RNA–Protein interactions for RNA: ENST00000618865.4

SEMA3B-213, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SEMA3B, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-213ENST00000618865 WDR97A6NE52 1622 aa24.94■■□□□ 1.58
SEMA3B-213ENST00000618865 ITGAEP38570 1179 aa24.93■■□□□ 1.58
SEMA3B-213ENST00000618865 PCF11O94913 1555 aaKnown RBP24.93■■□□□ 1.58
SEMA3B-213ENST00000618865 MAP3K1Q13233 1512 aa24.92■■□□□ 1.58
SEMA3B-213ENST00000618865 CUL7Q14999 1698 aa24.91■■□□□ 1.58
SEMA3B-213ENST00000618865 FHOD3Q2V2M9 1422 aa24.9■■□□□ 1.58
SEMA3B-213ENST00000618865 LRRC9Q6ZRR7 1453 aa24.9■■□□□ 1.58
SEMA3B-213ENST00000618865 CTTNBP2Q8WZ74 1663 aa24.87■■□□□ 1.57
SEMA3B-213ENST00000618865 TDRD9Q8NDG6 1382 aaKnown RBP24.86■■□□□ 1.57
SEMA3B-213ENST00000618865 KIF21AQ7Z4S6 1674 aa24.86■■□□□ 1.57
SEMA3B-213ENST00000618865 FHAD1B1AJZ9 1412 aa24.86■■□□□ 1.57
SEMA3B-213ENST00000618865 CFAP43Q8NDM7 1665 aa24.86■■□□□ 1.57
SEMA3B-213ENST00000618865 NEUROD1Q13562 356 aa24.85■■□□□ 1.57
SEMA3B-213ENST00000618865 PHLDB1Q86UU1 1377 aa24.84■■□□□ 1.57
SEMA3B-213ENST00000618865 ATP1B4Q9UN42 357 aaPredicted RBP24.84■■□□□ 1.57
SEMA3B-213ENST00000618865 ABCA5Q8WWZ7 1642 aa24.83■■□□□ 1.56
SEMA3B-213ENST00000618865 CLSPNQ9HAW4 1339 aa24.81■■□□□ 1.56
SEMA3B-213ENST00000618865 ACIN1Q9UKV3 1341 aaKnown RBP24.81■■□□□ 1.56
SEMA3B-213ENST00000618865 PDS5BQ9NTI5 1447 aa24.8■■□□□ 1.56
SEMA3B-213ENST00000618865 EFCAB5A4FU69 1503 aa24.79■■□□□ 1.56
SEMA3B-213ENST00000618865 GAPVD1Q14C86 1478 aa24.76■■□□□ 1.55
SEMA3B-213ENST00000618865 FYCO1Q9BQS8 1478 aa24.74■■□□□ 1.55
SEMA3B-213ENST00000618865 RAB3GAP2Q9H2M9 1393 aa24.74■■□□□ 1.55
SEMA3B-213ENST00000618865 MIER1Q8N108 512 aa24.73■■□□□ 1.55
SEMA3B-213ENST00000618865 CASKIN1Q8WXD9 1431 aa24.72■■□□□ 1.55
SEMA3B-213ENST00000618865 FAM50AQ14320 339 aaKnown RBP24.69■■□□□ 1.54
SEMA3B-213ENST00000618865 TARBP1Q13395 1621 aaKnown RBP24.68■■□□□ 1.54
SEMA3B-213ENST00000618865 AQRO60306 1485 aaKnown RBP eCLIP24.68■■□□□ 1.545e-8■■■■□ 25.4
SEMA3B-213ENST00000618865 SNAPC4Q5SXM2 1469 aa24.66■■□□□ 1.54
SEMA3B-213ENST00000618865 SLC24A1O60721 1099 aa24.66■■□□□ 1.54
SEMA3B-213ENST00000618865 SAMD9Q5K651 1589 aa24.64■■□□□ 1.54
SEMA3B-213ENST00000618865 MAPKBP1O60336 1514 aa24.64■■□□□ 1.53
SEMA3B-213ENST00000618865 LRRIQ1Q96JM4 1722 aa24.64■■□□□ 1.53
SEMA3B-213ENST00000618865 CENPBP07199 599 aaPredicted RBP24.63■■□□□ 1.53
SEMA3B-213ENST00000618865 SETD5Q9C0A6 1442 aa24.63■■□□□ 1.53
SEMA3B-213ENST00000618865 FMN1Q68DA7 1419 aa24.62■■□□□ 1.53
SEMA3B-213ENST00000618865 YTHDC1Q96MU7 727 aaKnown RBP24.61■■□□□ 1.53
SEMA3B-213ENST00000618865 PBRM1Q86U86 1689 aa24.56■■□□□ 1.52
SEMA3B-213ENST00000618865 GTF3C3Q9Y5Q9 886 aa24.53■■□□□ 1.52
SEMA3B-213ENST00000618865 GRIN2BQ13224 1484 aa24.51■■□□□ 1.51
SEMA3B-213ENST00000618865 MTUS2Q5JR59 1369 aa24.49■■□□□ 1.51
SEMA3B-213ENST00000618865 FGD6Q6ZV73 1430 aa24.49■■□□□ 1.51
SEMA3B-213ENST00000618865 MRC2Q9UBG0 1479 aa24.47■■□□□ 1.51
SEMA3B-213ENST00000618865 BCL11AQ9H165 835 aa24.47■■□□□ 1.51
SEMA3B-213ENST00000618865 ERICH6Q7L0X2 663 aa24.46■■□□□ 1.51
SEMA3B-213ENST00000618865 SIN3AQ96ST3 1273 aa24.45■■□□□ 1.51
SEMA3B-213ENST00000618865 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.45■■□□□ 1.5
SEMA3B-213ENST00000618865 ADAMTS12P58397 1594 aa24.44■■□□□ 1.5
SEMA3B-213ENST00000618865 NCOA2Q15596 1464 aa24.42■■□□□ 1.5
SEMA3B-213ENST00000618865 PTPRKQ15262 1439 aa24.41■■□□□ 1.5
SEMA3B-213ENST00000618865 MAGI3Q5TCQ9 1506 aa24.41■■□□□ 1.5
SEMA3B-213ENST00000618865 ZNF608Q9ULD9 1512 aaPredicted RBP24.4■■□□□ 1.5
SEMA3B-213ENST00000618865 THOC2Q8NI27 1593 aaKnown RBP24.39■■□□□ 1.5
SEMA3B-213ENST00000618865 IQGAP2Q13576 1575 aa24.38■■□□□ 1.49
SEMA3B-213ENST00000618865 SUPT6HQ7KZ85 1726 aaKnown RBP24.37■■□□□ 1.49
SEMA3B-213ENST00000618865 MYOM3Q5VTT5 1437 aa24.34■■□□□ 1.49
SEMA3B-213ENST00000618865 EHBP1L1Q8N3D4 1523 aa24.34■■□□□ 1.49
SEMA3B-213ENST00000618865 UGGT2Q9NYU1 1516 aa24.3■■□□□ 1.48
SEMA3B-213ENST00000618865 WDR62O43379 1518 aa24.29■■□□□ 1.48
SEMA3B-213ENST00000618865 CCDC18Q5T9S5 1454 aa24.29■■□□□ 1.48
SEMA3B-213ENST00000618865 ARHGEF11O15085 1522 aa24.29■■□□□ 1.48
SEMA3B-213ENST00000618865 PTPN23Q9H3S7 1636 aa24.28■■□□□ 1.48
SEMA3B-213ENST00000618865 IFT140Q96RY7 1462 aa24.28■■□□□ 1.48
SEMA3B-213ENST00000618865 ARID3CA6NKF2 412 aa24.28■■□□□ 1.48
SEMA3B-213ENST00000618865 HECW1Q76N89 1606 aa24.28■■□□□ 1.48
SEMA3B-213ENST00000618865 CDK13Q14004 1512 aaKnown RBP24.27■■□□□ 1.48
SEMA3B-213ENST00000618865 HFM1A2PYH4 1435 aa24.27■■□□□ 1.48
SEMA3B-213ENST00000618865 EPRSP07814 1512 aaKnown RBP24.25■■□□□ 1.47
SEMA3B-213ENST00000618865 NAIPQ13075 1403 aa24.24■■□□□ 1.47
SEMA3B-213ENST00000618865 EIF4G3O43432 1585 aaKnown RBP24.2■■□□□ 1.46
SEMA3B-213ENST00000618865 UACAQ9BZF9 1416 aa24.18■■□□□ 1.46
SEMA3B-213ENST00000618865 DISP1Q96F81 1524 aa24.16■■□□□ 1.46
SEMA3B-213ENST00000618865 PPP1R15AO75807 674 aaPredicted RBP24.15■■□□□ 1.46
SEMA3B-213ENST00000618865 CHIC2Q9UKJ5 165 aa24.15■■□□□ 1.46
SEMA3B-213ENST00000618865 TCOF1Q13428 1488 aaKnown RBP24.15■■□□□ 1.46
SEMA3B-213ENST00000618865 KIAA0556O60303 1618 aa24.14■■□□□ 1.46
SEMA3B-213ENST00000618865 RRP7BPQ9NSQ0 103 aa24.14■■□□□ 1.45
SEMA3B-213ENST00000618865 KIAA0586Q9BVV6 1533 aa24.14■■□□□ 1.45
SEMA3B-213ENST00000618865 HIRIP3Q9BW71 556 aaPredicted RBP24.13■■□□□ 1.45
SEMA3B-213ENST00000618865 TIMELESSQ9UNS1 1208 aa24.13■■□□□ 1.45
SEMA3B-213ENST00000618865 GRIN2AQ12879 1464 aa24.13■■□□□ 1.45
SEMA3B-213ENST00000618865 ERCC6Q03468 1493 aa24.11■■□□□ 1.45
SEMA3B-213ENST00000618865 KDM6BO15054 1643 aa24.1■■□□□ 1.45
SEMA3B-213ENST00000618865 KCNH8Q96L42 1107 aa24.08■■□□□ 1.45
SEMA3B-213ENST00000618865 DDX10Q13206 875 aaKnown RBP24.07■■□□□ 1.44
SEMA3B-213ENST00000618865 GCC2Q8IWJ2 1684 aa24.07■■□□□ 1.44
SEMA3B-213ENST00000618865 NUP153P49790 1475 aaKnown RBP24.06■■□□□ 1.44
SEMA3B-213ENST00000618865 TONSLQ96HA7 1378 aa24.06■■□□□ 1.44
SEMA3B-213ENST00000618865 DENND4BO75064 1496 aaPredicted RBP24.03■■□□□ 1.44
SEMA3B-213ENST00000618865 RAPGEF6Q8TEU7 1601 aa24.03■■□□□ 1.44
SEMA3B-213ENST00000618865 MIA2Q96PC5 1412 aa24.02■■□□□ 1.44
SEMA3B-213ENST00000618865 CEP170Q5SW79 1584 aa24.02■■□□□ 1.44
SEMA3B-213ENST00000618865 KDM5BQ9UGL1 1544 aa23.99■■□□□ 1.43
SEMA3B-213ENST00000618865 MAGI1Q96QZ7 1491 aaPredicted RBP23.98■■□□□ 1.43
SEMA3B-213ENST00000618865 CHMP7Q8WUX9 453 aaPredicted RBP23.97■■□□□ 1.43
SEMA3B-213ENST00000618865 ZNF644Q9H582 1327 aaPredicted RBP23.97■■□□□ 1.43
SEMA3B-213ENST00000618865 FBLN2P98095 1184 aa23.97■■□□□ 1.43
SEMA3B-213ENST00000618865 TRIM52Q96A61 297 aa23.96■■□□□ 1.43
SEMA3B-213ENST00000618865 AKNAQ7Z591 1439 aa23.95■■□□□ 1.42
SEMA3B-213ENST00000618865 SYNJ2O15056 1496 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms