RNA–Protein interactions for RNA: ENST00000635392.1

SMARCA2-240, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 291 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-240ENST00000635392 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.32□□□□□ -0.12
SMARCA2-240ENST00000635392 VSIG10Q8N0Z9 540 aa14.31□□□□□ -0.12
SMARCA2-240ENST00000635392 GABBR2O75899 941 aa14.3□□□□□ -0.12
SMARCA2-240ENST00000635392 PRR29P0C7W0 189 aa14.3□□□□□ -0.12
SMARCA2-240ENST00000635392 TRIM41Q8WV44 630 aa14.3□□□□□ -0.12
SMARCA2-240ENST00000635392 CREBZFQ9NS37 354 aa14.29□□□□□ -0.12
SMARCA2-240ENST00000635392 MNX1P50219 401 aaPredicted RBP14.28□□□□□ -0.12
SMARCA2-240ENST00000635392 PAXIP1Q6ZW49 1069 aaPredicted RBP14.27□□□□□ -0.13
SMARCA2-240ENST00000635392 RNF25Q96BH1 459 aaPredicted RBP14.25□□□□□ -0.13
SMARCA2-240ENST00000635392 GSE1Q14687 1217 aa14.24□□□□□ -0.13
SMARCA2-240ENST00000635392 KDM2AQ9Y2K7 1162 aa14.24□□□□□ -0.13
SMARCA2-240ENST00000635392 CHGAP10645 457 aaKnown RBP14.22□□□□□ -0.13
SMARCA2-240ENST00000635392 CFAP44Q96MT7 982 aa14.2□□□□□ -0.14
SMARCA2-240ENST00000635392 SPRYD3Q8NCJ5 442 aa14.18□□□□□ -0.14
SMARCA2-240ENST00000635392 HS6ST3Q8IZP7 471 aa14.17□□□□□ -0.14
SMARCA2-240ENST00000635392 DNAJC5Q9H3Z4 198 aa14.15□□□□□ -0.14
SMARCA2-240ENST00000635392 DCAF8Q5TAQ9 597 aa14.14□□□□□ -0.15
SMARCA2-240ENST00000635392 TSHZ2Q9NRE2 1034 aa14.13□□□□□ -0.15
SMARCA2-240ENST00000635392 FARP1Q9Y4F1 1045 aaPredicted RBP14.12□□□□□ -0.15
SMARCA2-240ENST00000635392 CD44P16070 742 aaKnown RBP14.1□□□□□ -0.15
SMARCA2-240ENST00000635392 RASEFQ8IZ41 740 aa14.1□□□□□ -0.15
SMARCA2-240ENST00000635392 CHRM1P11229 460 aaPredicted RBP14.09□□□□□ -0.15
SMARCA2-240ENST00000635392 LHX8Q68G74 356 aa14.08□□□□□ -0.16
SMARCA2-240ENST00000635392 RIOK3O14730 519 aaKnown RBP14.07□□□□□ -0.16
SMARCA2-240ENST00000635392 BCANQ96GW7 911 aa14.07□□□□□ -0.16
SMARCA2-240ENST00000635392 FAM212AQ96EL1 285 aa14.06□□□□□ -0.16
SMARCA2-240ENST00000635392 POTEIP0CG38 1075 aa14.03□□□□□ -0.16
SMARCA2-240ENST00000635392 NKX1-1Q15270 411 aaPredicted RBP14.03□□□□□ -0.16
SMARCA2-240ENST00000635392 SGIP1Q9BQI5 828 aa13.97□□□□□ -0.17
SMARCA2-240ENST00000635392 VGFO15240 615 aaPredicted RBP13.96□□□□□ -0.17
SMARCA2-240ENST00000635392 TAOK2Q9UL54 1235 aa13.96□□□□□ -0.17
SMARCA2-240ENST00000635392 GTPBP6O43824 516 aaPredicted RBP13.94□□□□□ -0.18
SMARCA2-240ENST00000635392 PYGBP11216 843 aa13.9□□□□□ -0.18
SMARCA2-240ENST00000635392 STK25O00506 426 aa13.89□□□□□ -0.19
SMARCA2-240ENST00000635392 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.87□□□□□ -0.19
SMARCA2-240ENST00000635392 CLCN6P51797 869 aa13.87□□□□□ -0.19
SMARCA2-240ENST00000635392 ZNF579Q8NAF0 562 aaKnown RBP13.87□□□□□ -0.19
SMARCA2-240ENST00000635392 ZFP91Q96JP5 570 aaPredicted RBP13.87□□□□□ -0.19
SMARCA2-240ENST00000635392 ZRANB1Q9UGI0 708 aa13.87□□□□□ -0.19
SMARCA2-240ENST00000635392 PRKCSHP14314 528 aaPredicted RBP13.86□□□□□ -0.19
SMARCA2-240ENST00000635392 BCL11BQ9C0K0 894 aaPredicted RBP13.83□□□□□ -0.2
SMARCA2-240ENST00000635392 DCBLD2Q96PD2 775 aa13.82□□□□□ -0.2
SMARCA2-240ENST00000635392 STK24Q9Y6E0 443 aa13.79□□□□□ -0.2
SMARCA2-240ENST00000635392 GALR2O43603 387 aaPredicted RBP13.76□□□□□ -0.21
SMARCA2-240ENST00000635392 TSPYL2Q9H2G4 693 aaPredicted RBP13.76□□□□□ -0.21
SMARCA2-240ENST00000635392 CCDC61Q9Y6R9 512 aa13.72□□□□□ -0.21
SMARCA2-240ENST00000635392 ZNF467Q7Z7K2 595 aaPredicted RBP13.7□□□□□ -0.22
SMARCA2-240ENST00000635392 PHF12Q96QT6 1004 aa13.69□□□□□ -0.22
SMARCA2-240ENST00000635392 RYDENQ9NUL5 291 aaKnown RBP13.67□□□□□ -0.22
SMARCA2-240ENST00000635392 PCDHB8Q9UN66 801 aa13.67□□□□□ -0.22
SMARCA2-240ENST00000635392 PCDHB13Q9Y5F0 798 aa13.67□□□□□ -0.22
SMARCA2-240ENST00000635392 TPRNQ4KMQ1 711 aa13.66□□□□□ -0.22
SMARCA2-240ENST00000635392 PDAP1Q13442 181 aaKnown RBP13.65□□□□□ -0.22
SMARCA2-240ENST00000635392 PAK3O75914 559 aaPredicted RBP13.64□□□□□ -0.23
SMARCA2-240ENST00000635392 PSEN1P49768 467 aa13.58□□□□□ -0.24
SMARCA2-240ENST00000635392 POTEB2H3BUK9 544 aa13.57□□□□□ -0.24
SMARCA2-240ENST00000635392 NBR1Q14596 966 aa13.56□□□□□ -0.24
SMARCA2-240ENST00000635392 IFNL1Q8IU54 200 aa13.54□□□□□ -0.24
SMARCA2-240ENST00000635392 PELP1Q8IZL8 1130 aaKnown RBP13.54□□□□□ -0.24
SMARCA2-240ENST00000635392 KIF12Q96FN5 646 aa13.54□□□□□ -0.24
SMARCA2-240ENST00000635392 OTUD5Q96G74 571 aa13.54□□□□□ -0.24
SMARCA2-240ENST00000635392 MFRPQ9BY79 579 aa13.54□□□□□ -0.24
SMARCA2-240ENST00000635392 CADPS2Q86UW7 1296 aa13.53□□□□□ -0.24
SMARCA2-240ENST00000635392 MAP3K13O43283 966 aa13.52□□□□□ -0.25
SMARCA2-240ENST00000635392 MS4A3Q96HJ5 214 aa13.49□□□□□ -0.25
SMARCA2-240ENST00000635392 FBXO22Q8NEZ5 403 aa13.45□□□□□ -0.26
SMARCA2-240ENST00000635392 PPP1R37O75864 691 aa13.42□□□□□ -0.26
SMARCA2-240ENST00000635392 ASTLQ6HA08 431 aaPredicted RBP13.42□□□□□ -0.26
SMARCA2-240ENST00000635392 EFCAB3Q8N7B9 438 aa13.42□□□□□ -0.26
SMARCA2-240ENST00000635392 PLSCR2Q9NRY7 297 aa13.41□□□□□ -0.26
SMARCA2-240ENST00000635392 ATMINO43313 823 aaPredicted RBP13.4□□□□□ -0.26
SMARCA2-240ENST00000635392 SOX12O15370 315 aa13.38□□□□□ -0.27
SMARCA2-240ENST00000635392 CABP2Q9NPB3 220 aa13.38□□□□□ -0.27
SMARCA2-240ENST00000635392 METRNQ9UJH8 293 aa13.38□□□□□ -0.27
SMARCA2-240ENST00000635392 PHF8Q9UPP1 1060 aa13.36□□□□□ -0.27
SMARCA2-240ENST00000635392 NLRP6P59044 892 aa13.35□□□□□ -0.27
SMARCA2-240ENST00000635392 KCNV2Q8TDN2 545 aa13.35□□□□□ -0.27
SMARCA2-240ENST00000635392 POTEJP0CG39 1038 aa13.34□□□□□ -0.27
SMARCA2-240ENST00000635392 P3H3Q8IVL6 736 aa13.34□□□□□ -0.27
SMARCA2-240ENST00000635392 SLC39A7Q92504 469 aa13.33□□□□□ -0.28
SMARCA2-240ENST00000635392 C7P10643 843 aa13.31□□□□□ -0.28
SMARCA2-240ENST00000635392 MS4A4AQ96JQ5 239 aa13.3□□□□□ -0.28
SMARCA2-240ENST00000635392 WDR70Q9NW82 654 aa13.3□□□□□ -0.28
SMARCA2-240ENST00000635392 ATN1P54259 1190 aaPredicted RBP13.29□□□□□ -0.28
SMARCA2-240ENST00000635392 POTEMA6NI47 508 aa13.27□□□□□ -0.29
SMARCA2-240ENST00000635392 TRPC6Q9Y210 931 aa13.26□□□□□ -0.29
SMARCA2-240ENST00000635392 POTEGQ6S5H5 508 aa13.23□□□□□ -0.29
SMARCA2-240ENST00000635392 BMP2KQ9NSY1 1161 aaPredicted RBP13.22□□□□□ -0.29
SMARCA2-240ENST00000635392 NCKAP5LQ9HCH0 1330 aa13.21□□□□□ -0.29
SMARCA2-240ENST00000635392 TMEM106CQ9BVX2 250 aa13.21□□□□□ -0.29
SMARCA2-240ENST00000635392 POTEFA5A3E0 1075 aa13.19□□□□□ -0.3
SMARCA2-240ENST00000635392 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.19□□□□□ -0.3
SMARCA2-240ENST00000635392 ARHGEF1Q92888 912 aaKnown RBP13.19□□□□□ -0.3
SMARCA2-240ENST00000635392 E2F4Q16254 413 aa13.17□□□□□ -0.3
SMARCA2-240ENST00000635392 MAMSTRQ6ZN01 415 aa13.17□□□□□ -0.3
SMARCA2-240ENST00000635392 ILDR1Q86SU0 546 aaPredicted RBP13.16□□□□□ -0.3
SMARCA2-240ENST00000635392 MFSD10Q14728 455 aa13.14□□□□□ -0.31
SMARCA2-240ENST00000635392 CRISPLD2Q9H0B8 497 aa13.14□□□□□ -0.31
SMARCA2-240ENST00000635392 TIE1P35590 1138 aa13.13□□□□□ -0.31
SMARCA2-240ENST00000635392 LCE2DQ5TA82 110 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms