RNA–Protein interactions for RNA: ENST00000619898.4

SPCS1-206, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPCS1, Length 4,254 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-206ENST00000619898 KCNH8Q96L42 1107 aa16.92■□□□□ 0.3
SPCS1-206ENST00000619898 ATAD2BQ9ULI0 1458 aa16.91■□□□□ 0.3
SPCS1-206ENST00000619898 TSHZ2Q9NRE2 1034 aa16.91■□□□□ 0.3
SPCS1-206ENST00000619898 RRP7BPQ9NSQ0 103 aa16.9■□□□□ 0.3
SPCS1-206ENST00000619898 CUX2O14529 1486 aa16.9■□□□□ 0.3
SPCS1-206ENST00000619898 CARMIL1Q5VZK9 1371 aa16.89■□□□□ 0.3
SPCS1-206ENST00000619898 MRS2Q9HD23 443 aa16.88■□□□□ 0.29
SPCS1-206ENST00000619898 EIF4G2P78344 907 aaKnown RBP eCLIP16.86■□□□□ 0.29
SPCS1-206ENST00000619898 KIF21BO75037 1637 aa16.86■□□□□ 0.29
SPCS1-206ENST00000619898 DAXXQ9UER7 740 aaPredicted RBP16.85■□□□□ 0.29
SPCS1-206ENST00000619898 TIMELESSQ9UNS1 1208 aa16.85■□□□□ 0.29
SPCS1-206ENST00000619898 FHAD1B1AJZ9 1412 aa16.85■□□□□ 0.29
SPCS1-206ENST00000619898 ZNF777Q9ULD5 760 aaPredicted RBP16.82■□□□□ 0.28
SPCS1-206ENST00000619898 SYNJ1O43426 1573 aa16.82■□□□□ 0.28
SPCS1-206ENST00000619898 CCER2I3L3R5 266 aa16.82■□□□□ 0.28
SPCS1-206ENST00000619898 PPP1R15AO75807 674 aaPredicted RBP16.78■□□□□ 0.28
SPCS1-206ENST00000619898 RBM19Q9Y4C8 960 aaKnown RBP16.78■□□□□ 0.28
SPCS1-206ENST00000619898 ANP32AP39687 249 aaKnown RBP16.77■□□□□ 0.28
SPCS1-206ENST00000619898 SLC4A1APQ9BWU0 796 aaKnown RBP16.75■□□□□ 0.27
SPCS1-206ENST00000619898 CCDC136Q96JN2 1154 aa16.73■□□□□ 0.27
SPCS1-206ENST00000619898 ARHGAP35Q9NRY4 1499 aa16.73■□□□□ 0.27
SPCS1-206ENST00000619898 NPM2Q86SE8 214 aaKnown RBP16.71■□□□□ 0.27
SPCS1-206ENST00000619898 TMC1Q8TDI8 760 aa16.7■□□□□ 0.26
SPCS1-206ENST00000619898 ARAP1Q96P48 1450 aa16.7■□□□□ 0.26
SPCS1-206ENST00000619898 SALL2Q9Y467 1007 aaPredicted RBP16.69■□□□□ 0.26
SPCS1-206ENST00000619898 SENP3-EIF4A1A0A087X0R7 540 aa16.69■□□□□ 0.26
SPCS1-206ENST00000619898 NBR1Q14596 966 aa16.68■□□□□ 0.26
SPCS1-206ENST00000619898 HSPA5P11021 654 aaKnown RBP16.66■□□□□ 0.26
SPCS1-206ENST00000619898 PPP4R2Q9NY27 417 aa16.66■□□□□ 0.26
SPCS1-206ENST00000619898 FHOD3Q2V2M9 1422 aa16.65■□□□□ 0.26
SPCS1-206ENST00000619898 RRBP1Q9P2E9 1410 aaKnown RBP16.64■□□□□ 0.25
SPCS1-206ENST00000619898 EIF4G1Q04637 1599 aaKnown RBP16.64■□□□□ 0.25
SPCS1-206ENST00000619898 B4GALNT3Q6L9W6 998 aa16.64■□□□□ 0.25
SPCS1-206ENST00000619898 PRXQ9BXM0 1461 aa16.62■□□□□ 0.25
SPCS1-206ENST00000619898 KDM2AQ9Y2K7 1162 aa16.62■□□□□ 0.25
SPCS1-206ENST00000619898 ERICH3Q5RHP9 1530 aa16.61■□□□□ 0.25
SPCS1-206ENST00000619898 IGF1RP08069 1367 aa16.6■□□□□ 0.25
SPCS1-206ENST00000619898 PHLDB1Q86UU1 1377 aa16.59■□□□□ 0.25
SPCS1-206ENST00000619898 ZBTB47Q9UFB7 747 aaPredicted RBP16.59■□□□□ 0.25
SPCS1-206ENST00000619898 FOXD1Q16676 465 aa16.58■□□□□ 0.25
SPCS1-206ENST00000619898 CADPSQ9ULU8 1353 aa16.56■□□□□ 0.24
SPCS1-206ENST00000619898 BCL11AQ9H165 835 aa16.56■□□□□ 0.24
SPCS1-206ENST00000619898 FMN1Q68DA7 1419 aa16.56■□□□□ 0.24
SPCS1-206ENST00000619898 TOP2BQ02880 1626 aa16.55■□□□□ 0.24
SPCS1-206ENST00000619898 LRRC9Q6ZRR7 1453 aa16.52■□□□□ 0.24
SPCS1-206ENST00000619898 MPHOSPH9Q99550 1183 aa16.51■□□□□ 0.23
SPCS1-206ENST00000619898 TDRD9Q8NDG6 1382 aaKnown RBP16.5■□□□□ 0.23
SPCS1-206ENST00000619898 TSPY4P0CV99 314 aa16.5■□□□□ 0.23
SPCS1-206ENST00000619898 TSPY10P0CW01 314 aa16.5■□□□□ 0.23
SPCS1-206ENST00000619898 L3MBTL2Q969R5 705 aa16.5■□□□□ 0.23
SPCS1-206ENST00000619898 CFDP1Q9UEE9 299 aaPredicted RBP16.49■□□□□ 0.23
SPCS1-206ENST00000619898 CHMP7Q8WUX9 453 aaPredicted RBP16.49■□□□□ 0.23
SPCS1-206ENST00000619898 CCDC18Q5T9S5 1454 aa16.48■□□□□ 0.23
SPCS1-206ENST00000619898 ERICH6BQ5W0A0 696 aa16.47■□□□□ 0.23
SPCS1-206ENST00000619898 CARD11Q9BXL7 1154 aa16.46■□□□□ 0.23
SPCS1-206ENST00000619898 FGD5Q6ZNL6 1462 aa16.46■□□□□ 0.23
SPCS1-206ENST00000619898 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.45■□□□□ 0.22
SPCS1-206ENST00000619898 CUX1P39880 1505 aa16.45■□□□□ 0.22
SPCS1-206ENST00000619898 NOP58Q9Y2X3 529 aaKnown RBP16.45■□□□□ 0.22
SPCS1-206ENST00000619898 NCAPD3P42695 1498 aa16.45■□□□□ 0.22
SPCS1-206ENST00000619898 NPM1P06748 294 aaKnown RBP eCLIP16.43■□□□□ 0.22
SPCS1-206ENST00000619898 BICRAQ9NZM4 1560 aa16.42■□□□□ 0.22
SPCS1-206ENST00000619898 WDR97A6NE52 1622 aa16.42■□□□□ 0.22
SPCS1-206ENST00000619898 FGD6Q6ZV73 1430 aa16.41■□□□□ 0.22
SPCS1-206ENST00000619898 RGL3Q3MIN7 710 aa16.4■□□□□ 0.22
SPCS1-206ENST00000619898 CANXP27824 592 aaKnown RBP16.4■□□□□ 0.22
SPCS1-206ENST00000619898 CFTRP13569 1480 aa16.39■□□□□ 0.21
SPCS1-206ENST00000619898 PRKRIP1Q9H875 184 aaPredicted RBP16.39■□□□□ 0.21
SPCS1-206ENST00000619898 TIAM1Q13009 1591 aa16.38■□□□□ 0.21
SPCS1-206ENST00000619898 UACAQ9BZF9 1416 aa16.37■□□□□ 0.21
SPCS1-206ENST00000619898 FANCD2Q9BXW9 1451 aa16.37■□□□□ 0.21
SPCS1-206ENST00000619898 PLEKHD1A6NEE1 506 aa16.36■□□□□ 0.21
SPCS1-206ENST00000619898 RAD54L2Q9Y4B4 1467 aa16.36■□□□□ 0.21
SPCS1-206ENST00000619898 PEG3Q9GZU2 1588 aa16.36■□□□□ 0.21
SPCS1-206ENST00000619898 DEKP35659 375 aaKnown RBP16.35■□□□□ 0.21
SPCS1-206ENST00000619898 PKD2Q13563 968 aa16.34■□□□□ 0.21
SPCS1-206ENST00000619898 WDR43Q15061 677 aaKnown RBP eCLIP16.33■□□□□ 0.21
SPCS1-206ENST00000619898 WASHC2AQ641Q2 1341 aa16.33■□□□□ 0.2
SPCS1-206ENST00000619898 UNC13AQ9UPW8 1703 aa16.33■□□□□ 0.2
SPCS1-206ENST00000619898 CASKIN1Q8WXD9 1431 aa16.32■□□□□ 0.2
SPCS1-206ENST00000619898 CHGAP10645 457 aaKnown RBP16.32■□□□□ 0.2
SPCS1-206ENST00000619898 DCAF11Q8TEB1 546 aa16.32■□□□□ 0.2
SPCS1-206ENST00000619898 FANCIQ9NVI1 1328 aa16.31■□□□□ 0.2
SPCS1-206ENST00000619898 NUDCQ9Y266 331 aa16.31■□□□□ 0.2
SPCS1-206ENST00000619898 MYOM3Q5VTT5 1437 aa16.3■□□□□ 0.2
SPCS1-206ENST00000619898 LAS1LQ9Y4W2 734 aaKnown RBP16.3■□□□□ 0.2
SPCS1-206ENST00000619898 ZBED9Q6R2W3 1325 aa16.3■□□□□ 0.2
SPCS1-206ENST00000619898 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.28■□□□□ 0.2
SPCS1-206ENST00000619898 ESF1Q9H501 851 aaKnown RBP16.28■□□□□ 0.2
SPCS1-206ENST00000619898 FYCO1Q9BQS8 1478 aa16.27■□□□□ 0.2
SPCS1-206ENST00000619898 PLPPR3Q6T4P5 718 aa16.27■□□□□ 0.2
SPCS1-206ENST00000619898 CC2D1BQ5T0F9 858 aaKnown RBP16.26■□□□□ 0.19
SPCS1-206ENST00000619898 NCOA2Q15596 1464 aa16.25■□□□□ 0.19
SPCS1-206ENST00000619898 CCDC7Q96M83 1385 aa16.25■□□□□ 0.19
SPCS1-206ENST00000619898 HMGXB3Q12766 1538 aa16.25■□□□□ 0.19
SPCS1-206ENST00000619898 NEFMP07197 916 aa16.23■□□□□ 0.19
SPCS1-206ENST00000619898 BIVM-ERCC5R4GMW8 1640 aa16.23■□□□□ 0.19
SPCS1-206ENST00000619898 MAPKBP1O60336 1514 aa16.23■□□□□ 0.19
SPCS1-206ENST00000619898 CNTLNQ9NXG0 1405 aa16.23■□□□□ 0.19
SPCS1-206ENST00000619898 HFM1A2PYH4 1435 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms