RNA–Protein interactions for RNA: ENST00000616371.4

AP4S1-211, Transcript of adaptor related protein complex 4 subunit sigma 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AP4S1, Length 4,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1-211ENST00000616371 NISCHQ9Y2I1 1504 aa16.01■□□□□ 0.15
AP4S1-211ENST00000616371 DCAF8L2P0C7V8 631 aa14.2□□□□□ -0.14
AP4S1-211ENST00000616371 SHROOM4Q9ULL8 1493 aa13.96□□□□□ -0.17
AP4S1-211ENST00000616371 SUPT5HO00267 1087 aaKnown RBP13.77□□□□□ -0.21
AP4S1-211ENST00000616371 CCDC180Q9P1Z9 1646 aa13.59□□□□□ -0.23
AP4S1-211ENST00000616371 HRCP23327 699 aa13.57□□□□□ -0.24
AP4S1-211ENST00000616371 PCGF6Q9BYE7 350 aa13.49□□□□□ -0.25
AP4S1-211ENST00000616371 ZCCHC6Q5VYS8 1495 aaKnown RBP13.43□□□□□ -0.26
AP4S1-211ENST00000616371 PPARGC1BQ86YN6 1023 aaKnown RBP13.33□□□□□ -0.28
AP4S1-211ENST00000616371 CHIC1Q5VXU3 224 aa13.32□□□□□ -0.28
AP4S1-211ENST00000616371 ABCC9O60706 1549 aa13.21□□□□□ -0.3
AP4S1-211ENST00000616371 MYO15BQ96JP2 1530 aa13.19□□□□□ -0.3
AP4S1-211ENST00000616371 LOC105371045A0A1W2PR82 267 aa13.08□□□□□ -0.32
AP4S1-211ENST00000616371 PELP1Q8IZL8 1130 aaKnown RBP13.03□□□□□ -0.32
AP4S1-211ENST00000616371 TRIM26Q12899 539 aaPredicted RBP13.02□□□□□ -0.33
AP4S1-211ENST00000616371 DCAF1Q9Y4B6 1507 aa13.01□□□□□ -0.33
AP4S1-211ENST00000616371 SCRIBQ14160 1630 aa12.95□□□□□ -0.34
AP4S1-211ENST00000616371 ZEB1P37275 1124 aaPredicted RBP12.93□□□□□ -0.34
AP4S1-211ENST00000616371 TRIM41Q8WV44 630 aa12.8□□□□□ -0.36
AP4S1-211ENST00000616371 NACADO15069 1562 aa12.8□□□□□ -0.36
AP4S1-211ENST00000616371 EHMT2Q96KQ7 1210 aa12.79□□□□□ -0.36
AP4S1-211ENST00000616371 FAM9AQ8IZU1 332 aaPredicted RBP12.78□□□□□ -0.36
AP4S1-211ENST00000616371 SCAF1Q9H7N4 1312 aaKnown RBP12.75□□□□□ -0.37
AP4S1-211ENST00000616371 RB1CC1Q8TDY2 1594 aa12.73□□□□□ -0.37
AP4S1-211ENST00000616371 PABPN1Q86U42 306 aaKnown RBP eCLIP12.71□□□□□ -0.38
AP4S1-211ENST00000616371 RSF1Q96T23 1441 aaPredicted RBP12.63□□□□□ -0.39
AP4S1-211ENST00000616371 CCER1Q8TC90 406 aaPredicted RBP12.59□□□□□ -0.39
AP4S1-211ENST00000616371 CENPBP07199 599 aaPredicted RBP12.56□□□□□ -0.4
AP4S1-211ENST00000616371 ACIN1Q9UKV3 1341 aaKnown RBP12.54□□□□□ -0.4
AP4S1-211ENST00000616371 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.52□□□□□ -0.4
AP4S1-211ENST00000616371 MYT1Q01538 1121 aa12.51□□□□□ -0.41
AP4S1-211ENST00000616371 CECR2Q9BXF3 1484 aa12.51□□□□□ -0.41
AP4S1-211ENST00000616371 NEUROD1Q13562 356 aa12.49□□□□□ -0.41
AP4S1-211ENST00000616371 GTF3C3Q9Y5Q9 886 aa12.49□□□□□ -0.41
AP4S1-211ENST00000616371 DIEXFQ68CQ4 756 aaKnown RBP12.46□□□□□ -0.41
AP4S1-211ENST00000616371 TTBK1Q5TCY1 1321 aaPredicted RBP12.45□□□□□ -0.42
AP4S1-211ENST00000616371 BAZ1AQ9NRL2 1556 aaPredicted RBP12.42□□□□□ -0.42
AP4S1-211ENST00000616371 MROH2BQ7Z745 1585 aa12.42□□□□□ -0.42
AP4S1-211ENST00000616371 UBTFP17480 764 aaKnown RBP12.37□□□□□ -0.43
AP4S1-211ENST00000616371 YTHDC1Q96MU7 727 aaKnown RBP12.36□□□□□ -0.43
AP4S1-211ENST00000616371 WIZO95785 1651 aa12.31□□□□□ -0.44
AP4S1-211ENST00000616371 RANGAP1P46060 587 aaPredicted RBP12.27□□□□□ -0.44
AP4S1-211ENST00000616371 APLP2Q06481 763 aa12.27□□□□□ -0.45
AP4S1-211ENST00000616371 ZNF316A6NFI3 1004 aaPredicted RBP12.22□□□□□ -0.45
AP4S1-211ENST00000616371 SMARCA4P51532 1647 aa12.21□□□□□ -0.45
AP4S1-211ENST00000616371 BAZ1BQ9UIG0 1483 aaKnown RBP12.19□□□□□ -0.46
AP4S1-211ENST00000616371 TOP2AP11388 1531 aaKnown RBP12.19□□□□□ -0.46
AP4S1-211ENST00000616371 CCDC88BA6NC98 1476 aa12.17□□□□□ -0.46
AP4S1-211ENST00000616371 CSRNP3Q8WYN3 585 aa12.14□□□□□ -0.47
AP4S1-211ENST00000616371 HNRNPUL2Q1KMD3 747 aaKnown RBP12.11□□□□□ -0.47
AP4S1-211ENST00000616371 MIER1Q8N108 512 aa12.1□□□□□ -0.47
AP4S1-211ENST00000616371 SMARCA2P51531 1590 aa12.08□□□□□ -0.48
AP4S1-211ENST00000616371 WRNQ14191 1432 aaPredicted RBP eCLIP12.07□□□□□ -0.48
AP4S1-211ENST00000616371 ABCC8Q09428 1581 aa12.07□□□□□ -0.48
AP4S1-211ENST00000616371 ATAD2BQ9ULI0 1458 aa12.05□□□□□ -0.48
AP4S1-211ENST00000616371 UNC13AQ9UPW8 1703 aa12.04□□□□□ -0.48
AP4S1-211ENST00000616371 BICRAQ9NZM4 1560 aa12.02□□□□□ -0.48
AP4S1-211ENST00000616371 CEP162Q5TB80 1403 aa12.01□□□□□ -0.49
AP4S1-211ENST00000616371 EEA1Q15075 1411 aa12.01□□□□□ -0.49
AP4S1-211ENST00000616371 AEBP2Q6ZN18 517 aaPredicted RBP12□□□□□ -0.49
AP4S1-211ENST00000616371 ATP1B4Q9UN42 357 aaPredicted RBP11.97□□□□□ -0.49
AP4S1-211ENST00000616371 SOGA1O94964 1423 aa11.96□□□□□ -0.49
AP4S1-211ENST00000616371 TNIKQ9UKE5 1360 aa11.93□□□□□ -0.5
AP4S1-211ENST00000616371 GOLGA3Q08378 1498 aa11.92□□□□□ -0.5
AP4S1-211ENST00000616371 EIF4G1Q04637 1599 aaKnown RBP11.88□□□□□ -0.51
AP4S1-211ENST00000616371 CEP164Q9UPV0 1460 aa11.87□□□□□ -0.51
AP4S1-211ENST00000616371 CLSPNQ9HAW4 1339 aa11.85□□□□□ -0.51
AP4S1-211ENST00000616371 SUPT16HQ9Y5B9 1047 aaKnown RBP11.85□□□□□ -0.51
AP4S1-211ENST00000616371 CLIP1P30622 1438 aa11.84□□□□□ -0.51
AP4S1-211ENST00000616371 NCAPD3P42695 1498 aa11.83□□□□□ -0.52
AP4S1-211ENST00000616371 PEG3Q9GZU2 1588 aa11.81□□□□□ -0.52
AP4S1-211ENST00000616371 KIF27Q86VH2 1401 aa11.81□□□□□ -0.52
AP4S1-211ENST00000616371 RUSC2Q8N2Y8 1516 aa11.8□□□□□ -0.52
AP4S1-211ENST00000616371 BCANQ96GW7 911 aa11.79□□□□□ -0.52
AP4S1-211ENST00000616371 ITGAEP38570 1179 aa11.78□□□□□ -0.52
AP4S1-211ENST00000616371 ANP32EQ9BTT0 268 aa11.77□□□□□ -0.53
AP4S1-211ENST00000616371 HMGXB3Q12766 1538 aa11.75□□□□□ -0.53
AP4S1-211ENST00000616371 CADPSQ9ULU8 1353 aa11.75□□□□□ -0.53
AP4S1-211ENST00000616371 TSHZ2Q9NRE2 1034 aa11.75□□□□□ -0.53
AP4S1-211ENST00000616371 P3H3Q8IVL6 736 aa11.73□□□□□ -0.53
AP4S1-211ENST00000616371 SYNJ1O43426 1573 aa11.73□□□□□ -0.53
AP4S1-211ENST00000616371 NEFLP07196 543 aa11.72□□□□□ -0.53
AP4S1-211ENST00000616371 CUX2O14529 1486 aa11.71□□□□□ -0.53
AP4S1-211ENST00000616371 FKBP8Q14318 412 aa11.68□□□□□ -0.54
AP4S1-211ENST00000616371 RAPGEF2Q9Y4G8 1499 aa11.68□□□□□ -0.54
AP4S1-211ENST00000616371 VPS8Q8N3P4 1428 aa11.67□□□□□ -0.54
AP4S1-211ENST00000616371 CFTRP13569 1480 aa11.67□□□□□ -0.54
AP4S1-211ENST00000616371 CC2D2AQ9P2K1 1620 aa11.65□□□□□ -0.54
AP4S1-211ENST00000616371 FAM50AQ14320 339 aaKnown RBP11.65□□□□□ -0.55
AP4S1-211ENST00000616371 BCL11AQ9H165 835 aa11.65□□□□□ -0.55
AP4S1-211ENST00000616371 CARMIL1Q5VZK9 1371 aa11.63□□□□□ -0.55
AP4S1-211ENST00000616371 FANCD2Q9BXW9 1451 aa11.63□□□□□ -0.55
AP4S1-211ENST00000616371 TOP2BQ02880 1626 aa11.62□□□□□ -0.55
AP4S1-211ENST00000616371 DHX57Q6P158 1386 aaKnown RBP11.62□□□□□ -0.55
AP4S1-211ENST00000616371 KCNH8Q96L42 1107 aa11.61□□□□□ -0.55
AP4S1-211ENST00000616371 DDX10Q13206 875 aaKnown RBP11.6□□□□□ -0.55
AP4S1-211ENST00000616371 PDS5BQ9NTI5 1447 aa11.59□□□□□ -0.55
AP4S1-211ENST00000616371 ERICH6Q7L0X2 663 aa11.59□□□□□ -0.55
AP4S1-211ENST00000616371 KIF21BO75037 1637 aa11.59□□□□□ -0.55
AP4S1-211ENST00000616371 CUX1P39880 1505 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms