RNA–Protein interactions for RNA: ENST00000630255.2

DDX3X-219, Transcript of DEAD-box helicase 3 X-linked, humanhuman

TSL 5

Gene DDX3X, Length 3,289 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-219ENST00000630255 KIF27Q86VH2 1401 aa14.38□□□□□ -0.11
DDX3X-219ENST00000630255 CFTRP13569 1480 aa14.37□□□□□ -0.11
DDX3X-219ENST00000630255 KCNA4P22459 653 aa14.31□□□□□ -0.12
DDX3X-219ENST00000630255 WDR97A6NE52 1622 aa14.3□□□□□ -0.12
DDX3X-219ENST00000630255 RAB3GAP2Q9H2M9 1393 aa14.3□□□□□ -0.12
DDX3X-219ENST00000630255 LRRC9Q6ZRR7 1453 aa14.28□□□□□ -0.12
DDX3X-219ENST00000630255 DAXXQ9UER7 740 aaPredicted RBP14.27□□□□□ -0.12
DDX3X-219ENST00000630255 PCF11O94913 1555 aaKnown RBP14.27□□□□□ -0.12
DDX3X-219ENST00000630255 RANGAP1P46060 587 aaPredicted RBP14.26□□□□□ -0.13
DDX3X-219ENST00000630255 TSHZ2Q9NRE2 1034 aa14.26□□□□□ -0.13
DDX3X-219ENST00000630255 SETD5Q9C0A6 1442 aa14.24□□□□□ -0.13
DDX3X-219ENST00000630255 IGF1RP08069 1367 aa14.21□□□□□ -0.14
DDX3X-219ENST00000630255 CTTNBP2Q8WZ74 1663 aa14.2□□□□□ -0.14
DDX3X-219ENST00000630255 PHLDB1Q86UU1 1377 aa14.2□□□□□ -0.14
DDX3X-219ENST00000630255 KCNH8Q96L42 1107 aa14.17□□□□□ -0.14
DDX3X-219ENST00000630255 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.17□□□□□ -0.142e-8■■□□□ 11.4
DDX3X-219ENST00000630255 LRRIQ1Q96JM4 1722 aa14.17□□□□□ -0.14
DDX3X-219ENST00000630255 EFCAB5A4FU69 1503 aa14.16□□□□□ -0.14
DDX3X-219ENST00000630255 FYCO1Q9BQS8 1478 aa14.15□□□□□ -0.14
DDX3X-219ENST00000630255 FHAD1B1AJZ9 1412 aa14.15□□□□□ -0.14
DDX3X-219ENST00000630255 AQRO60306 1485 aaKnown RBP eCLIP14.15□□□□□ -0.145e-7■■■■□ 22.7
DDX3X-219ENST00000630255 FGD5Q6ZNL6 1462 aa14.15□□□□□ -0.14
DDX3X-219ENST00000630255 PPP1R15AO75807 674 aaPredicted RBP14.14□□□□□ -0.15
DDX3X-219ENST00000630255 CC2D2AQ9P2K1 1620 aa14.14□□□□□ -0.15
DDX3X-219ENST00000630255 TIMELESSQ9UNS1 1208 aa14.13□□□□□ -0.15
DDX3X-219ENST00000630255 CUL7Q14999 1698 aa14.12□□□□□ -0.15
DDX3X-219ENST00000630255 ANP32EQ9BTT0 268 aa14.12□□□□□ -0.15
DDX3X-219ENST00000630255 CARMIL1Q5VZK9 1371 aa14.1□□□□□ -0.15
DDX3X-219ENST00000630255 KDM5BQ9UGL1 1544 aa14.1□□□□□ -0.15
DDX3X-219ENST00000630255 PPP6R1Q9UPN7 881 aa14.09□□□□□ -0.15
DDX3X-219ENST00000630255 PTPN23Q9H3S7 1636 aa14.08□□□□□ -0.16
DDX3X-219ENST00000630255 CASKIN1Q8WXD9 1431 aa14.08□□□□□ -0.16
DDX3X-219ENST00000630255 SNAPC4Q5SXM2 1469 aa14.07□□□□□ -0.16
DDX3X-219ENST00000630255 CCER2I3L3R5 266 aa14.07□□□□□ -0.16
DDX3X-219ENST00000630255 SAMD9Q5K651 1589 aa14.06□□□□□ -0.16
DDX3X-219ENST00000630255 DNMBPQ6XZF7 1577 aa14.05□□□□□ -0.16
DDX3X-219ENST00000630255 KIF21AQ7Z4S6 1674 aa14.05□□□□□ -0.16
DDX3X-219ENST00000630255 ABCA10Q8WWZ4 1543 aa14.04□□□□□ -0.16
DDX3X-219ENST00000630255 ITGAEP38570 1179 aa14.04□□□□□ -0.16
DDX3X-219ENST00000630255 GCC2Q8IWJ2 1684 aa14.04□□□□□ -0.16
DDX3X-219ENST00000630255 CADPSQ9ULU8 1353 aa14.04□□□□□ -0.16
DDX3X-219ENST00000630255 SIN3AQ96ST3 1273 aa14.03□□□□□ -0.16
DDX3X-219ENST00000630255 THOC2Q8NI27 1593 aaKnown RBP14.03□□□□□ -0.16
DDX3X-219ENST00000630255 FGD6Q6ZV73 1430 aa14.01□□□□□ -0.17
DDX3X-219ENST00000630255 CCDC18Q5T9S5 1454 aa14.01□□□□□ -0.17
DDX3X-219ENST00000630255 HECW1Q76N89 1606 aa14.01□□□□□ -0.17
DDX3X-219ENST00000630255 DDX10Q13206 875 aaKnown RBP14.01□□□□□ -0.17
DDX3X-219ENST00000630255 HFM1A2PYH4 1435 aa14.01□□□□□ -0.17
DDX3X-219ENST00000630255 FHOD3Q2V2M9 1422 aa14□□□□□ -0.17
DDX3X-219ENST00000630255 UACAQ9BZF9 1416 aa14□□□□□ -0.17
DDX3X-219ENST00000630255 FKBP8Q14318 412 aa13.99□□□□□ -0.17
DDX3X-219ENST00000630255 POLR1AO95602 1720 aaPredicted RBP13.99□□□□□ -0.17
DDX3X-219ENST00000630255 ARHGEF11O15085 1522 aa13.98□□□□□ -0.17
DDX3X-219ENST00000630255 SUPT6HQ7KZ85 1726 aaKnown RBP13.98□□□□□ -0.17
DDX3X-219ENST00000630255 PTPRKQ15262 1439 aa13.98□□□□□ -0.17
DDX3X-219ENST00000630255 ABCA5Q8WWZ7 1642 aa13.96□□□□□ -0.17
DDX3X-219ENST00000630255 POLA1P09884 1462 aaPredicted RBP13.95□□□□□ -0.18
DDX3X-219ENST00000630255 GRIN2BQ13224 1484 aa13.95□□□□□ -0.18
DDX3X-219ENST00000630255 FANCD2Q9BXW9 1451 aa13.94□□□□□ -0.18
DDX3X-219ENST00000630255 TOPBP1Q92547 1522 aa13.94□□□□□ -0.18
DDX3X-219ENST00000630255 FMN1Q68DA7 1419 aa13.94□□□□□ -0.18
DDX3X-219ENST00000630255 EHBP1L1Q8N3D4 1523 aa13.93□□□□□ -0.18
DDX3X-219ENST00000630255 FAM50AQ14320 339 aaKnown RBP13.93□□□□□ -0.18
DDX3X-219ENST00000630255 NAIPQ13075 1403 aa13.93□□□□□ -0.18
DDX3X-219ENST00000630255 NCOA2Q15596 1464 aa13.93□□□□□ -0.18
DDX3X-219ENST00000630255 DENND4BO75064 1496 aaPredicted RBP13.93□□□□□ -0.18
DDX3X-219ENST00000630255 UGGT2Q9NYU1 1516 aa13.93□□□□□ -0.18
DDX3X-219ENST00000630255 BCANQ96GW7 911 aa13.93□□□□□ -0.18
DDX3X-219ENST00000630255 RBM19Q9Y4C8 960 aaKnown RBP13.92□□□□□ -0.18
DDX3X-219ENST00000630255 RAD54L2Q9Y4B4 1467 aa13.91□□□□□ -0.18
DDX3X-219ENST00000630255 EIF5BO60841 1220 aaKnown RBP13.91□□□□□ -0.18
DDX3X-219ENST00000630255 TCOF1Q13428 1488 aaKnown RBP13.9□□□□□ -0.18
DDX3X-219ENST00000630255 ANP32CO43423 234 aa13.9□□□□□ -0.18
DDX3X-219ENST00000630255 MYOM3Q5VTT5 1437 aa13.9□□□□□ -0.19
DDX3X-219ENST00000630255 MAGI3Q5TCQ9 1506 aa13.88□□□□□ -0.19
DDX3X-219ENST00000630255 TONSLQ96HA7 1378 aa13.88□□□□□ -0.19
DDX3X-219ENST00000630255 AKNAQ7Z591 1439 aa13.87□□□□□ -0.19
DDX3X-219ENST00000630255 KDM6BO15054 1643 aa13.87□□□□□ -0.19
DDX3X-219ENST00000630255 TRIM52Q96A61 297 aa13.86□□□□□ -0.19
DDX3X-219ENST00000630255 NEFLP07196 543 aa13.85□□□□□ -0.19
DDX3X-219ENST00000630255 HIRIP3Q9BW71 556 aaPredicted RBP13.85□□□□□ -0.19
DDX3X-219ENST00000630255 LAMC3Q9Y6N6 1575 aa13.84□□□□□ -0.19
DDX3X-219ENST00000630255 MSH5O43196 834 aa13.81□□□□□ -0.2
DDX3X-219ENST00000630255 P3H3Q8IVL6 736 aa13.81□□□□□ -0.2
DDX3X-219ENST00000630255 FANCIQ9NVI1 1328 aa13.81□□□□□ -0.2
DDX3X-219ENST00000630255 FOXD1Q16676 465 aa13.81□□□□□ -0.2
DDX3X-219ENST00000630255 PLEKHG5O94827 1062 aa13.8□□□□□ -0.2
DDX3X-219ENST00000630255 CNTLNQ9NXG0 1405 aa13.8□□□□□ -0.2
DDX3X-219ENST00000630255 URB2Q14146 1524 aaKnown RBP13.79□□□□□ -0.2
DDX3X-219ENST00000630255 MTUS2Q5JR59 1369 aa13.79□□□□□ -0.2
DDX3X-219ENST00000630255 PBRM1Q86U86 1689 aa13.78□□□□□ -0.2
DDX3X-219ENST00000630255 WASHC2AQ641Q2 1341 aa13.78□□□□□ -0.2
DDX3X-219ENST00000630255 NESP48681 1621 aa13.78□□□□□ -0.2
DDX3X-219ENST00000630255 NCOA1Q15788 1441 aa13.77□□□□□ -0.21
DDX3X-219ENST00000630255 ERICH6BQ5W0A0 696 aa13.76□□□□□ -0.21
DDX3X-219ENST00000630255 TARBP1Q13395 1621 aaKnown RBP13.76□□□□□ -0.21
DDX3X-219ENST00000630255 TEX14Q8IWB6 1497 aa13.74□□□□□ -0.21
DDX3X-219ENST00000630255 DNMT1P26358 1616 aaKnown RBP13.73□□□□□ -0.21
DDX3X-219ENST00000630255 WDR62O43379 1518 aa13.73□□□□□ -0.21
DDX3X-219ENST00000630255 MIA2Q96PC5 1412 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms