RNA–Protein interactions for RNA: ENST00000620660.4

RYK-208, Transcript of receptor-like tyrosine kinase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RYK, Length 2,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RYK-208ENST00000620660 BCL11AQ9H165 835 aa31.03■■■□□ 2.56
RYK-208ENST00000620660 CUX2O14529 1486 aa31.03■■■□□ 2.56
RYK-208ENST00000620660 RBM19Q9Y4C8 960 aaKnown RBP31.03■■■□□ 2.56
RYK-208ENST00000620660 BIVM-ERCC5R4GMW8 1640 aa30.98■■■□□ 2.55
RYK-208ENST00000620660 SETD5Q9C0A6 1442 aa30.97■■■□□ 2.55
RYK-208ENST00000620660 ANP32CO43423 234 aa30.95■■■□□ 2.55
RYK-208ENST00000620660 CUX1P39880 1505 aa30.95■■■□□ 2.55
RYK-208ENST00000620660 PPP1R15AO75807 674 aaPredicted RBP30.92■■■□□ 2.54
RYK-208ENST00000620660 IRX6P78412 446 aaPredicted RBP30.9■■■□□ 2.54
RYK-208ENST00000620660 PHLDB1Q86UU1 1377 aa30.89■■■□□ 2.54
RYK-208ENST00000620660 TIAM1Q13009 1591 aa30.76■■■□□ 2.52
RYK-208ENST00000620660 LRRC9Q6ZRR7 1453 aa30.73■■■□□ 2.51
RYK-208ENST00000620660 HNRNPUQ00839 825 aaKnown RBP eCLIP30.71■■■□□ 2.51
RYK-208ENST00000620660 CCER2I3L3R5 266 aa30.7■■■□□ 2.51
RYK-208ENST00000620660 MSH5O43196 834 aa30.68■■■□□ 2.5
RYK-208ENST00000620660 TONSLQ96HA7 1378 aa30.68■■■□□ 2.5
RYK-208ENST00000620660 IGF1RP08069 1367 aa30.67■■■□□ 2.5
RYK-208ENST00000620660 CARMIL1Q5VZK9 1371 aa30.63■■■□□ 2.49
RYK-208ENST00000620660 ERICH6Q7L0X2 663 aa30.6■■■□□ 2.49
RYK-208ENST00000620660 FHOD3Q2V2M9 1422 aa30.54■■■□□ 2.48
RYK-208ENST00000620660 TIMELESSQ9UNS1 1208 aa30.53■■■□□ 2.48
RYK-208ENST00000620660 CDK11AQ9UQ88 783 aaPredicted RBP30.53■■■□□ 2.48
RYK-208ENST00000620660 PCF11O94913 1555 aaKnown RBP30.49■■■□□ 2.47
RYK-208ENST00000620660 CFTRP13569 1480 aa30.48■■■□□ 2.47
RYK-208ENST00000620660 FHAD1B1AJZ9 1412 aa30.48■■■□□ 2.47
RYK-208ENST00000620660 MAP3K1Q13233 1512 aa30.44■■■□□ 2.46
RYK-208ENST00000620660 NCAPD3P42695 1498 aa30.41■■■□□ 2.46
RYK-208ENST00000620660 CCDC18Q5T9S5 1454 aa30.37■■■□□ 2.45
RYK-208ENST00000620660 FGD5Q6ZNL6 1462 aa30.37■■■□□ 2.45
RYK-208ENST00000620660 CNGB1Q14028 1251 aaPredicted RBP30.37■■■□□ 2.45
RYK-208ENST00000620660 CCDC184Q52MB2 194 aa30.35■■■□□ 2.45
RYK-208ENST00000620660 FAM9BQ8IZU0 186 aa30.35■■■□□ 2.45
RYK-208ENST00000620660 HMGXB3Q12766 1538 aa30.34■■■□□ 2.45
RYK-208ENST00000620660 CHIC2Q9UKJ5 165 aa30.33■■■□□ 2.45
RYK-208ENST00000620660 HSPA5P11021 654 aaKnown RBP30.31■■■□□ 2.44
RYK-208ENST00000620660 B4GALNT3Q6L9W6 998 aa30.31■■■□□ 2.44
RYK-208ENST00000620660 MTUS2Q5JR59 1369 aa30.3■■■□□ 2.44
RYK-208ENST00000620660 RRP7BPQ9NSQ0 103 aa30.29■■■□□ 2.44
RYK-208ENST00000620660 CFAP43Q8NDM7 1665 aa30.29■■■□□ 2.44
RYK-208ENST00000620660 WASHC2AQ641Q2 1341 aa30.28■■■□□ 2.44
RYK-208ENST00000620660 PTPRKQ15262 1439 aa30.28■■■□□ 2.44
RYK-208ENST00000620660 FGD6Q6ZV73 1430 aa30.28■■■□□ 2.44
RYK-208ENST00000620660 FANCIQ9NVI1 1328 aa30.27■■■□□ 2.44
RYK-208ENST00000620660 SENP3-EIF4A1A0A087X0R7 540 aa30.21■■■□□ 2.43
RYK-208ENST00000620660 UACAQ9BZF9 1416 aa30.21■■■□□ 2.43
RYK-208ENST00000620660 AQRO60306 1485 aaKnown RBP eCLIP30.21■■■□□ 2.43
RYK-208ENST00000620660 PPP4R2Q9NY27 417 aa30.18■■■□□ 2.42
RYK-208ENST00000620660 FYCO1Q9BQS8 1478 aa30.17■■■□□ 2.42
RYK-208ENST00000620660 FOXD1Q16676 465 aa30.17■■■□□ 2.42
RYK-208ENST00000620660 MRS2Q9HD23 443 aa30.17■■■□□ 2.42
RYK-208ENST00000620660 RAD54L2Q9Y4B4 1467 aa30.15■■■□□ 2.42
RYK-208ENST00000620660 CASKIN1Q8WXD9 1431 aa30.15■■■□□ 2.42
RYK-208ENST00000620660 HFM1A2PYH4 1435 aa30.14■■■□□ 2.41
RYK-208ENST00000620660 EIF4G2P78344 907 aaKnown RBP eCLIP30.13■■■□□ 2.41
RYK-208ENST00000620660 CADPSQ9ULU8 1353 aa30.13■■■□□ 2.41
RYK-208ENST00000620660 ARID3CA6NKF2 412 aa30.11■■■□□ 2.41
RYK-208ENST00000620660 NAIPQ13075 1403 aa30.11■■■□□ 2.41
RYK-208ENST00000620660 NBR1Q14596 966 aa30.11■■■□□ 2.41
RYK-208ENST00000620660 PTPN23Q9H3S7 1636 aa30.1■■■□□ 2.41
RYK-208ENST00000620660 C11orf95C9JLR9 678 aaPredicted RBP30.09■■■□□ 2.41
RYK-208ENST00000620660 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.08■■■□□ 2.41
RYK-208ENST00000620660 POLR3GLQ9BT43 218 aa30.06■■■□□ 2.4
RYK-208ENST00000620660 PRKRIP1Q9H875 184 aaPredicted RBP30.02■■■□□ 2.4
RYK-208ENST00000620660 FMN1Q68DA7 1419 aa30.02■■■□□ 2.4
RYK-208ENST00000620660 L3MBTL2Q969R5 705 aa30.01■■■□□ 2.39
RYK-208ENST00000620660 DEKP35659 375 aaKnown RBP30.01■■■□□ 2.39
RYK-208ENST00000620660 NCOA2Q15596 1464 aa30■■■□□ 2.39
RYK-208ENST00000620660 KDM5BQ9UGL1 1544 aa30■■■□□ 2.39
RYK-208ENST00000620660 CNTLNQ9NXG0 1405 aa29.97■■■□□ 2.39
RYK-208ENST00000620660 MYOM3Q5VTT5 1437 aa29.96■■■□□ 2.39
RYK-208ENST00000620660 EFCAB5A4FU69 1503 aa29.94■■■□□ 2.38
RYK-208ENST00000620660 PAK3O75914 559 aaPredicted RBP29.92■■■□□ 2.38
RYK-208ENST00000620660 FANCD2Q9BXW9 1451 aa29.91■■■□□ 2.38
RYK-208ENST00000620660 SNAPC4Q5SXM2 1469 aa29.91■■■□□ 2.38
RYK-208ENST00000620660 PRDM2Q13029 1718 aa29.9■■■□□ 2.38
RYK-208ENST00000620660 ERICH6BQ5W0A0 696 aa29.9■■■□□ 2.38
RYK-208ENST00000620660 MPHOSPH9Q99550 1183 aa29.9■■■□□ 2.38
RYK-208ENST00000620660 CCDC7Q96M83 1385 aa29.89■■■□□ 2.37
RYK-208ENST00000620660 ZBED9Q6R2W3 1325 aa29.89■■■□□ 2.37
RYK-208ENST00000620660 NOP58Q9Y2X3 529 aaKnown RBP29.89■■■□□ 2.37
RYK-208ENST00000620660 NBPF8Q3BBV2 869 aa29.85■■■□□ 2.37
RYK-208ENST00000620660 ZNF326Q5BKZ1 582 aaKnown RBP29.85■■■□□ 2.37
RYK-208ENST00000620660 AKNAQ7Z591 1439 aa29.84■■■□□ 2.37
RYK-208ENST00000620660 POLA1P09884 1462 aaPredicted RBP29.84■■■□□ 2.37
RYK-208ENST00000620660 TDRD9Q8NDG6 1382 aaKnown RBP29.83■■■□□ 2.37
RYK-208ENST00000620660 CC2D2AQ9P2K1 1620 aa29.82■■■□□ 2.36
RYK-208ENST00000620660 CCDC136Q96JN2 1154 aa29.81■■■□□ 2.36
RYK-208ENST00000620660 DENND4BO75064 1496 aaPredicted RBP29.8■■■□□ 2.36
RYK-208ENST00000620660 KIF7Q2M1P5 1343 aa29.8■■■□□ 2.36
RYK-208ENST00000620660 KDM6BO15054 1643 aa29.78■■■□□ 2.36
RYK-208ENST00000620660 CTTNBP2Q8WZ74 1663 aa29.77■■■□□ 2.36
RYK-208ENST00000620660 ABCA10Q8WWZ4 1543 aa29.76■■■□□ 2.36
RYK-208ENST00000620660 NCOA1Q15788 1441 aa29.75■■■□□ 2.35
RYK-208ENST00000620660 LRRIQ1Q96JM4 1722 aa29.75■■■□□ 2.35
RYK-208ENST00000620660 SUPT6HQ7KZ85 1726 aaKnown RBP29.73■■■□□ 2.35
RYK-208ENST00000620660 TOPBP1Q92547 1522 aa29.73■■■□□ 2.35
RYK-208ENST00000620660 NESP48681 1621 aa29.71■■■□□ 2.35
RYK-208ENST00000620660 ANP32AP39687 249 aaKnown RBP29.69■■■□□ 2.34
RYK-208ENST00000620660 MAGI3Q5TCQ9 1506 aa29.69■■■□□ 2.34
RYK-208ENST00000620660 SLC4A1APQ9BWU0 796 aaKnown RBP29.69■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms