RNA–Protein interactions for RNA: ENST00000616371.4

AP4S1-211, Transcript of adaptor related protein complex 4 subunit sigma 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AP4S1, Length 4,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1-211ENST00000616371 FBLN2P98095 1184 aa11.58□□□□□ -0.56
AP4S1-211ENST00000616371 FGD5Q6ZNL6 1462 aa11.57□□□□□ -0.56
AP4S1-211ENST00000616371 KANK4Q5T7N3 995 aaPredicted RBP11.56□□□□□ -0.56
AP4S1-211ENST00000616371 TRIM52Q96A61 297 aa11.54□□□□□ -0.56
AP4S1-211ENST00000616371 RBM19Q9Y4C8 960 aaKnown RBP11.53□□□□□ -0.56
AP4S1-211ENST00000616371 ANP32CO43423 234 aa11.52□□□□□ -0.57
AP4S1-211ENST00000616371 TDRD9Q8NDG6 1382 aaKnown RBP11.52□□□□□ -0.57
AP4S1-211ENST00000616371 NESP48681 1621 aa11.51□□□□□ -0.57
AP4S1-211ENST00000616371 ARID3CA6NKF2 412 aa11.51□□□□□ -0.57
AP4S1-211ENST00000616371 TRHP20396 242 aaPredicted RBP11.51□□□□□ -0.57
AP4S1-211ENST00000616371 IGF1RP08069 1367 aa11.5□□□□□ -0.57
AP4S1-211ENST00000616371 ERICH3Q5RHP9 1530 aa11.5□□□□□ -0.57
AP4S1-211ENST00000616371 HIRIP3Q9BW71 556 aaPredicted RBP11.49□□□□□ -0.57
AP4S1-211ENST00000616371 BIVM-ERCC5R4GMW8 1640 aa11.49□□□□□ -0.57
AP4S1-211ENST00000616371 PRXQ9BXM0 1461 aa11.49□□□□□ -0.57
AP4S1-211ENST00000616371 ERCC6Q03468 1493 aa11.48□□□□□ -0.57
AP4S1-211ENST00000616371 RAD54L2Q9Y4B4 1467 aa11.48□□□□□ -0.57
AP4S1-211ENST00000616371 FHAD1B1AJZ9 1412 aa11.48□□□□□ -0.57
AP4S1-211ENST00000616371 CCNB3Q8WWL7 1395 aa11.47□□□□□ -0.57
AP4S1-211ENST00000616371 MTUS2Q5JR59 1369 aa11.47□□□□□ -0.57
AP4S1-211ENST00000616371 CDK11AQ9UQ88 783 aaPredicted RBP11.45□□□□□ -0.58
AP4S1-211ENST00000616371 SIN3AQ96ST3 1273 aa11.45□□□□□ -0.58
AP4S1-211ENST00000616371 DNAJC5Q9H3Z4 198 aa11.44□□□□□ -0.58
AP4S1-211ENST00000616371 CHMP7Q8WUX9 453 aaPredicted RBP11.43□□□□□ -0.58
AP4S1-211ENST00000616371 TOPBP1Q92547 1522 aa11.43□□□□□ -0.58
AP4S1-211ENST00000616371 RAB3GAP2Q9H2M9 1393 aa11.42□□□□□ -0.58
AP4S1-211ENST00000616371 DNMBPQ6XZF7 1577 aa11.41□□□□□ -0.58
AP4S1-211ENST00000616371 IRX6P78412 446 aaPredicted RBP11.41□□□□□ -0.58
AP4S1-211ENST00000616371 POLA1P09884 1462 aaPredicted RBP11.41□□□□□ -0.58
AP4S1-211ENST00000616371 FHOD3Q2V2M9 1422 aa11.4□□□□□ -0.58
AP4S1-211ENST00000616371 DNAJC5BQ9UF47 199 aa11.39□□□□□ -0.59
AP4S1-211ENST00000616371 HNRNPUQ00839 825 aaKnown RBP eCLIP11.39□□□□□ -0.59
AP4S1-211ENST00000616371 ARAP1Q96P48 1450 aa11.38□□□□□ -0.59
AP4S1-211ENST00000616371 CCER2I3L3R5 266 aa11.38□□□□□ -0.59
AP4S1-211ENST00000616371 GAPVD1Q14C86 1478 aa11.38□□□□□ -0.59
AP4S1-211ENST00000616371 LAMC3Q9Y6N6 1575 aa11.38□□□□□ -0.59
AP4S1-211ENST00000616371 RRBP1Q9P2E9 1410 aaKnown RBP11.38□□□□□ -0.59
AP4S1-211ENST00000616371 ARHGAP35Q9NRY4 1499 aa11.36□□□□□ -0.59
AP4S1-211ENST00000616371 FMN1Q68DA7 1419 aa11.36□□□□□ -0.59
AP4S1-211ENST00000616371 SETD5Q9C0A6 1442 aa11.35□□□□□ -0.59
AP4S1-211ENST00000616371 PPP1R15AO75807 674 aaPredicted RBP11.35□□□□□ -0.59
AP4S1-211ENST00000616371 ABCA10Q8WWZ4 1543 aa11.33□□□□□ -0.6
AP4S1-211ENST00000616371 TONSLQ96HA7 1378 aa11.32□□□□□ -0.6
AP4S1-211ENST00000616371 MSH5O43196 834 aa11.31□□□□□ -0.6
AP4S1-211ENST00000616371 CHIC2Q9UKJ5 165 aa11.31□□□□□ -0.6
AP4S1-211ENST00000616371 TIMELESSQ9UNS1 1208 aa11.31□□□□□ -0.6
AP4S1-211ENST00000616371 ZNF777Q9ULD5 760 aaPredicted RBP11.31□□□□□ -0.6
AP4S1-211ENST00000616371 PRDM2Q13029 1718 aa11.3□□□□□ -0.6
AP4S1-211ENST00000616371 URB2Q14146 1524 aaKnown RBP11.29□□□□□ -0.6
AP4S1-211ENST00000616371 AQRO60306 1485 aaKnown RBP eCLIP11.28□□□□□ -0.6
AP4S1-211ENST00000616371 MRC2Q9UBG0 1479 aa11.28□□□□□ -0.6
AP4S1-211ENST00000616371 FANCIQ9NVI1 1328 aa11.28□□□□□ -0.6
AP4S1-211ENST00000616371 WDR97A6NE52 1622 aa11.28□□□□□ -0.6
AP4S1-211ENST00000616371 MYT1LQ9UL68 1186 aa11.26□□□□□ -0.61
AP4S1-211ENST00000616371 RRP7BPQ9NSQ0 103 aa11.25□□□□□ -0.61
AP4S1-211ENST00000616371 PPP4R2Q9NY27 417 aa11.24□□□□□ -0.61
AP4S1-211ENST00000616371 MAPKBP1O60336 1514 aa11.24□□□□□ -0.61
AP4S1-211ENST00000616371 CUL7Q14999 1698 aa11.24□□□□□ -0.61
AP4S1-211ENST00000616371 NPM1P06748 294 aaKnown RBP eCLIP11.24□□□□□ -0.61
AP4S1-211ENST00000616371 NBR1Q14596 966 aa11.24□□□□□ -0.61
AP4S1-211ENST00000616371 LRRC9Q6ZRR7 1453 aa11.24□□□□□ -0.61
AP4S1-211ENST00000616371 EFCAB5A4FU69 1503 aa11.23□□□□□ -0.61
AP4S1-211ENST00000616371 FAM9BQ8IZU0 186 aa11.23□□□□□ -0.61
AP4S1-211ENST00000616371 DEKP35659 375 aaKnown RBP11.23□□□□□ -0.61
AP4S1-211ENST00000616371 GRIN2BQ13224 1484 aa11.22□□□□□ -0.61
AP4S1-211ENST00000616371 B4GALNT3Q6L9W6 998 aa11.21□□□□□ -0.61
AP4S1-211ENST00000616371 CASKIN1Q8WXD9 1431 aa11.21□□□□□ -0.61
AP4S1-211ENST00000616371 CNGB1Q14028 1251 aaPredicted RBP11.21□□□□□ -0.62
AP4S1-211ENST00000616371 PHLDB1Q86UU1 1377 aa11.21□□□□□ -0.62
AP4S1-211ENST00000616371 FYCO1Q9BQS8 1478 aa11.21□□□□□ -0.62
AP4S1-211ENST00000616371 TIAM1Q13009 1591 aa11.2□□□□□ -0.62
AP4S1-211ENST00000616371 IFT140Q96RY7 1462 aa11.2□□□□□ -0.62
AP4S1-211ENST00000616371 PLEKHD1A6NEE1 506 aa11.19□□□□□ -0.62
AP4S1-211ENST00000616371 RTL5Q5HYW3 569 aaPredicted RBP11.19□□□□□ -0.62
AP4S1-211ENST00000616371 CARMIL2Q6F5E8 1435 aa11.18□□□□□ -0.62
AP4S1-211ENST00000616371 ERICH6BQ5W0A0 696 aa11.18□□□□□ -0.62
AP4S1-211ENST00000616371 CFDP1Q9UEE9 299 aaPredicted RBP11.18□□□□□ -0.62
AP4S1-211ENST00000616371 MRS2Q9HD23 443 aa11.18□□□□□ -0.62
AP4S1-211ENST00000616371 POLR3GLQ9BT43 218 aa11.16□□□□□ -0.62
AP4S1-211ENST00000616371 NOP58Q9Y2X3 529 aaKnown RBP11.16□□□□□ -0.62
AP4S1-211ENST00000616371 PCF11O94913 1555 aaKnown RBP11.16□□□□□ -0.62
AP4S1-211ENST00000616371 ANP32AP39687 249 aaKnown RBP11.15□□□□□ -0.62
AP4S1-211ENST00000616371 KIF21AQ7Z4S6 1674 aa11.15□□□□□ -0.63
AP4S1-211ENST00000616371 EIF4G2P78344 907 aaKnown RBP eCLIP11.14□□□□□ -0.63
AP4S1-211ENST00000616371 ZNF326Q5BKZ1 582 aaKnown RBP11.14□□□□□ -0.63
AP4S1-211ENST00000616371 HSPA5P11021 654 aaKnown RBP11.14□□□□□ -0.63
AP4S1-211ENST00000616371 JPH4Q96JJ6 628 aa11.14□□□□□ -0.63
AP4S1-211ENST00000616371 TSPY4P0CV99 314 aa11.13□□□□□ -0.63
AP4S1-211ENST00000616371 TSPY10P0CW01 314 aa11.13□□□□□ -0.63
AP4S1-211ENST00000616371 CCDC18Q5T9S5 1454 aa11.13□□□□□ -0.63
AP4S1-211ENST00000616371 FGD6Q6ZV73 1430 aa11.13□□□□□ -0.63
AP4S1-211ENST00000616371 SNAPC4Q5SXM2 1469 aa11.12□□□□□ -0.63
AP4S1-211ENST00000616371 MAP3K1Q13233 1512 aa11.11□□□□□ -0.63
AP4S1-211ENST00000616371 CCDC136Q96JN2 1154 aa11.11□□□□□ -0.63
AP4S1-211ENST00000616371 SLC4A1APQ9BWU0 796 aaKnown RBP11.11□□□□□ -0.63
AP4S1-211ENST00000616371 ZBTB47Q9UFB7 747 aaPredicted RBP11.1□□□□□ -0.63
AP4S1-211ENST00000616371 MYOM3Q5VTT5 1437 aa11.1□□□□□ -0.63
AP4S1-211ENST00000616371 NCOA2Q15596 1464 aa11.1□□□□□ -0.63
AP4S1-211ENST00000616371 ZNF608Q9ULD9 1512 aaPredicted RBP11.1□□□□□ -0.63
AP4S1-211ENST00000616371 IQGAP2Q13576 1575 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms