CQ9NQX4 1742 aa13.29□□□□□ -0.28
CDKL5-209ENST00000635828 RAPGEF3O95398 923 aa13.27□□□□□ -0.29
CDKL5-209ENST00000635828 ARHGAP5Q13017 1502 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms