RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 NISCHQ9Y2I1 1504 aa7.06□□□□□ -1.28
U1.39-201ENST00000621562 CCDC180Q9P1Z9 1646 aa6.15□□□□□ -1.42
U1.39-201ENST00000621562 ZCCHC6Q5VYS8 1495 aaKnown RBP6.01□□□□□ -1.45
U1.39-201ENST00000621562 DCAF1Q9Y4B6 1507 aa5.86□□□□□ -1.47
U1.39-201ENST00000621562 SHROOM4Q9ULL8 1493 aa5.81□□□□□ -1.48
U1.39-201ENST00000621562 ABCC9O60706 1549 aa5.72□□□□□ -1.49
U1.39-201ENST00000621562 MYO15BQ96JP2 1530 aa5.69□□□□□ -1.5
U1.39-201ENST00000621562 SUPT5HO00267 1087 aaKnown RBP5.63□□□□□ -1.51
U1.39-201ENST00000621562 SCRIBQ14160 1630 aa5.63□□□□□ -1.51
U1.39-201ENST00000621562 UNC13AQ9UPW8 1703 aa5.6□□□□□ -1.51
U1.39-201ENST00000621562 CHIC1Q5VXU3 224 aa5.58□□□□□ -1.52
U1.39-201ENST00000621562 NACADO15069 1562 aa5.58□□□□□ -1.52
U1.39-201ENST00000621562 RB1CC1Q8TDY2 1594 aa5.56□□□□□ -1.52
U1.39-201ENST00000621562 EIF4G1Q04637 1599 aaKnown RBP5.54□□□□□ -1.52
U1.39-201ENST00000621562 RSF1Q96T23 1441 aaPredicted RBP5.52□□□□□ -1.53
U1.39-201ENST00000621562 DCAF8L2P0C7V8 631 aa5.5□□□□□ -1.53
U1.39-201ENST00000621562 BAZ1AQ9NRL2 1556 aaPredicted RBP5.5□□□□□ -1.53
U1.39-201ENST00000621562 WIZO95785 1651 aa5.49□□□□□ -1.53
U1.39-201ENST00000621562 MROH2BQ7Z745 1585 aa5.47□□□□□ -1.53
U1.39-201ENST00000621562 CECR2Q9BXF3 1484 aa5.46□□□□□ -1.53
U1.39-201ENST00000621562 SMARCA4P51532 1647 aa5.43□□□□□ -1.54
U1.39-201ENST00000621562 TOP2AP11388 1531 aaKnown RBP5.4□□□□□ -1.54
U1.39-201ENST00000621562 BICRAQ9NZM4 1560 aa5.4□□□□□ -1.55
U1.39-201ENST00000621562 SMARCA2P51531 1590 aa5.38□□□□□ -1.55
U1.39-201ENST00000621562 HRCP23327 699 aa5.36□□□□□ -1.55
U1.39-201ENST00000621562 PEG3Q9GZU2 1588 aa5.36□□□□□ -1.55
U1.39-201ENST00000621562 LOC105371045A0A1W2PR82 267 aa5.33□□□□□ -1.56
U1.39-201ENST00000621562 ABCC8Q09428 1581 aa5.31□□□□□ -1.56
U1.39-201ENST00000621562 CCDC88BA6NC98 1476 aa5.31□□□□□ -1.56
U1.39-201ENST00000621562 PCGF6Q9BYE7 350 aa5.28□□□□□ -1.56
U1.39-201ENST00000621562 PRDM2Q13029 1718 aa5.28□□□□□ -1.56
U1.39-201ENST00000621562 TRIM41Q8WV44 630 aa5.26□□□□□ -1.57
U1.39-201ENST00000621562 SYNJ1O43426 1573 aa5.25□□□□□ -1.57
U1.39-201ENST00000621562 KIF21BO75037 1637 aa5.23□□□□□ -1.57
U1.39-201ENST00000621562 BIVM-ERCC5R4GMW8 1640 aa5.23□□□□□ -1.57
U1.39-201ENST00000621562 TRIM26Q12899 539 aaPredicted RBP5.23□□□□□ -1.57
U1.39-201ENST00000621562 PPARGC1BQ86YN6 1023 aaKnown RBP5.22□□□□□ -1.57
U1.39-201ENST00000621562 WRNQ14191 1432 aaPredicted RBP eCLIP5.22□□□□□ -1.57
U1.39-201ENST00000621562 ATAD2BQ9ULI0 1458 aa5.21□□□□□ -1.58
U1.39-201ENST00000621562 RUSC2Q8N2Y8 1516 aa5.2□□□□□ -1.58
U1.39-201ENST00000621562 TOP2BQ02880 1626 aa5.19□□□□□ -1.58
U1.39-201ENST00000621562 HMGXB3Q12766 1538 aa5.19□□□□□ -1.58
U1.39-201ENST00000621562 SOGA1O94964 1423 aa5.19□□□□□ -1.58
U1.39-201ENST00000621562 EEA1Q15075 1411 aa5.19□□□□□ -1.58
U1.39-201ENST00000621562 CEP162Q5TB80 1403 aa5.18□□□□□ -1.58
U1.39-201ENST00000621562 FAM9AQ8IZU1 332 aaPredicted RBP5.18□□□□□ -1.58
U1.39-201ENST00000621562 BAZ1BQ9UIG0 1483 aaKnown RBP5.18□□□□□ -1.58
U1.39-201ENST00000621562 GOLGA3Q08378 1498 aa5.16□□□□□ -1.58
U1.39-201ENST00000621562 TNIKQ9UKE5 1360 aa5.16□□□□□ -1.58
U1.39-201ENST00000621562 CEP164Q9UPV0 1460 aa5.13□□□□□ -1.59
U1.39-201ENST00000621562 ERICH3Q5RHP9 1530 aa5.13□□□□□ -1.59
U1.39-201ENST00000621562 PABPN1Q86U42 306 aaKnown RBP eCLIP5.12□□□□□ -1.59
U1.39-201ENST00000621562 CUX1P39880 1505 aa5.12□□□□□ -1.59
U1.39-201ENST00000621562 NCAPD3P42695 1498 aa5.11□□□□□ -1.59
U1.39-201ENST00000621562 RAPGEF2Q9Y4G8 1499 aa5.09□□□□□ -1.59
U1.39-201ENST00000621562 ZEB1P37275 1124 aaPredicted RBP5.09□□□□□ -1.59
U1.39-201ENST00000621562 EHMT2Q96KQ7 1210 aa5.08□□□□□ -1.6
U1.39-201ENST00000621562 PRXQ9BXM0 1461 aa5.07□□□□□ -1.6
U1.39-201ENST00000621562 CSRNP3Q8WYN3 585 aa5.07□□□□□ -1.6
U1.39-201ENST00000621562 WDR97A6NE52 1622 aa5.07□□□□□ -1.6
U1.39-201ENST00000621562 CFTRP13569 1480 aa5.07□□□□□ -1.6
U1.39-201ENST00000621562 ARAP1Q96P48 1450 aa5.07□□□□□ -1.6
U1.39-201ENST00000621562 VPS8Q8N3P4 1428 aa5.06□□□□□ -1.6
U1.39-201ENST00000621562 CLIP1P30622 1438 aa5.06□□□□□ -1.6
U1.39-201ENST00000621562 CFAP43Q8NDM7 1665 aa5.05□□□□□ -1.6
U1.39-201ENST00000621562 CTTNBP2Q8WZ74 1663 aa5.04□□□□□ -1.6
U1.39-201ENST00000621562 CC2D2AQ9P2K1 1620 aa5.04□□□□□ -1.6
U1.39-201ENST00000621562 LRRIQ1Q96JM4 1722 aa5.01□□□□□ -1.61
U1.39-201ENST00000621562 DNMBPQ6XZF7 1577 aa5□□□□□ -1.61
U1.39-201ENST00000621562 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5□□□□□ -1.61
U1.39-201ENST00000621562 ARHGAP35Q9NRY4 1499 aa5□□□□□ -1.61
U1.39-201ENST00000621562 CUL7Q14999 1698 aa4.99□□□□□ -1.61
U1.39-201ENST00000621562 CUX2O14529 1486 aa4.99□□□□□ -1.61
U1.39-201ENST00000621562 FGD5Q6ZNL6 1462 aa4.99□□□□□ -1.61
U1.39-201ENST00000621562 TIAM1Q13009 1591 aa4.99□□□□□ -1.61
U1.39-201ENST00000621562 KIF27Q86VH2 1401 aa4.98□□□□□ -1.61
U1.39-201ENST00000621562 UBTFP17480 764 aaKnown RBP4.98□□□□□ -1.61
U1.39-201ENST00000621562 PCF11O94913 1555 aaKnown RBP4.98□□□□□ -1.61
U1.39-201ENST00000621562 KIF21AQ7Z4S6 1674 aa4.98□□□□□ -1.61
U1.39-201ENST00000621562 RRBP1Q9P2E9 1410 aaKnown RBP4.97□□□□□ -1.61
U1.39-201ENST00000621562 MAP3K1Q13233 1512 aa4.97□□□□□ -1.61
U1.39-201ENST00000621562 ABCA5Q8WWZ7 1642 aa4.97□□□□□ -1.61
U1.39-201ENST00000621562 CADPSQ9ULU8 1353 aa4.95□□□□□ -1.62
U1.39-201ENST00000621562 CCER1Q8TC90 406 aaPredicted RBP4.95□□□□□ -1.62
U1.39-201ENST00000621562 ABCA10Q8WWZ4 1543 aa4.95□□□□□ -1.62
U1.39-201ENST00000621562 TOPBP1Q92547 1522 aa4.95□□□□□ -1.62
U1.39-201ENST00000621562 PBRM1Q86U86 1689 aa4.95□□□□□ -1.62
U1.39-201ENST00000621562 SAMD9Q5K651 1589 aa4.95□□□□□ -1.62
U1.39-201ENST00000621562 LAMC3Q9Y6N6 1575 aa4.95□□□□□ -1.62
U1.39-201ENST00000621562 EFCAB5A4FU69 1503 aa4.94□□□□□ -1.62
U1.39-201ENST00000621562 TTBK1Q5TCY1 1321 aaPredicted RBP4.94□□□□□ -1.62
U1.39-201ENST00000621562 POLA1P09884 1462 aaPredicted RBP4.94□□□□□ -1.62
U1.39-201ENST00000621562 FANCD2Q9BXW9 1451 aa4.94□□□□□ -1.62
U1.39-201ENST00000621562 IGF1RP08069 1367 aa4.93□□□□□ -1.62
U1.39-201ENST00000621562 TARBP1Q13395 1621 aaKnown RBP4.93□□□□□ -1.62
U1.39-201ENST00000621562 SCAF1Q9H7N4 1312 aaKnown RBP4.93□□□□□ -1.62
U1.39-201ENST00000621562 MAPKBP1O60336 1514 aa4.92□□□□□ -1.62
U1.39-201ENST00000621562 URB2Q14146 1524 aaKnown RBP4.92□□□□□ -1.62
U1.39-201ENST00000621562 DHX57Q6P158 1386 aaKnown RBP4.92□□□□□ -1.62
U1.39-201ENST00000621562 NESP48681 1621 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms