RNA–Protein interactions for RNA: ENST00000620175.4

SYN2-205, Transcript of synapsin II, humanhuman

TSL 1 (best) BASIC

Gene SYN2, Length 3,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN2-205ENST00000620175 KANK4Q5T7N3 995 aaPredicted RBP19.29■□□□□ 0.68
SYN2-205ENST00000620175 MYT1LQ9UL68 1186 aa19.28■□□□□ 0.68
SYN2-205ENST00000620175 TONSLQ96HA7 1378 aa19.27■□□□□ 0.68
SYN2-205ENST00000620175 ARID3CA6NKF2 412 aa19.24■□□□□ 0.67
SYN2-205ENST00000620175 CCDC88BA6NC98 1476 aa19.24■□□□□ 0.67
SYN2-205ENST00000620175 WIZO95785 1651 aa19.22■□□□□ 0.67
SYN2-205ENST00000620175 PPP4R2Q9NY27 417 aa19.21■□□□□ 0.67
SYN2-205ENST00000620175 NEFMP07197 916 aa19.21■□□□□ 0.67
SYN2-205ENST00000620175 ABCC8Q09428 1581 aa19.19■□□□□ 0.66
SYN2-205ENST00000620175 CHIC2Q9UKJ5 165 aa19.17■□□□□ 0.66
SYN2-205ENST00000620175 RUSC2Q8N2Y8 1516 aa19.13■□□□□ 0.65
SYN2-205ENST00000620175 GOLGA3Q08378 1498 aa19.12■□□□□ 0.65
SYN2-205ENST00000620175 DHX57Q6P158 1386 aaKnown RBP19.12■□□□□ 0.65
SYN2-205ENST00000620175 IL27Q8NEV9 243 aa19.1■□□□□ 0.65
SYN2-205ENST00000620175 PAK3O75914 559 aaPredicted RBP19.08■□□□□ 0.65
SYN2-205ENST00000620175 DNAJC5BQ9UF47 199 aa19.08■□□□□ 0.65
SYN2-205ENST00000620175 ATAD2BQ9ULI0 1458 aa19.05■□□□□ 0.64
SYN2-205ENST00000620175 TMC1Q8TDI8 760 aa19.01■□□□□ 0.63
SYN2-205ENST00000620175 FANCIQ9NVI1 1328 aa19.01■□□□□ 0.63
SYN2-205ENST00000620175 CCER2I3L3R5 266 aa19■□□□□ 0.63
SYN2-205ENST00000620175 SMARCA4P51532 1647 aa18.99■□□□□ 0.63
SYN2-205ENST00000620175 WRNQ14191 1432 aaPredicted RBP eCLIP18.99■□□□□ 0.63
SYN2-205ENST00000620175 RRP7BPQ9NSQ0 103 aa18.99■□□□□ 0.63
SYN2-205ENST00000620175 EIF4G2P78344 907 aaKnown RBP eCLIP18.96■□□□□ 0.63
SYN2-205ENST00000620175 RAB3GAP2Q9H2M9 1393 aa18.95■□□□□ 0.62
SYN2-205ENST00000620175 CCNB3Q8WWL7 1395 aa18.94■□□□□ 0.62
SYN2-205ENST00000620175 VPS8Q8N3P4 1428 aa18.93■□□□□ 0.62
SYN2-205ENST00000620175 BICRAQ9NZM4 1560 aa18.92■□□□□ 0.62
SYN2-205ENST00000620175 SLC4A3P48751 1232 aa18.92■□□□□ 0.62
SYN2-205ENST00000620175 IPO9Q96P70 1041 aaKnown RBP18.92■□□□□ 0.62
SYN2-205ENST00000620175 ARID4BQ4LE39 1312 aaPredicted RBP18.91■□□□□ 0.62
SYN2-205ENST00000620175 SMARCA2P51531 1590 aa18.91■□□□□ 0.62
SYN2-205ENST00000620175 TIMELESSQ9UNS1 1208 aa18.9■□□□□ 0.62
SYN2-205ENST00000620175 PPP1R15AO75807 674 aaPredicted RBP18.89■□□□□ 0.62
SYN2-205ENST00000620175 EIF4G1Q04637 1599 aaKnown RBP18.86■□□□□ 0.61
SYN2-205ENST00000620175 HSPA5P11021 654 aaKnown RBP18.85■□□□□ 0.61
SYN2-205ENST00000620175 CEP164Q9UPV0 1460 aa18.85■□□□□ 0.61
SYN2-205ENST00000620175 FOXD1Q16676 465 aa18.85■□□□□ 0.61
SYN2-205ENST00000620175 EEA1Q15075 1411 aa18.85■□□□□ 0.61
SYN2-205ENST00000620175 TOP2AP11388 1531 aaKnown RBP18.83■□□□□ 0.6
SYN2-205ENST00000620175 RGS3P49796 1198 aa18.82■□□□□ 0.6
SYN2-205ENST00000620175 KDM2AQ9Y2K7 1162 aa18.81■□□□□ 0.6
SYN2-205ENST00000620175 ERCC6Q03468 1493 aa18.81■□□□□ 0.6
SYN2-205ENST00000620175 SLC4A1APQ9BWU0 796 aaKnown RBP18.81■□□□□ 0.6
SYN2-205ENST00000620175 CCDC184Q52MB2 194 aa18.79■□□□□ 0.6
SYN2-205ENST00000620175 BRPF3Q9ULD4 1205 aa18.79■□□□□ 0.6
SYN2-205ENST00000620175 PPM1GO15355 546 aaPredicted RBP18.78■□□□□ 0.6
SYN2-205ENST00000620175 CADPSQ9ULU8 1353 aa18.75■□□□□ 0.59
SYN2-205ENST00000620175 GLIPR1L2Q4G1C9 344 aa18.75■□□□□ 0.59
SYN2-205ENST00000620175 NAP1L5Q96NT1 182 aaPredicted RBP18.75■□□□□ 0.59
SYN2-205ENST00000620175 CANXP27824 592 aaKnown RBP18.74■□□□□ 0.59
SYN2-205ENST00000620175 ZNF777Q9ULD5 760 aaPredicted RBP18.73■□□□□ 0.59
SYN2-205ENST00000620175 CHMP7Q8WUX9 453 aaPredicted RBP18.73■□□□□ 0.59
SYN2-205ENST00000620175 SETD5Q9C0A6 1442 aa18.72■□□□□ 0.59
SYN2-205ENST00000620175 RAPGEF2Q9Y4G8 1499 aa18.72■□□□□ 0.59
SYN2-205ENST00000620175 UNC13AQ9UPW8 1703 aa18.7■□□□□ 0.58
SYN2-205ENST00000620175 ERICH6BQ5W0A0 696 aa18.69■□□□□ 0.58
SYN2-205ENST00000620175 SPRYD3Q8NCJ5 442 aa18.69■□□□□ 0.58
SYN2-205ENST00000620175 TDRD9Q8NDG6 1382 aaKnown RBP18.68■□□□□ 0.58
SYN2-205ENST00000620175 PLIN1O60240 522 aa18.65■□□□□ 0.58
SYN2-205ENST00000620175 NCAPD3P42695 1498 aa18.65■□□□□ 0.58
SYN2-205ENST00000620175 EXOC6Q8TAG9 804 aa18.64■□□□□ 0.57
SYN2-205ENST00000620175 CC2D2AQ9P2K1 1620 aa18.64■□□□□ 0.57
SYN2-205ENST00000620175 DDRGK1Q96HY6 314 aa18.63■□□□□ 0.57
SYN2-205ENST00000620175 PDE4AP27815 886 aa18.63■□□□□ 0.57
SYN2-205ENST00000620175 SKAP1Q86WV1 359 aa18.63■□□□□ 0.57
SYN2-205ENST00000620175 SLKQ9H2G2 1235 aaPredicted RBP18.63■□□□□ 0.57
SYN2-205ENST00000620175 MTUS2Q5JR59 1369 aa18.63■□□□□ 0.57
SYN2-205ENST00000620175 GZF1Q9H116 711 aaPredicted RBP18.63■□□□□ 0.57
SYN2-205ENST00000620175 NESP48681 1621 aa18.62■□□□□ 0.57
SYN2-205ENST00000620175 PRKRIP1Q9H875 184 aaPredicted RBP18.61■□□□□ 0.57
SYN2-205ENST00000620175 CUX2O14529 1486 aa18.61■□□□□ 0.57
SYN2-205ENST00000620175 GSE1Q14687 1217 aa18.59■□□□□ 0.57
SYN2-205ENST00000620175 VSIG10Q8N0Z9 540 aa18.59■□□□□ 0.57
SYN2-205ENST00000620175 NUDCQ9Y266 331 aa18.58■□□□□ 0.56
SYN2-205ENST00000620175 PDS5BQ9NTI5 1447 aa18.58■□□□□ 0.56
SYN2-205ENST00000620175 KIF27Q86VH2 1401 aa18.58■□□□□ 0.56
SYN2-205ENST00000620175 ARID3AQ99856 593 aa18.57■□□□□ 0.56
SYN2-205ENST00000620175 L3MBTL2Q969R5 705 aa18.56■□□□□ 0.56
SYN2-205ENST00000620175 RCAN3Q9UKA8 241 aa18.53■□□□□ 0.56
SYN2-205ENST00000620175 CC2D1BQ5T0F9 858 aaKnown RBP18.53■□□□□ 0.56
SYN2-205ENST00000620175 AKNAQ7Z591 1439 aa18.52■□□□□ 0.56
SYN2-205ENST00000620175 WASHC2AQ641Q2 1341 aa18.52■□□□□ 0.56
SYN2-205ENST00000620175 FANCD2Q9BXW9 1451 aa18.52■□□□□ 0.56
SYN2-205ENST00000620175 FRAT1Q92837 279 aaPredicted RBP18.51■□□□□ 0.55
SYN2-205ENST00000620175 TCERG1O14776 1098 aaKnown RBP18.5■□□□□ 0.55
SYN2-205ENST00000620175 HSP90AA1P07900 732 aaKnown RBP18.5■□□□□ 0.55
SYN2-205ENST00000620175 RGL3Q3MIN7 710 aa18.5■□□□□ 0.55
SYN2-205ENST00000620175 NFKBIBQ15653 356 aa18.49■□□□□ 0.55
SYN2-205ENST00000620175 UPF2Q9HAU5 1272 aaKnown RBP18.49■□□□□ 0.55
SYN2-205ENST00000620175 WDR97A6NE52 1622 aa18.48■□□□□ 0.55
SYN2-205ENST00000620175 ZBED9Q6R2W3 1325 aa18.48■□□□□ 0.55
SYN2-205ENST00000620175 CARMIL1Q5VZK9 1371 aa18.46■□□□□ 0.55
SYN2-205ENST00000620175 CARD11Q9BXL7 1154 aa18.46■□□□□ 0.54
SYN2-205ENST00000620175 NEUROD2Q15784 382 aa18.44■□□□□ 0.54
SYN2-205ENST00000620175 ZBTB7CA1YPR0 619 aa18.43■□□□□ 0.54
SYN2-205ENST00000620175 TRIM44Q96DX7 344 aaPredicted RBP18.43■□□□□ 0.54
SYN2-205ENST00000620175 FRAT2O75474 233 aaPredicted RBP18.42■□□□□ 0.54
SYN2-205ENST00000620175 WDR43Q15061 677 aaKnown RBP eCLIP18.42■□□□□ 0.54
SYN2-205ENST00000620175 USP35Q9P2H5 1018 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms