RNA–Protein interactions for RNA: ENST00000623711.3

RYK-209, Transcript of receptor-like tyrosine kinase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RYK, Length 2,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RYK-209ENST00000623711 HMGXB3Q12766 1538 aa32.23■■■□□ 2.75
RYK-209ENST00000623711 MAPKBP1O60336 1514 aa32.18■■■□□ 2.74
RYK-209ENST00000623711 CARMIL1Q5VZK9 1371 aa32.17■■■□□ 2.74
RYK-209ENST00000623711 CC2D2AQ9P2K1 1620 aa32.1■■■□□ 2.73
RYK-209ENST00000623711 SETD5Q9C0A6 1442 aa32.06■■■□□ 2.72
RYK-209ENST00000623711 WDR97A6NE52 1622 aa32.05■■■□□ 2.72
RYK-209ENST00000623711 FGD5Q6ZNL6 1462 aa32.05■■■□□ 2.72
RYK-209ENST00000623711 TIAM1Q13009 1591 aa32.03■■■□□ 2.72
RYK-209ENST00000623711 FHOD3Q2V2M9 1422 aa32.02■■■□□ 2.72
RYK-209ENST00000623711 LRRC9Q6ZRR7 1453 aa32.02■■■□□ 2.72
RYK-209ENST00000623711 TSHZ2Q9NRE2 1034 aa32.01■■■□□ 2.71
RYK-209ENST00000623711 TRIM52Q96A61 297 aa31.99■■■□□ 2.71
RYK-209ENST00000623711 CADPSQ9ULU8 1353 aa31.94■■■□□ 2.7
RYK-209ENST00000623711 RAD54L2Q9Y4B4 1467 aa31.94■■■□□ 2.7
RYK-209ENST00000623711 FKBP8Q14318 412 aa31.93■■■□□ 2.7
RYK-209ENST00000623711 PCF11O94913 1555 aaKnown RBP31.86■■■□□ 2.69
RYK-209ENST00000623711 DNAJC5BQ9UF47 199 aa31.85■■■□□ 2.69
RYK-209ENST00000623711 PPP1R15AO75807 674 aaPredicted RBP31.83■■■□□ 2.69
RYK-209ENST00000623711 FHAD1B1AJZ9 1412 aa31.72■■■□□ 2.67
RYK-209ENST00000623711 NESP48681 1621 aa31.72■■■□□ 2.67
RYK-209ENST00000623711 ARID3CA6NKF2 412 aa31.71■■■□□ 2.67
RYK-209ENST00000623711 FANCD2Q9BXW9 1451 aa31.7■■■□□ 2.67
RYK-209ENST00000623711 PTPRKQ15262 1439 aa31.67■■■□□ 2.66
RYK-209ENST00000623711 CHIC2Q9UKJ5 165 aa31.66■■■□□ 2.66
RYK-209ENST00000623711 MAP3K1Q13233 1512 aa31.64■■■□□ 2.66
RYK-209ENST00000623711 ANP32CO43423 234 aa31.63■■■□□ 2.65
RYK-209ENST00000623711 TDRD9Q8NDG6 1382 aaKnown RBP31.6■■■□□ 2.65
RYK-209ENST00000623711 TONSLQ96HA7 1378 aa31.6■■■□□ 2.65
RYK-209ENST00000623711 IRX6P78412 446 aaPredicted RBP31.59■■■□□ 2.65
RYK-209ENST00000623711 RRP7BPQ9NSQ0 103 aa31.59■■■□□ 2.65
RYK-209ENST00000623711 MTUS2Q5JR59 1369 aa31.58■■■□□ 2.65
RYK-209ENST00000623711 POLA1P09884 1462 aaPredicted RBP31.58■■■□□ 2.65
RYK-209ENST00000623711 CFAP43Q8NDM7 1665 aa31.54■■■□□ 2.64
RYK-209ENST00000623711 FGD6Q6ZV73 1430 aa31.54■■■□□ 2.64
RYK-209ENST00000623711 PRDM2Q13029 1718 aa31.53■■■□□ 2.64
RYK-209ENST00000623711 AQRO60306 1485 aaKnown RBP eCLIP31.52■■■□□ 2.64
RYK-209ENST00000623711 CASKIN1Q8WXD9 1431 aa31.51■■■□□ 2.63
RYK-209ENST00000623711 CCDC18Q5T9S5 1454 aa31.5■■■□□ 2.63
RYK-209ENST00000623711 FOXD1Q16676 465 aa31.49■■■□□ 2.63
RYK-209ENST00000623711 TOPBP1Q92547 1522 aa31.48■■■□□ 2.63
RYK-209ENST00000623711 FYCO1Q9BQS8 1478 aa31.47■■■□□ 2.63
RYK-209ENST00000623711 NEFLP07196 543 aa31.46■■■□□ 2.63
RYK-209ENST00000623711 ANP32EQ9BTT0 268 aa31.42■■■□□ 2.62
RYK-209ENST00000623711 ABCA10Q8WWZ4 1543 aa31.4■■■□□ 2.62
RYK-209ENST00000623711 HNRNPUQ00839 825 aaKnown RBP eCLIP31.4■■■□□ 2.62
RYK-209ENST00000623711 CNGB1Q14028 1251 aaPredicted RBP31.38■■■□□ 2.61
RYK-209ENST00000623711 TIMELESSQ9UNS1 1208 aa31.38■■■□□ 2.61
RYK-209ENST00000623711 CCER2I3L3R5 266 aa31.37■■■□□ 2.61
RYK-209ENST00000623711 CCDC184Q52MB2 194 aa31.37■■■□□ 2.61
RYK-209ENST00000623711 SNAPC4Q5SXM2 1469 aa31.36■■■□□ 2.61
RYK-209ENST00000623711 RBM19Q9Y4C8 960 aaKnown RBP31.35■■■□□ 2.61
RYK-209ENST00000623711 NAIPQ13075 1403 aa31.35■■■□□ 2.61
RYK-209ENST00000623711 DNMBPQ6XZF7 1577 aa31.34■■■□□ 2.61
RYK-209ENST00000623711 NCOA2Q15596 1464 aa31.33■■■□□ 2.61
RYK-209ENST00000623711 FMN1Q68DA7 1419 aa31.32■■■□□ 2.6
RYK-209ENST00000623711 HSPA5P11021 654 aaKnown RBP31.31■■■□□ 2.6
RYK-209ENST00000623711 HFM1A2PYH4 1435 aa31.3■■■□□ 2.6
RYK-209ENST00000623711 UACAQ9BZF9 1416 aa31.3■■■□□ 2.6
RYK-209ENST00000623711 WASHC2AQ641Q2 1341 aa31.29■■■□□ 2.6
RYK-209ENST00000623711 PTPN23Q9H3S7 1636 aa31.27■■■□□ 2.6
RYK-209ENST00000623711 SENP3-EIF4A1A0A087X0R7 540 aa31.27■■■□□ 2.6
RYK-209ENST00000623711 EFCAB5A4FU69 1503 aa31.27■■■□□ 2.6
RYK-209ENST00000623711 LRRIQ1Q96JM4 1722 aa31.26■■■□□ 2.59
RYK-209ENST00000623711 URB2Q14146 1524 aaKnown RBP31.25■■■□□ 2.59
RYK-209ENST00000623711 C11orf95C9JLR9 678 aaPredicted RBP31.24■■■□□ 2.59
RYK-209ENST00000623711 MYOM3Q5VTT5 1437 aa31.24■■■□□ 2.59
RYK-209ENST00000623711 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.22■■■□□ 2.59
RYK-209ENST00000623711 CTTNBP2Q8WZ74 1663 aa31.2■■■□□ 2.58
RYK-209ENST00000623711 MAGI3Q5TCQ9 1506 aa31.2■■■□□ 2.58
RYK-209ENST00000623711 KDM5BQ9UGL1 1544 aa31.17■■■□□ 2.58
RYK-209ENST00000623711 L3MBTL2Q969R5 705 aa31.16■■■□□ 2.58
RYK-209ENST00000623711 FAM9BQ8IZU0 186 aa31.15■■■□□ 2.58
RYK-209ENST00000623711 GAPVD1Q14C86 1478 aa31.14■■■□□ 2.58
RYK-209ENST00000623711 KDM6BO15054 1643 aa31.14■■■□□ 2.58
RYK-209ENST00000623711 DENND4BO75064 1496 aaPredicted RBP31.13■■■□□ 2.57
RYK-209ENST00000623711 GRIN2BQ13224 1484 aa31.13■■■□□ 2.57
RYK-209ENST00000623711 CUL7Q14999 1698 aa31.11■■■□□ 2.57
RYK-209ENST00000623711 MPHOSPH9Q99550 1183 aa31.1■■■□□ 2.57
RYK-209ENST00000623711 ZNF644Q9H582 1327 aaPredicted RBP31.09■■■□□ 2.57
RYK-209ENST00000623711 LAMC3Q9Y6N6 1575 aa31.08■■■□□ 2.57
RYK-209ENST00000623711 MSH5O43196 834 aa31.07■■■□□ 2.56
RYK-209ENST00000623711 EIF4G2P78344 907 aaKnown RBP eCLIP31.05■■■□□ 2.56
RYK-209ENST00000623711 NBPF8Q3BBV2 869 aa31.04■■■□□ 2.56
RYK-209ENST00000623711 CDK13Q14004 1512 aaKnown RBP31.04■■■□□ 2.56
RYK-209ENST00000623711 POLR3GLQ9BT43 218 aa31.03■■■□□ 2.56
RYK-209ENST00000623711 BCL11AQ9H165 835 aa31.03■■■□□ 2.56
RYK-209ENST00000623711 PDS5BQ9NTI5 1447 aa31.02■■■□□ 2.56
RYK-209ENST00000623711 SAMD9Q5K651 1589 aa31.01■■■□□ 2.55
RYK-209ENST00000623711 SUPT6HQ7KZ85 1726 aaKnown RBP30.97■■■□□ 2.55
RYK-209ENST00000623711 UGGT2Q9NYU1 1516 aa30.96■■■□□ 2.55
RYK-209ENST00000623711 ZNF326Q5BKZ1 582 aaKnown RBP30.96■■■□□ 2.55
RYK-209ENST00000623711 MRS2Q9HD23 443 aa30.95■■■□□ 2.55
RYK-209ENST00000623711 KIF21AQ7Z4S6 1674 aa30.94■■■□□ 2.54
RYK-209ENST00000623711 EHBP1L1Q8N3D4 1523 aa30.92■■■□□ 2.54
RYK-209ENST00000623711 ABCA5Q8WWZ7 1642 aa30.92■■■□□ 2.54
RYK-209ENST00000623711 B4GALNT3Q6L9W6 998 aa30.92■■■□□ 2.54
RYK-209ENST00000623711 PRKRIP1Q9H875 184 aaPredicted RBP30.9■■■□□ 2.54
RYK-209ENST00000623711 SLC4A1APQ9BWU0 796 aaKnown RBP30.87■■■□□ 2.53
RYK-209ENST00000623711 EPRSP07814 1512 aaKnown RBP30.85■■■□□ 2.53
RYK-209ENST00000623711 CCDC7Q96M83 1385 aa30.83■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 640.8 ms