RNA–Protein interactions for RNA: ENST00000616051.1

RCC1L-204, Transcript of RCC1 like, humanhuman

TSL 2

Gene RCC1L, Length 1,610 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1L-204ENST00000616051 KIAA0586Q9BVV6 1533 aa45.26■■■■■ 4.84
RCC1L-204ENST00000616051 CTTNBP2Q8WZ74 1663 aa45.2■■■■■ 4.83
RCC1L-204ENST00000616051 UBTFP17480 764 aaKnown RBP45.17■■■■■ 4.82
RCC1L-204ENST00000616051 IQGAP2Q13576 1575 aa45.12■■■■■ 4.81
RCC1L-204ENST00000616051 LOC105371045A0A1W2PR82 267 aa45.08■■■■■ 4.81
RCC1L-204ENST00000616051 JPH4Q96JJ6 628 aa45.08■■■■■ 4.81
RCC1L-204ENST00000616051 SHROOM2Q13796 1616 aa45.04■■■■■ 4.8
RCC1L-204ENST00000616051 DNAJC5Q9H3Z4 198 aa44.95■■■■■ 4.79
RCC1L-204ENST00000616051 TNIKQ9UKE5 1360 aa44.92■■■■■ 4.78
RCC1L-204ENST00000616051 UGGT2Q9NYU1 1516 aa44.9■■■■■ 4.78
RCC1L-204ENST00000616051 PRG4Q92954 1404 aaPredicted RBP44.89■■■■■ 4.78
RCC1L-204ENST00000616051 ERCC6L2Q5T890 1561 aa44.82■■■■■ 4.77
RCC1L-204ENST00000616051 ARHGEF11O15085 1522 aa44.8■■■■■ 4.76
RCC1L-204ENST00000616051 RANGAP1P46060 587 aaPredicted RBP44.8■■■■■ 4.76
RCC1L-204ENST00000616051 DISP1Q96F81 1524 aa44.76■■■■■ 4.76
RCC1L-204ENST00000616051 RIMBP3CA6NJZ7 1639 aa44.74■■■■■ 4.75
RCC1L-204ENST00000616051 RIMBP3BA6NNM3 1639 aa44.74■■■■■ 4.75
RCC1L-204ENST00000616051 RIMBP3Q9UFD9 1639 aa44.74■■■■■ 4.75
RCC1L-204ENST00000616051 CARMIL2Q6F5E8 1435 aa44.73■■■■■ 4.75
RCC1L-204ENST00000616051 KIAA0556O60303 1618 aa44.68■■■■■ 4.74
RCC1L-204ENST00000616051 SAMD9Q5K651 1589 aa44.66■■■■■ 4.74
RCC1L-204ENST00000616051 P3H3Q8IVL6 736 aa44.6■■■■■ 4.73
RCC1L-204ENST00000616051 EFCAB5A4FU69 1503 aa44.59■■■■■ 4.73
RCC1L-204ENST00000616051 ARHGAP35Q9NRY4 1499 aa44.55■■■■■ 4.72
RCC1L-204ENST00000616051 CLIP1P30622 1438 aa44.54■■■■■ 4.72
RCC1L-204ENST00000616051 CEP162Q5TB80 1403 aa44.54■■■■■ 4.72
RCC1L-204ENST00000616051 ARAP1Q96P48 1450 aa44.51■■■■■ 4.72
RCC1L-204ENST00000616051 PTPRGP23470 1445 aa44.46■■■■■ 4.71
RCC1L-204ENST00000616051 FHOD3Q2V2M9 1422 aa44.45■■■■■ 4.71
RCC1L-204ENST00000616051 TTBK1Q5TCY1 1321 aaPredicted RBP44.45■■■■■ 4.71
RCC1L-204ENST00000616051 CYB5RLQ6IPT4 315 aa44.39■■■■■ 4.7
RCC1L-204ENST00000616051 PLB1Q6P1J6 1458 aa44.19■■■■■ 4.66
RCC1L-204ENST00000616051 FMN1Q68DA7 1419 aa44.19■■■■■ 4.66
RCC1L-204ENST00000616051 UACAQ9BZF9 1416 aa44.18■■■■■ 4.66
RCC1L-204ENST00000616051 ABCA8O94911 1581 aa44.15■■■■■ 4.66
RCC1L-204ENST00000616051 ADCY10Q96PN6 1610 aa44.1■■■■■ 4.65
RCC1L-204ENST00000616051 UHRF1BP1LA0JNW5 1464 aa44.08■■■■■ 4.65
RCC1L-204ENST00000616051 RAPGEF6Q8TEU7 1601 aa44.07■■■■■ 4.65
RCC1L-204ENST00000616051 ABCC2Q92887 1545 aa44.07■■■■■ 4.65
RCC1L-204ENST00000616051 VPS8Q8N3P4 1428 aa43.94■■■■■ 4.62
RCC1L-204ENST00000616051 CASKIN1Q8WXD9 1431 aa43.94■■■■■ 4.62
RCC1L-204ENST00000616051 PCF11O94913 1555 aaKnown RBP43.93■■■■■ 4.62
RCC1L-204ENST00000616051 NUP153P49790 1475 aaKnown RBP43.92■■■■■ 4.62
RCC1L-204ENST00000616051 ATP1B4Q9UN42 357 aaPredicted RBP43.9■■■■■ 4.62
RCC1L-204ENST00000616051 KDM5BQ9UGL1 1544 aa43.87■■■■■ 4.61
RCC1L-204ENST00000616051 HECW1Q76N89 1606 aa43.87■■■■■ 4.61
RCC1L-204ENST00000616051 FYCO1Q9BQS8 1478 aa43.87■■■■■ 4.61
RCC1L-204ENST00000616051 ARID3CA6NKF2 412 aa43.85■■■■■ 4.61
RCC1L-204ENST00000616051 NPM1P06748 294 aaKnown RBP eCLIP43.85■■■■■ 4.61
RCC1L-204ENST00000616051 ATP10BO94823 1461 aa43.82■■■■■ 4.61
RCC1L-204ENST00000616051 ZCCHC11Q5TAX3 1644 aaKnown RBP43.8■■■■■ 4.6
RCC1L-204ENST00000616051 LRRIQ1Q96JM4 1722 aa43.77■■■■■ 4.6
RCC1L-204ENST00000616051 EPRSP07814 1512 aaKnown RBP43.75■■■■■ 4.59
RCC1L-204ENST00000616051 CDK13Q14004 1512 aaKnown RBP43.71■■■■■ 4.59
RCC1L-204ENST00000616051 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP43.7■■■■■ 4.59
RCC1L-204ENST00000616051 HNRNPUL2Q1KMD3 747 aaKnown RBP43.7■■■■■ 4.59
RCC1L-204ENST00000616051 CCDC18Q5T9S5 1454 aa43.65■■■■■ 4.58
RCC1L-204ENST00000616051 MAPKBP1O60336 1514 aa43.62■■■■■ 4.57
RCC1L-204ENST00000616051 ASXL2Q76L83 1435 aa43.59■■■■■ 4.57
RCC1L-204ENST00000616051 PLEKHD1A6NEE1 506 aa43.51■■■■■ 4.56
RCC1L-204ENST00000616051 CDK11AQ9UQ88 783 aaPredicted RBP43.5■■■■■ 4.55
RCC1L-204ENST00000616051 WDR7Q9Y4E6 1490 aa43.48■■■■■ 4.55
RCC1L-204ENST00000616051 TIAM1Q13009 1591 aa43.46■■■■■ 4.55
RCC1L-204ENST00000616051 CFAP43Q8NDM7 1665 aa43.46■■■■■ 4.55
RCC1L-204ENST00000616051 MAP3K1Q13233 1512 aa43.45■■■■■ 4.55
RCC1L-204ENST00000616051 APLP2Q06481 763 aa43.44■■■■■ 4.54
RCC1L-204ENST00000616051 MAGI3Q5TCQ9 1506 aa43.41■■■■■ 4.54
RCC1L-204ENST00000616051 KCNH8Q96L42 1107 aa43.38■■■■■ 4.54
RCC1L-204ENST00000616051 TROQ12816 1431 aaPredicted RBP43.36■■■■■ 4.53
RCC1L-204ENST00000616051 ABCC10Q5T3U5 1492 aa43.34■■■■■ 4.53
RCC1L-204ENST00000616051 MTUS2Q5JR59 1369 aa43.31■■■■■ 4.52
RCC1L-204ENST00000616051 KANK4Q5T7N3 995 aaPredicted RBP43.3■■■■■ 4.52
RCC1L-204ENST00000616051 DIP2BQ9P265 1576 aa43.29■■■■■ 4.52
RCC1L-204ENST00000616051 LRRC9Q6ZRR7 1453 aa43.28■■■■■ 4.52
RCC1L-204ENST00000616051 FAM69CQ0P6D2 419 aa43.25■■■■■ 4.51
RCC1L-204ENST00000616051 KIF13AQ9H1H9 1805 aa43.24■■■■■ 4.51
RCC1L-204ENST00000616051 EHBP1L1Q8N3D4 1523 aa43.24■■■■■ 4.51
RCC1L-204ENST00000616051 GLI2P10070 1586 aa43.21■■■■■ 4.51
RCC1L-204ENST00000616051 KIF14Q15058 1648 aa43.2■■■■■ 4.51
RCC1L-204ENST00000616051 TRHP20396 242 aaPredicted RBP43.19■■■■■ 4.51
RCC1L-204ENST00000616051 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP43.14■■■■■ 4.51e-8■■■■□ 21.8
RCC1L-204ENST00000616051 ABCA9Q8IUA7 1624 aa43.12■■■■■ 4.49
RCC1L-204ENST00000616051 SUPT6HQ7KZ85 1726 aaKnown RBP43.08■■■■■ 4.49
RCC1L-204ENST00000616051 TTC37Q6PGP7 1564 aa43.08■■■■■ 4.49
RCC1L-204ENST00000616051 MAP3K4Q9Y6R4 1608 aa43.06■■■■■ 4.48
RCC1L-204ENST00000616051 PPARGC1BQ86YN6 1023 aaKnown RBP43.04■■■■■ 4.48
RCC1L-204ENST00000616051 CD109Q6YHK3 1445 aa43.02■■■■■ 4.48
RCC1L-204ENST00000616051 NCOA2Q15596 1464 aa43.01■■■■■ 4.48
RCC1L-204ENST00000616051 TSPOAP1O95153 1857 aa42.96■■■■■ 4.47
RCC1L-204ENST00000616051 MYO5CQ9NQX4 1742 aa42.92■■■■■ 4.46
RCC1L-204ENST00000616051 CCNB3Q8WWL7 1395 aa42.91■■■■■ 4.46
RCC1L-204ENST00000616051 CDC42BPAQ5VT25 1732 aa42.9■■■■■ 4.46
RCC1L-204ENST00000616051 PLCH2O75038 1416 aa42.89■■■■■ 4.46
RCC1L-204ENST00000616051 GPATCH8Q9UKJ3 1502 aaKnown RBP42.89■■■■■ 4.46
RCC1L-204ENST00000616051 PPRC1Q5VV67 1664 aaKnown RBP42.88■■■■■ 4.46
RCC1L-204ENST00000616051 CDC42BPBQ9Y5S2 1711 aa42.84■■■■■ 4.45
RCC1L-204ENST00000616051 PREX2Q70Z35 1606 aa42.83■■■■■ 4.45
RCC1L-204ENST00000616051 ARAP3Q8WWN8 1544 aa42.8■■■■■ 4.44
RCC1L-204ENST00000616051 PHLDB1Q86UU1 1377 aa42.8■■■■■ 4.44
RCC1L-204ENST00000616051 ITSN2Q9NZM3 1697 aa42.78■■■■■ 4.44
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms