RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 AQRO60306 1485 aaKnown RBP eCLIP4.91□□□□□ -1.62
U1.39-201ENST00000621562 THOC2Q8NI27 1593 aaKnown RBP4.91□□□□□ -1.62
U1.39-201ENST00000621562 SNAPC4Q5SXM2 1469 aa4.9□□□□□ -1.62
U1.39-201ENST00000621562 LRRC9Q6ZRR7 1453 aa4.9□□□□□ -1.62
U1.39-201ENST00000621562 FYCO1Q9BQS8 1478 aa4.9□□□□□ -1.62
U1.39-201ENST00000621562 RAD54L2Q9Y4B4 1467 aa4.9□□□□□ -1.62
U1.39-201ENST00000621562 KANK4Q5T7N3 995 aaPredicted RBP4.89□□□□□ -1.63
U1.39-201ENST00000621562 GCC2Q8IWJ2 1684 aa4.89□□□□□ -1.63
U1.39-201ENST00000621562 CARMIL1Q5VZK9 1371 aa4.89□□□□□ -1.63
U1.39-201ENST00000621562 ADAMTS12P58397 1594 aa4.88□□□□□ -1.63
U1.39-201ENST00000621562 HNRNPUL2Q1KMD3 747 aaKnown RBP4.88□□□□□ -1.63
U1.39-201ENST00000621562 DIEXFQ68CQ4 756 aaKnown RBP4.88□□□□□ -1.63
U1.39-201ENST00000621562 CLSPNQ9HAW4 1339 aa4.88□□□□□ -1.63
U1.39-201ENST00000621562 SUPT6HQ7KZ85 1726 aaKnown RBP4.87□□□□□ -1.63
U1.39-201ENST00000621562 ZNF316A6NFI3 1004 aaPredicted RBP4.87□□□□□ -1.63
U1.39-201ENST00000621562 PHLDB1Q86UU1 1377 aa4.87□□□□□ -1.63
U1.39-201ENST00000621562 CCNB3Q8WWL7 1395 aa4.87□□□□□ -1.63
U1.39-201ENST00000621562 CASKIN1Q8WXD9 1431 aa4.87□□□□□ -1.63
U1.39-201ENST00000621562 ARHGEF11O15085 1522 aa4.87□□□□□ -1.63
U1.39-201ENST00000621562 NEUROD1Q13562 356 aa4.86□□□□□ -1.63
U1.39-201ENST00000621562 ACIN1Q9UKV3 1341 aaKnown RBP4.86□□□□□ -1.63
U1.39-201ENST00000621562 FHAD1B1AJZ9 1412 aa4.86□□□□□ -1.63
U1.39-201ENST00000621562 FHOD3Q2V2M9 1422 aa4.86□□□□□ -1.63
U1.39-201ENST00000621562 GRIN2BQ13224 1484 aa4.86□□□□□ -1.63
U1.39-201ENST00000621562 MAGI3Q5TCQ9 1506 aa4.85□□□□□ -1.63
U1.39-201ENST00000621562 PTPN23Q9H3S7 1636 aa4.85□□□□□ -1.63
U1.39-201ENST00000621562 POLR1AO95602 1720 aaPredicted RBP4.84□□□□□ -1.63
U1.39-201ENST00000621562 HECW1Q76N89 1606 aa4.84□□□□□ -1.63
U1.39-201ENST00000621562 EHBP1L1Q8N3D4 1523 aa4.84□□□□□ -1.63
U1.39-201ENST00000621562 UGGT2Q9NYU1 1516 aa4.84□□□□□ -1.63
U1.39-201ENST00000621562 KDM5BQ9UGL1 1544 aa4.84□□□□□ -1.63
U1.39-201ENST00000621562 WDR62O43379 1518 aa4.83□□□□□ -1.64
U1.39-201ENST00000621562 RAB3GAP2Q9H2M9 1393 aa4.83□□□□□ -1.64
U1.39-201ENST00000621562 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.83□□□□□ -1.64
U1.39-201ENST00000621562 APLP2Q06481 763 aa4.83□□□□□ -1.64
U1.39-201ENST00000621562 IQGAP2Q13576 1575 aa4.82□□□□□ -1.64
U1.39-201ENST00000621562 GAPVD1Q14C86 1478 aa4.82□□□□□ -1.64
U1.39-201ENST00000621562 RANGAP1P46060 587 aaPredicted RBP4.82□□□□□ -1.64
U1.39-201ENST00000621562 CROCC2H7BZ55 1655 aa4.82□□□□□ -1.64
U1.39-201ENST00000621562 FGD6Q6ZV73 1430 aa4.81□□□□□ -1.64
U1.39-201ENST00000621562 SETD5Q9C0A6 1442 aa4.81□□□□□ -1.64
U1.39-201ENST00000621562 ADGBQ8N7X0 1667 aa4.81□□□□□ -1.64
U1.39-201ENST00000621562 KDM6BO15054 1643 aa4.81□□□□□ -1.64
U1.39-201ENST00000621562 EIF4G3O43432 1585 aaKnown RBP4.81□□□□□ -1.64
U1.39-201ENST00000621562 TCOF1Q13428 1488 aaKnown RBP4.81□□□□□ -1.64
U1.39-201ENST00000621562 FMN1Q68DA7 1419 aa4.8□□□□□ -1.64
U1.39-201ENST00000621562 KIAA0556O60303 1618 aa4.8□□□□□ -1.64
U1.39-201ENST00000621562 ADCY10Q96PN6 1610 aa4.8□□□□□ -1.64
U1.39-201ENST00000621562 MIER1Q8N108 512 aa4.8□□□□□ -1.64
U1.39-201ENST00000621562 NCOA2Q15596 1464 aa4.8□□□□□ -1.64
U1.39-201ENST00000621562 PTPRKQ15262 1439 aa4.8□□□□□ -1.64
U1.39-201ENST00000621562 PDS5BQ9NTI5 1447 aa4.8□□□□□ -1.64
U1.39-201ENST00000621562 DENND4BO75064 1496 aaPredicted RBP4.79□□□□□ -1.64
U1.39-201ENST00000621562 CCDC18Q5T9S5 1454 aa4.79□□□□□ -1.64
U1.39-201ENST00000621562 MRC2Q9UBG0 1479 aa4.79□□□□□ -1.64
U1.39-201ENST00000621562 MYOM3Q5VTT5 1437 aa4.79□□□□□ -1.64
U1.39-201ENST00000621562 DNMT1P26358 1616 aaKnown RBP4.79□□□□□ -1.64
U1.39-201ENST00000621562 CENPBP07199 599 aaPredicted RBP4.78□□□□□ -1.64
U1.39-201ENST00000621562 DNAJC5BQ9UF47 199 aa4.78□□□□□ -1.64
U1.39-201ENST00000621562 RAPGEF6Q8TEU7 1601 aa4.78□□□□□ -1.64
U1.39-201ENST00000621562 HFM1A2PYH4 1435 aa4.78□□□□□ -1.64
U1.39-201ENST00000621562 TDRD9Q8NDG6 1382 aaKnown RBP4.78□□□□□ -1.64
U1.39-201ENST00000621562 CDC42BPAQ5VT25 1732 aa4.77□□□□□ -1.65
U1.39-201ENST00000621562 ITSN2Q9NZM3 1697 aa4.77□□□□□ -1.65
U1.39-201ENST00000621562 GTF3C3Q9Y5Q9 886 aa4.77□□□□□ -1.65
U1.39-201ENST00000621562 AKNAQ7Z591 1439 aa4.77□□□□□ -1.65
U1.39-201ENST00000621562 EPRSP07814 1512 aaKnown RBP4.77□□□□□ -1.65
U1.39-201ENST00000621562 CDK13Q14004 1512 aaKnown RBP4.77□□□□□ -1.65
U1.39-201ENST00000621562 DISP1Q96F81 1524 aa4.77□□□□□ -1.65
U1.39-201ENST00000621562 NAIPQ13075 1403 aa4.76□□□□□ -1.65
U1.39-201ENST00000621562 CEP170Q5SW79 1584 aa4.76□□□□□ -1.65
U1.39-201ENST00000621562 UACAQ9BZF9 1416 aa4.75□□□□□ -1.65
U1.39-201ENST00000621562 PELP1Q8IZL8 1130 aaKnown RBP4.75□□□□□ -1.65
U1.39-201ENST00000621562 ZNF608Q9ULD9 1512 aaPredicted RBP4.75□□□□□ -1.65
U1.39-201ENST00000621562 IFT140Q96RY7 1462 aa4.75□□□□□ -1.65
U1.39-201ENST00000621562 KIF14Q15058 1648 aa4.74□□□□□ -1.65
U1.39-201ENST00000621562 NUP153P49790 1475 aaKnown RBP4.74□□□□□ -1.65
U1.39-201ENST00000621562 P3H3Q8IVL6 736 aa4.73□□□□□ -1.65
U1.39-201ENST00000621562 MTUS2Q5JR59 1369 aa4.73□□□□□ -1.65
U1.39-201ENST00000621562 GRIN2AQ12879 1464 aa4.73□□□□□ -1.65
U1.39-201ENST00000621562 KIAA0586Q9BVV6 1533 aa4.72□□□□□ -1.65
U1.39-201ENST00000621562 ABCA8O94911 1581 aa4.72□□□□□ -1.65
U1.39-201ENST00000621562 CHD1O14646 1710 aa4.72□□□□□ -1.65
U1.39-201ENST00000621562 MIA2Q96PC5 1412 aa4.72□□□□□ -1.65
U1.39-201ENST00000621562 TEX14Q8IWB6 1497 aa4.71□□□□□ -1.66
U1.39-201ENST00000621562 MAGI1Q96QZ7 1491 aaPredicted RBP4.71□□□□□ -1.66
U1.39-201ENST00000621562 ITGAEP38570 1179 aa4.71□□□□□ -1.66
U1.39-201ENST00000621562 FAM50AQ14320 339 aaKnown RBP4.71□□□□□ -1.66
U1.39-201ENST00000621562 YTHDC1Q96MU7 727 aaKnown RBP4.71□□□□□ -1.66
U1.39-201ENST00000621562 CDC42BPBQ9Y5S2 1711 aa4.71□□□□□ -1.66
U1.39-201ENST00000621562 SIN3AQ96ST3 1273 aa4.7□□□□□ -1.66
U1.39-201ENST00000621562 TIMELESSQ9UNS1 1208 aa4.7□□□□□ -1.66
U1.39-201ENST00000621562 E9PCH4 1651 aa4.7□□□□□ -1.66
U1.39-201ENST00000621562 ADGRL2O95490 1459 aa4.69□□□□□ -1.66
U1.39-201ENST00000621562 MBD5Q9P267 1494 aa4.69□□□□□ -1.66
U1.39-201ENST00000621562 BCORL1Q5H9F3 1711 aa4.69□□□□□ -1.66
U1.39-201ENST00000621562 MYO5CQ9NQX4 1742 aa4.69□□□□□ -1.66
U1.39-201ENST00000621562 SHROOM2Q13796 1616 aa4.69□□□□□ -1.66
U1.39-201ENST00000621562 PREX2Q70Z35 1606 aa4.69□□□□□ -1.66
U1.39-201ENST00000621562 PPP1R15AO75807 674 aaPredicted RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms