RNA–Protein interactions for RNA: ENST00000622241.1

PRAG1-202, Transcript of PEAK1 related, kinase-activating pseudokinase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRAG1, Length 4,639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAG1-202ENST00000622241 NEFMP07197 916 aa22.5■■□□□ 1.19
PRAG1-202ENST00000622241 CANXP27824 592 aaKnown RBP22.49■■□□□ 1.19
PRAG1-202ENST00000622241 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.48■■□□□ 1.199e-9■□□□□ 9.8
PRAG1-202ENST00000622241 SCAF1Q9H7N4 1312 aaKnown RBP22.47■■□□□ 1.19
PRAG1-202ENST00000622241 SMARCA4P51532 1647 aa22.46■■□□□ 1.19
PRAG1-202ENST00000622241 TMC1Q8TDI8 760 aa22.46■■□□□ 1.19
PRAG1-202ENST00000622241 MRS2Q9HD23 443 aa22.45■■□□□ 1.18
PRAG1-202ENST00000622241 CFDP1Q9UEE9 299 aaPredicted RBP22.43■■□□□ 1.18
PRAG1-202ENST00000622241 CHGAP10645 457 aaKnown RBP22.42■■□□□ 1.18
PRAG1-202ENST00000622241 TIMELESSQ9UNS1 1208 aa22.42■■□□□ 1.18
PRAG1-202ENST00000622241 ATAD2BQ9ULI0 1458 aa22.41■■□□□ 1.18
PRAG1-202ENST00000622241 HIRIP3Q9BW71 556 aaPredicted RBP22.41■■□□□ 1.18
PRAG1-202ENST00000622241 ZBTB47Q9UFB7 747 aaPredicted RBP22.4■■□□□ 1.18
PRAG1-202ENST00000622241 KDM2AQ9Y2K7 1162 aa22.4■■□□□ 1.18
PRAG1-202ENST00000622241 ANP32AP39687 249 aaKnown RBP22.38■■□□□ 1.17
PRAG1-202ENST00000622241 ESF1Q9H501 851 aaKnown RBP22.34■■□□□ 1.17
PRAG1-202ENST00000622241 SIN3AQ96ST3 1273 aa22.3■■□□□ 1.16
PRAG1-202ENST00000622241 CADPSQ9ULU8 1353 aa22.3■■□□□ 1.16
PRAG1-202ENST00000622241 PDS5BQ9NTI5 1447 aa22.3■■□□□ 1.16
PRAG1-202ENST00000622241 STAG3Q9UJ98 1225 aa22.3■■□□□ 1.16
PRAG1-202ENST00000622241 KANK4Q5T7N3 995 aaPredicted RBP22.29■■□□□ 1.16
PRAG1-202ENST00000622241 SETD5Q9C0A6 1442 aa22.29■■□□□ 1.16
PRAG1-202ENST00000622241 ERCC6Q03468 1493 aa22.28■■□□□ 1.16
PRAG1-202ENST00000622241 ARHGAP35Q9NRY4 1499 aa22.26■■□□□ 1.15
PRAG1-202ENST00000622241 KCNH8Q96L42 1107 aa22.25■■□□□ 1.15
PRAG1-202ENST00000622241 FMN1Q68DA7 1419 aa22.24■■□□□ 1.15
PRAG1-202ENST00000622241 WDR43Q15061 677 aaKnown RBP eCLIP22.23■■□□□ 1.15
PRAG1-202ENST00000622241 EIF4G1Q04637 1599 aaKnown RBP22.23■■□□□ 1.15
PRAG1-202ENST00000622241 CCDC136Q96JN2 1154 aa22.23■■□□□ 1.15
PRAG1-202ENST00000622241 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.21■■□□□ 1.15
PRAG1-202ENST00000622241 RAPGEF2Q9Y4G8 1499 aa22.2■■□□□ 1.14
PRAG1-202ENST00000622241 SALL2Q9Y467 1007 aaPredicted RBP22.19■■□□□ 1.14
PRAG1-202ENST00000622241 TDRD9Q8NDG6 1382 aaKnown RBP22.14■■□□□ 1.14
PRAG1-202ENST00000622241 CARD11Q9BXL7 1154 aa22.13■■□□□ 1.13
PRAG1-202ENST00000622241 RGL3Q3MIN7 710 aa22.13■■□□□ 1.13
PRAG1-202ENST00000622241 CDCA8Q53HL2 280 aa22.13■■□□□ 1.13
PRAG1-202ENST00000622241 RUSC2Q8N2Y8 1516 aa22.12■■□□□ 1.13
PRAG1-202ENST00000622241 NPM2Q86SE8 214 aaKnown RBP22.11■■□□□ 1.13
PRAG1-202ENST00000622241 RAB3GAP2Q9H2M9 1393 aa22.11■■□□□ 1.13
PRAG1-202ENST00000622241 SLC24A1O60721 1099 aa22.06■■□□□ 1.12
PRAG1-202ENST00000622241 CARMIL2Q6F5E8 1435 aa22.06■■□□□ 1.12
PRAG1-202ENST00000622241 CCER2I3L3R5 266 aa22.03■■□□□ 1.12
PRAG1-202ENST00000622241 IRX6P78412 446 aaPredicted RBP22.02■■□□□ 1.12
PRAG1-202ENST00000622241 UPF2Q9HAU5 1272 aaKnown RBP22.02■■□□□ 1.12
PRAG1-202ENST00000622241 KNSTRNQ9Y448 316 aa21.99■■□□□ 1.11
PRAG1-202ENST00000622241 FHOD3Q2V2M9 1422 aa21.99■■□□□ 1.11
PRAG1-202ENST00000622241 FANCD2Q9BXW9 1451 aa21.96■■□□□ 1.11
PRAG1-202ENST00000622241 BCL11AQ9H165 835 aa21.95■■□□□ 1.11
PRAG1-202ENST00000622241 SUPT16HQ9Y5B9 1047 aaKnown RBP21.94■■□□□ 1.1
PRAG1-202ENST00000622241 NCAPD3P42695 1498 aa21.94■■□□□ 1.1
PRAG1-202ENST00000622241 PPP1R15AO75807 674 aaPredicted RBP21.92■■□□□ 1.1
PRAG1-202ENST00000622241 MPHOSPH9Q99550 1183 aa21.9■■□□□ 1.1
PRAG1-202ENST00000622241 HSPA5P11021 654 aaKnown RBP21.9■■□□□ 1.1
PRAG1-202ENST00000622241 DCAF11Q8TEB1 546 aa21.89■■□□□ 1.1
PRAG1-202ENST00000622241 CFAP53Q96M91 514 aa21.88■■□□□ 1.09
PRAG1-202ENST00000622241 PKD2Q13563 968 aa21.87■■□□□ 1.09
PRAG1-202ENST00000622241 DHX57Q6P158 1386 aaKnown RBP21.87■■□□□ 1.09
PRAG1-202ENST00000622241 ANKRD30AQ9BXX3 1397 aa21.86■■□□□ 1.09
PRAG1-202ENST00000622241 IGF1RP08069 1367 aa21.86■■□□□ 1.09
PRAG1-202ENST00000622241 CCDC18Q5T9S5 1454 aa21.85■■□□□ 1.09
PRAG1-202ENST00000622241 PPP4R2Q9NY27 417 aa21.85■■□□□ 1.09
PRAG1-202ENST00000622241 KANK1Q14678 1352 aa21.84■■□□□ 1.09
PRAG1-202ENST00000622241 TMF1P82094 1093 aa21.84■■□□□ 1.09
PRAG1-202ENST00000622241 FGD5Q6ZNL6 1462 aa21.81■■□□□ 1.08
PRAG1-202ENST00000622241 HSP90AA1P07900 732 aaKnown RBP21.8■■□□□ 1.08
PRAG1-202ENST00000622241 NUP155O75694 1391 aa21.77■■□□□ 1.08
PRAG1-202ENST00000622241 RSPH4AQ5TD94 716 aa21.77■■□□□ 1.08
PRAG1-202ENST00000622241 FOXD1Q16676 465 aa21.76■■□□□ 1.07
PRAG1-202ENST00000622241 PLPPR3Q6T4P5 718 aa21.76■■□□□ 1.07
PRAG1-202ENST00000622241 KIF21BO75037 1637 aa21.76■■□□□ 1.07
PRAG1-202ENST00000622241 EFCAB2Q5VUJ9 269 aa21.75■■□□□ 1.07
PRAG1-202ENST00000622241 JPH4Q96JJ6 628 aa21.72■■□□□ 1.07
PRAG1-202ENST00000622241 L3MBTL2Q969R5 705 aa21.71■■□□□ 1.07
PRAG1-202ENST00000622241 ERICH3Q5RHP9 1530 aa21.7■■□□□ 1.07
PRAG1-202ENST00000622241 DDRGK1Q96HY6 314 aa21.7■■□□□ 1.06
PRAG1-202ENST00000622241 MYH16Q9H6N6 1097 aa21.7■■□□□ 1.06
PRAG1-202ENST00000622241 CC2D1BQ5T0F9 858 aaKnown RBP21.7■■□□□ 1.06
PRAG1-202ENST00000622241 NUDCQ9Y266 331 aa21.69■■□□□ 1.06
PRAG1-202ENST00000622241 GAPVD1Q14C86 1478 aa21.68■■□□□ 1.06
PRAG1-202ENST00000622241 ERICH6BQ5W0A0 696 aa21.67■■□□□ 1.06
PRAG1-202ENST00000622241 CFTRP13569 1480 aa21.67■■□□□ 1.06
PRAG1-202ENST00000622241 SENP3-EIF4A1A0A087X0R7 540 aa21.66■■□□□ 1.06
PRAG1-202ENST00000622241 POGKQ9P215 609 aa21.65■■□□□ 1.06
PRAG1-202ENST00000622241 NBR1Q14596 966 aa21.64■■□□□ 1.06
PRAG1-202ENST00000622241 ANP32BQ92688 251 aaKnown RBP21.64■■□□□ 1.05
PRAG1-202ENST00000622241 KTN1Q86UP2 1357 aaKnown RBP21.64■■□□□ 1.05
PRAG1-202ENST00000622241 SYNJ1O43426 1573 aa21.64■■□□□ 1.05
PRAG1-202ENST00000622241 RALBP1Q15311 655 aa21.63■■□□□ 1.05
PRAG1-202ENST00000622241 ROCK2O75116 1388 aaKnown RBP21.62■■□□□ 1.05
PRAG1-202ENST00000622241 RAD54L2Q9Y4B4 1467 aa21.62■■□□□ 1.05
PRAG1-202ENST00000622241 MAPK8IP3Q9UPT6 1336 aa21.61■■□□□ 1.05
PRAG1-202ENST00000622241 SENP3Q9H4L4 574 aaPredicted RBP21.61■■□□□ 1.05
PRAG1-202ENST00000622241 BECN1Q14457 450 aa21.6■■□□□ 1.05
PRAG1-202ENST00000622241 HNRNPMP52272 730 aaKnown RBP eCLIP21.58■■□□□ 1.051e-6■■■□□ 15.4
PRAG1-202ENST00000622241 HMGXB3Q12766 1538 aa21.58■■□□□ 1.04
PRAG1-202ENST00000622241 ARID4BQ4LE39 1312 aaPredicted RBP21.57■■□□□ 1.04
PRAG1-202ENST00000622241 LRRC9Q6ZRR7 1453 aa21.56■■□□□ 1.04
PRAG1-202ENST00000622241 NEUROD2Q15784 382 aa21.56■■□□□ 1.04
PRAG1-202ENST00000622241 FGD6Q6ZV73 1430 aa21.56■■□□□ 1.04
PRAG1-202ENST00000622241 PRXQ9BXM0 1461 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms