RNA–Protein interactions for RNA: ENST00000620175.4

SYN2-205, Transcript of synapsin II, humanhuman

TSL 1 (best) BASIC

Gene SYN2, Length 3,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN2-205ENST00000620175 NISCHQ9Y2I1 1504 aa24.95■■□□□ 1.58
SYN2-205ENST00000620175 SUPT5HO00267 1087 aaKnown RBP23.84■■□□□ 1.41
SYN2-205ENST00000620175 DCAF8L2P0C7V8 631 aa23.61■■□□□ 1.37
SYN2-205ENST00000620175 SHROOM4Q9ULL8 1493 aa23.54■■□□□ 1.36
SYN2-205ENST00000620175 PCGF6Q9BYE7 350 aa23.5■■□□□ 1.35
SYN2-205ENST00000620175 PPARGC1BQ86YN6 1023 aaKnown RBP23.2■■□□□ 1.3
SYN2-205ENST00000620175 HRCP23327 699 aa23.03■■□□□ 1.28
SYN2-205ENST00000620175 EHMT2Q96KQ7 1210 aa22.98■■□□□ 1.27
SYN2-205ENST00000620175 PELP1Q8IZL8 1130 aaKnown RBP22.57■■□□□ 1.2
SYN2-205ENST00000620175 LOC105371045A0A1W2PR82 267 aa22.4■■□□□ 1.18
SYN2-205ENST00000620175 FAM9AQ8IZU1 332 aaPredicted RBP22.4■■□□□ 1.18
SYN2-205ENST00000620175 TTBK1Q5TCY1 1321 aaPredicted RBP22.29■■□□□ 1.16
SYN2-205ENST00000620175 CHIC1Q5VXU3 224 aa22.22■■□□□ 1.15
SYN2-205ENST00000620175 YTHDC1Q96MU7 727 aaKnown RBP22.1■■□□□ 1.13
SYN2-205ENST00000620175 TRIM26Q12899 539 aaPredicted RBP22.04■■□□□ 1.12
SYN2-205ENST00000620175 CCER1Q8TC90 406 aaPredicted RBP21.94■■□□□ 1.1
SYN2-205ENST00000620175 ZEB1P37275 1124 aaPredicted RBP21.94■■□□□ 1.1
SYN2-205ENST00000620175 CENPBP07199 599 aaPredicted RBP21.94■■□□□ 1.1
SYN2-205ENST00000620175 SCAF1Q9H7N4 1312 aaKnown RBP21.91■■□□□ 1.1
SYN2-205ENST00000620175 GTF3C3Q9Y5Q9 886 aa21.8■■□□□ 1.08
SYN2-205ENST00000620175 MYT1Q01538 1121 aa21.72■■□□□ 1.07
SYN2-205ENST00000620175 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.71■■□□□ 1.07
SYN2-205ENST00000620175 TRIM41Q8WV44 630 aa21.65■■□□□ 1.06
SYN2-205ENST00000620175 ABCC9O60706 1549 aa21.62■■□□□ 1.05
SYN2-205ENST00000620175 MYO15BQ96JP2 1530 aa21.57■■□□□ 1.04
SYN2-205ENST00000620175 NEUROD1Q13562 356 aa21.54■■□□□ 1.04
SYN2-205ENST00000620175 ACIN1Q9UKV3 1341 aaKnown RBP21.51■■□□□ 1.03
SYN2-205ENST00000620175 DIEXFQ68CQ4 756 aaKnown RBP21.51■■□□□ 1.03
SYN2-205ENST00000620175 RANGAP1P46060 587 aaPredicted RBP21.3■■□□□ 1
SYN2-205ENST00000620175 PABPN1Q86U42 306 aaKnown RBP eCLIP21.08■□□□□ 0.97
SYN2-205ENST00000620175 HNRNPUL2Q1KMD3 747 aaKnown RBP21.07■□□□□ 0.96
SYN2-205ENST00000620175 BCANQ96GW7 911 aa21.03■□□□□ 0.96
SYN2-205ENST00000620175 UBTFP17480 764 aaKnown RBP20.99■□□□□ 0.95
SYN2-205ENST00000620175 APLP2Q06481 763 aa20.96■□□□□ 0.95
SYN2-205ENST00000620175 DCAF1Q9Y4B6 1507 aa20.95■□□□□ 0.94
SYN2-205ENST00000620175 ERICH6Q7L0X2 663 aa20.93■□□□□ 0.94
SYN2-205ENST00000620175 CCDC180Q9P1Z9 1646 aa20.82■□□□□ 0.92
SYN2-205ENST00000620175 ZNF316A6NFI3 1004 aaPredicted RBP20.82■□□□□ 0.92
SYN2-205ENST00000620175 MIER1Q8N108 512 aa20.77■□□□□ 0.91
SYN2-205ENST00000620175 NEFLP07196 543 aa20.71■□□□□ 0.91
SYN2-205ENST00000620175 ZCCHC6Q5VYS8 1495 aaKnown RBP20.71■□□□□ 0.91
SYN2-205ENST00000620175 ITGAEP38570 1179 aa20.67■□□□□ 0.9
SYN2-205ENST00000620175 SCRIBQ14160 1630 aa20.49■□□□□ 0.87
SYN2-205ENST00000620175 BCL11AQ9H165 835 aa20.48■□□□□ 0.87
SYN2-205ENST00000620175 CNGB1Q14028 1251 aaPredicted RBP20.41■□□□□ 0.86
SYN2-205ENST00000620175 FKBP8Q14318 412 aa20.4■□□□□ 0.86
SYN2-205ENST00000620175 ATP1B4Q9UN42 357 aaPredicted RBP20.36■□□□□ 0.85
SYN2-205ENST00000620175 ANP32EQ9BTT0 268 aa20.36■□□□□ 0.85
SYN2-205ENST00000620175 CSRNP3Q8WYN3 585 aa20.27■□□□□ 0.83
SYN2-205ENST00000620175 SUPT16HQ9Y5B9 1047 aaKnown RBP20.27■□□□□ 0.83
SYN2-205ENST00000620175 TRIM52Q96A61 297 aa20.21■□□□□ 0.83
SYN2-205ENST00000620175 IRX6P78412 446 aaPredicted RBP20.16■□□□□ 0.82
SYN2-205ENST00000620175 HIRIP3Q9BW71 556 aaPredicted RBP20.12■□□□□ 0.81
SYN2-205ENST00000620175 TSHZ2Q9NRE2 1034 aa20.11■□□□□ 0.81
SYN2-205ENST00000620175 DDX10Q13206 875 aaKnown RBP20.1■□□□□ 0.81
SYN2-205ENST00000620175 RB1CC1Q8TDY2 1594 aa20.08■□□□□ 0.81
SYN2-205ENST00000620175 NBR1Q14596 966 aa20.06■□□□□ 0.8
SYN2-205ENST00000620175 CDK11AQ9UQ88 783 aaPredicted RBP20.03■□□□□ 0.8
SYN2-205ENST00000620175 POLR3GLQ9BT43 218 aa20■□□□□ 0.79
SYN2-205ENST00000620175 NACADO15069 1562 aa20■□□□□ 0.79
SYN2-205ENST00000620175 RTL5Q5HYW3 569 aaPredicted RBP19.96■□□□□ 0.79
SYN2-205ENST00000620175 KCNH8Q96L42 1107 aa19.93■□□□□ 0.78
SYN2-205ENST00000620175 RBM19Q9Y4C8 960 aaKnown RBP19.9■□□□□ 0.78
SYN2-205ENST00000620175 ANP32CO43423 234 aa19.9■□□□□ 0.78
SYN2-205ENST00000620175 FAM50AQ14320 339 aaKnown RBP19.85■□□□□ 0.77
SYN2-205ENST00000620175 RTN4Q9NQC3 1192 aaKnown RBP19.84■□□□□ 0.77
SYN2-205ENST00000620175 CECR2Q9BXF3 1484 aa19.84■□□□□ 0.77
SYN2-205ENST00000620175 SENP3-EIF4A1A0A087X0R7 540 aa19.84■□□□□ 0.77
SYN2-205ENST00000620175 EIF5BO60841 1220 aaKnown RBP19.82■□□□□ 0.76
SYN2-205ENST00000620175 HNRNPUQ00839 825 aaKnown RBP eCLIP19.82■□□□□ 0.76
SYN2-205ENST00000620175 CLSPNQ9HAW4 1339 aa19.8■□□□□ 0.76
SYN2-205ENST00000620175 NPM2Q86SE8 214 aaKnown RBP19.79■□□□□ 0.76
SYN2-205ENST00000620175 RSF1Q96T23 1441 aaPredicted RBP19.74■□□□□ 0.75
SYN2-205ENST00000620175 CEP162Q5TB80 1403 aa19.7■□□□□ 0.74
SYN2-205ENST00000620175 FAM9BQ8IZU0 186 aa19.65■□□□□ 0.74
SYN2-205ENST00000620175 DEKP35659 375 aaKnown RBP19.63■□□□□ 0.73
SYN2-205ENST00000620175 DAXXQ9UER7 740 aaPredicted RBP19.61■□□□□ 0.73
SYN2-205ENST00000620175 CCDC136Q96JN2 1154 aa19.56■□□□□ 0.72
SYN2-205ENST00000620175 SIN3AQ96ST3 1273 aa19.56■□□□□ 0.72
SYN2-205ENST00000620175 ANP32AP39687 249 aaKnown RBP19.55■□□□□ 0.72
SYN2-205ENST00000620175 P3H3Q8IVL6 736 aa19.55■□□□□ 0.72
SYN2-205ENST00000620175 B4GALNT3Q6L9W6 998 aa19.54■□□□□ 0.72
SYN2-205ENST00000620175 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.53■□□□□ 0.72
SYN2-205ENST00000620175 MROH2BQ7Z745 1585 aa19.49■□□□□ 0.71
SYN2-205ENST00000620175 SALL2Q9Y467 1007 aaPredicted RBP19.49■□□□□ 0.71
SYN2-205ENST00000620175 ZBTB47Q9UFB7 747 aaPredicted RBP19.46■□□□□ 0.71
SYN2-205ENST00000620175 ZNF326Q5BKZ1 582 aaKnown RBP19.43■□□□□ 0.7
SYN2-205ENST00000620175 SOGA1O94964 1423 aa19.43■□□□□ 0.7
SYN2-205ENST00000620175 LAS1LQ9Y4W2 734 aaKnown RBP19.4■□□□□ 0.7
SYN2-205ENST00000620175 CLIP1P30622 1438 aa19.39■□□□□ 0.69
SYN2-205ENST00000620175 ANO8Q9HCE9 1232 aaPredicted RBP19.38■□□□□ 0.69
SYN2-205ENST00000620175 PRKCSHP14314 528 aaPredicted RBP19.37■□□□□ 0.69
SYN2-205ENST00000620175 ARXQ96QS3 562 aa19.37■□□□□ 0.69
SYN2-205ENST00000620175 BAZ1BQ9UIG0 1483 aaKnown RBP19.33■□□□□ 0.69
SYN2-205ENST00000620175 FBLN2P98095 1184 aa19.33■□□□□ 0.69
SYN2-205ENST00000620175 MRS2Q9HD23 443 aa19.33■□□□□ 0.69
SYN2-205ENST00000620175 NOP58Q9Y2X3 529 aaKnown RBP19.33■□□□□ 0.69
SYN2-205ENST00000620175 BAZ1AQ9NRL2 1556 aaPredicted RBP19.33■□□□□ 0.68
SYN2-205ENST00000620175 TNIKQ9UKE5 1360 aa19.33■□□□□ 0.68
SYN2-205ENST00000620175 MSH5O43196 834 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms