RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 KANK4Q5T7N3 995 aaPredicted RBP19.17■□□□□ 0.66
TNFRSF11A-205ENST00000616710 ABCC8Q09428 1581 aa19.16■□□□□ 0.66
TNFRSF11A-205ENST00000616710 WRNQ14191 1432 aaPredicted RBP eCLIP19.14■□□□□ 0.66
TNFRSF11A-205ENST00000616710 CECR2Q9BXF3 1484 aa19.13■□□□□ 0.65
TNFRSF11A-205ENST00000616710 RUSC2Q8N2Y8 1516 aa19.13■□□□□ 0.65
TNFRSF11A-205ENST00000616710 MRS2Q9HD23 443 aa19.12■□□□□ 0.65
TNFRSF11A-205ENST00000616710 TIMELESSQ9UNS1 1208 aa19.11■□□□□ 0.65
TNFRSF11A-205ENST00000616710 P3H3Q8IVL6 736 aa19.08■□□□□ 0.65
TNFRSF11A-205ENST00000616710 GOLGA3Q08378 1498 aa19.03■□□□□ 0.64
TNFRSF11A-205ENST00000616710 TONSLQ96HA7 1378 aa19.02■□□□□ 0.64
TNFRSF11A-205ENST00000616710 CCER2I3L3R5 266 aa19■□□□□ 0.63
TNFRSF11A-205ENST00000616710 IPO9Q96P70 1041 aaKnown RBP19■□□□□ 0.63
TNFRSF11A-205ENST00000616710 BRPF3Q9ULD4 1205 aa18.99■□□□□ 0.63
TNFRSF11A-205ENST00000616710 ERICH6BQ5W0A0 696 aa18.98■□□□□ 0.63
TNFRSF11A-205ENST00000616710 ZNF326Q5BKZ1 582 aaKnown RBP18.97■□□□□ 0.63
TNFRSF11A-205ENST00000616710 SLC4A3P48751 1232 aa18.91■□□□□ 0.62
TNFRSF11A-205ENST00000616710 PPP1R15AO75807 674 aaPredicted RBP18.91■□□□□ 0.62
TNFRSF11A-205ENST00000616710 RAB3GAP2Q9H2M9 1393 aa18.9■□□□□ 0.62
TNFRSF11A-205ENST00000616710 VPS8Q8N3P4 1428 aa18.9■□□□□ 0.62
TNFRSF11A-205ENST00000616710 ARID4BQ4LE39 1312 aaPredicted RBP18.89■□□□□ 0.61
TNFRSF11A-205ENST00000616710 MROH2BQ7Z745 1585 aa18.89■□□□□ 0.61
TNFRSF11A-205ENST00000616710 CCDC184Q52MB2 194 aa18.85■□□□□ 0.61
TNFRSF11A-205ENST00000616710 CCNB3Q8WWL7 1395 aa18.83■□□□□ 0.6
TNFRSF11A-205ENST00000616710 GLIPR1L2Q4G1C9 344 aa18.78■□□□□ 0.6
TNFRSF11A-205ENST00000616710 CHIC2Q9UKJ5 165 aa18.78■□□□□ 0.6
TNFRSF11A-205ENST00000616710 VSIG10Q8N0Z9 540 aa18.78■□□□□ 0.6
TNFRSF11A-205ENST00000616710 WIZO95785 1651 aa18.76■□□□□ 0.59
TNFRSF11A-205ENST00000616710 PPM1GO15355 546 aaPredicted RBP18.76■□□□□ 0.59
TNFRSF11A-205ENST00000616710 UBE2Q2Q8WVN8 375 aa18.75■□□□□ 0.59
TNFRSF11A-205ENST00000616710 NAP1L5Q96NT1 182 aaPredicted RBP18.74■□□□□ 0.59
TNFRSF11A-205ENST00000616710 CEP164Q9UPV0 1460 aa18.74■□□□□ 0.59
TNFRSF11A-205ENST00000616710 EEA1Q15075 1411 aa18.73■□□□□ 0.59
TNFRSF11A-205ENST00000616710 PKNOX2Q96KN3 472 aa18.73■□□□□ 0.59
TNFRSF11A-205ENST00000616710 HSPA5P11021 654 aaKnown RBP18.72■□□□□ 0.59
TNFRSF11A-205ENST00000616710 EIF4G2P78344 907 aaKnown RBP eCLIP18.72■□□□□ 0.59
TNFRSF11A-205ENST00000616710 TMC1Q8TDI8 760 aa18.71■□□□□ 0.59
TNFRSF11A-205ENST00000616710 ARID3CA6NKF2 412 aa18.69■□□□□ 0.58
TNFRSF11A-205ENST00000616710 GSE1Q14687 1217 aa18.69■□□□□ 0.58
TNFRSF11A-205ENST00000616710 SKAP1Q86WV1 359 aa18.69■□□□□ 0.58
TNFRSF11A-205ENST00000616710 RAPGEF2Q9Y4G8 1499 aa18.67■□□□□ 0.58
TNFRSF11A-205ENST00000616710 RRP7BPQ9NSQ0 103 aa18.65■□□□□ 0.58
TNFRSF11A-205ENST00000616710 FRAT1Q92837 279 aaPredicted RBP18.64■□□□□ 0.58
TNFRSF11A-205ENST00000616710 PDE4AP27815 886 aa18.64■□□□□ 0.57
TNFRSF11A-205ENST00000616710 WDR97A6NE52 1622 aa18.63■□□□□ 0.57
TNFRSF11A-205ENST00000616710 RGS3P49796 1198 aa18.63■□□□□ 0.57
TNFRSF11A-205ENST00000616710 SETD5Q9C0A6 1442 aa18.63■□□□□ 0.57
TNFRSF11A-205ENST00000616710 AKNAQ7Z591 1439 aa18.61■□□□□ 0.57
TNFRSF11A-205ENST00000616710 FOXD1Q16676 465 aa18.61■□□□□ 0.57
TNFRSF11A-205ENST00000616710 EXOC6Q8TAG9 804 aa18.6■□□□□ 0.57
TNFRSF11A-205ENST00000616710 NFKBIBQ15653 356 aa18.57■□□□□ 0.56
TNFRSF11A-205ENST00000616710 PRKRIP1Q9H875 184 aaPredicted RBP18.56■□□□□ 0.56
TNFRSF11A-205ENST00000616710 PLIN1O60240 522 aa18.55■□□□□ 0.56
TNFRSF11A-205ENST00000616710 DDRGK1Q96HY6 314 aa18.55■□□□□ 0.56
TNFRSF11A-205ENST00000616710 GZF1Q9H116 711 aaPredicted RBP18.54■□□□□ 0.56
TNFRSF11A-205ENST00000616710 ARID3AQ99856 593 aa18.53■□□□□ 0.56
TNFRSF11A-205ENST00000616710 SLKQ9H2G2 1235 aaPredicted RBP18.53■□□□□ 0.56
TNFRSF11A-205ENST00000616710 NUDCQ9Y266 331 aa18.53■□□□□ 0.56
TNFRSF11A-205ENST00000616710 SPRYD3Q8NCJ5 442 aa18.53■□□□□ 0.56
TNFRSF11A-205ENST00000616710 WASHC2AQ641Q2 1341 aa18.53■□□□□ 0.56
TNFRSF11A-205ENST00000616710 USP35Q9P2H5 1018 aa18.52■□□□□ 0.56
TNFRSF11A-205ENST00000616710 ZBED9Q6R2W3 1325 aa18.51■□□□□ 0.55
TNFRSF11A-205ENST00000616710 FRAT2O75474 233 aaPredicted RBP18.49■□□□□ 0.55
TNFRSF11A-205ENST00000616710 RSPH6AQ9H0K4 717 aa18.49■□□□□ 0.55
TNFRSF11A-205ENST00000616710 TCERG1O14776 1098 aaKnown RBP18.48■□□□□ 0.55
TNFRSF11A-205ENST00000616710 HSP90AA2PQ14568 343 aaPredicted RBP18.45■□□□□ 0.54
TNFRSF11A-205ENST00000616710 NACADO15069 1562 aa18.44■□□□□ 0.54
TNFRSF11A-205ENST00000616710 PNNQ9H307 717 aaKnown RBP18.43■□□□□ 0.54
TNFRSF11A-205ENST00000616710 KIF21BO75037 1637 aa18.43■□□□□ 0.54
TNFRSF11A-205ENST00000616710 RCAN3Q9UKA8 241 aa18.42■□□□□ 0.54
TNFRSF11A-205ENST00000616710 A0A0U1RQG5 324 aaPredicted RBP18.41■□□□□ 0.54
TNFRSF11A-205ENST00000616710 HSP90AA1P07900 732 aaKnown RBP18.41■□□□□ 0.54
TNFRSF11A-205ENST00000616710 ZMYND15Q9H091 742 aa18.41■□□□□ 0.54
TNFRSF11A-205ENST00000616710 KDM2AQ9Y2K7 1162 aa18.4■□□□□ 0.54
TNFRSF11A-205ENST00000616710 C11orf95C9JLR9 678 aaPredicted RBP18.38■□□□□ 0.53
TNFRSF11A-205ENST00000616710 L3MBTL2Q969R5 705 aa18.38■□□□□ 0.53
TNFRSF11A-205ENST00000616710 BACH2Q9BYV9 841 aa18.36■□□□□ 0.53
TNFRSF11A-205ENST00000616710 CANXP27824 592 aaKnown RBP18.33■□□□□ 0.53
TNFRSF11A-205ENST00000616710 RRP1P56182 461 aaKnown RBP18.33■□□□□ 0.52
TNFRSF11A-205ENST00000616710 PODXL2Q9NZ53 605 aa18.31■□□□□ 0.52
TNFRSF11A-205ENST00000616710 PHLDB1Q86UU1 1377 aa18.3■□□□□ 0.52
TNFRSF11A-205ENST00000616710 ZBTB7CA1YPR0 619 aa18.29■□□□□ 0.52
TNFRSF11A-205ENST00000616710 CRBNQ96SW2 442 aa18.29■□□□□ 0.52
TNFRSF11A-205ENST00000616710 TRIM44Q96DX7 344 aaPredicted RBP18.29■□□□□ 0.52
TNFRSF11A-205ENST00000616710 POGKQ9P215 609 aa18.29■□□□□ 0.52
TNFRSF11A-205ENST00000616710 BAZ1AQ9NRL2 1556 aaPredicted RBP18.29■□□□□ 0.52
TNFRSF11A-205ENST00000616710 RRBP1Q9P2E9 1410 aaKnown RBP18.29■□□□□ 0.52
TNFRSF11A-205ENST00000616710 ARAP1Q96P48 1450 aa18.28■□□□□ 0.52
TNFRSF11A-205ENST00000616710 CDCA7LQ96GN5 454 aa18.28■□□□□ 0.52
TNFRSF11A-205ENST00000616710 MTUS2Q5JR59 1369 aa18.27■□□□□ 0.52
TNFRSF11A-205ENST00000616710 SLC4A1APQ9BWU0 796 aaKnown RBP18.27■□□□□ 0.52
TNFRSF11A-205ENST00000616710 PLEKHG5O94827 1062 aa18.27■□□□□ 0.51
TNFRSF11A-205ENST00000616710 DCAF11Q8TEB1 546 aa18.27■□□□□ 0.51
TNFRSF11A-205ENST00000616710 MAPKBP1O60336 1514 aa18.26■□□□□ 0.51
TNFRSF11A-205ENST00000616710 CC2D1BQ5T0F9 858 aaKnown RBP18.25■□□□□ 0.51
TNFRSF11A-205ENST00000616710 FAM43AQ8N2R8 423 aa18.24■□□□□ 0.51
TNFRSF11A-205ENST00000616710 WASHC2CQ9Y4E1 1318 aa18.22■□□□□ 0.51
TNFRSF11A-205ENST00000616710 KIF7Q2M1P5 1343 aa18.22■□□□□ 0.51
TNFRSF11A-205ENST00000616710 AMER1Q5JTC6 1135 aaPredicted RBP18.21■□□□□ 0.51
TNFRSF11A-205ENST00000616710 UPF2Q9HAU5 1272 aaKnown RBP18.21■□□□□ 0.51
TNFRSF11A-205ENST00000616710 BECN1Q14457 450 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms