RNA–Protein interactions for RNA: ENST00000613943.4

SMARCD2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5 BASIC

Gene SMARCD2, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-212ENST00000613943 DHX57Q6P158 1386 aaKnown RBP29.36■■■□□ 2.29
SMARCD2-212ENST00000613943 KIF21AQ7Z4S6 1674 aa29.36■■■□□ 2.29
SMARCD2-212ENST00000613943 PCF11O94913 1555 aaKnown RBP29.35■■■□□ 2.29
SMARCD2-212ENST00000613943 WDR97A6NE52 1622 aa29.34■■■□□ 2.29
SMARCD2-212ENST00000613943 CUL7Q14999 1698 aa29.32■■■□□ 2.28
SMARCD2-212ENST00000613943 LRRC9Q6ZRR7 1453 aa29.32■■■□□ 2.28
SMARCD2-212ENST00000613943 FHAD1B1AJZ9 1412 aa29.32■■■□□ 2.28
SMARCD2-212ENST00000613943 GAPVD1Q14C86 1478 aa29.3■■■□□ 2.28
SMARCD2-212ENST00000613943 PHLDB1Q86UU1 1377 aa29.29■■■□□ 2.28
SMARCD2-212ENST00000613943 ABCA5Q8WWZ7 1642 aa29.27■■■□□ 2.28
SMARCD2-212ENST00000613943 MAP3K1Q13233 1512 aa29.25■■■□□ 2.27
SMARCD2-212ENST00000613943 CTTNBP2Q8WZ74 1663 aa29.22■■■□□ 2.27
SMARCD2-212ENST00000613943 FAM50AQ14320 339 aaKnown RBP29.21■■■□□ 2.27
SMARCD2-212ENST00000613943 EFCAB5A4FU69 1503 aa29.18■■■□□ 2.26
SMARCD2-212ENST00000613943 CFAP43Q8NDM7 1665 aa29.16■■■□□ 2.26
SMARCD2-212ENST00000613943 SCAF1Q9H7N4 1312 aaKnown RBP29.16■■■□□ 2.26
SMARCD2-212ENST00000613943 CASKIN1Q8WXD9 1431 aa29.14■■■□□ 2.25
SMARCD2-212ENST00000613943 FYCO1Q9BQS8 1478 aa29.13■■■□□ 2.25
SMARCD2-212ENST00000613943 RAB3GAP2Q9H2M9 1393 aa29.13■■■□□ 2.25
SMARCD2-212ENST00000613943 TARBP1Q13395 1621 aaKnown RBP29.13■■■□□ 2.25
SMARCD2-212ENST00000613943 CLSPNQ9HAW4 1339 aa29.11■■■□□ 2.25
SMARCD2-212ENST00000613943 AQRO60306 1485 aaKnown RBP eCLIP29.1■■■□□ 2.253e-8■■■■□ 23.4
SMARCD2-212ENST00000613943 NEUROD1Q13562 356 aa29.06■■■□□ 2.24
SMARCD2-212ENST00000613943 FMN1Q68DA7 1419 aa29.06■■■□□ 2.24
SMARCD2-212ENST00000613943 SNAPC4Q5SXM2 1469 aa29.05■■■□□ 2.24
SMARCD2-212ENST00000613943 MIER1Q8N108 512 aa29■■■□□ 2.23
SMARCD2-212ENST00000613943 SAMD9Q5K651 1589 aa29■■■□□ 2.23
SMARCD2-212ENST00000613943 MRC2Q9UBG0 1479 aa29■■■□□ 2.23
SMARCD2-212ENST00000613943 SETD5Q9C0A6 1442 aa28.97■■■□□ 2.23
SMARCD2-212ENST00000613943 ACIN1Q9UKV3 1341 aaKnown RBP28.97■■■□□ 2.23
SMARCD2-212ENST00000613943 MTUS2Q5JR59 1369 aa28.95■■■□□ 2.22
SMARCD2-212ENST00000613943 YTHDC1Q96MU7 727 aaKnown RBP28.93■■■□□ 2.22
SMARCD2-212ENST00000613943 PBRM1Q86U86 1689 aa28.93■■■□□ 2.22
SMARCD2-212ENST00000613943 ZNF608Q9ULD9 1512 aaPredicted RBP28.92■■■□□ 2.22
SMARCD2-212ENST00000613943 MAPKBP1O60336 1514 aa28.92■■■□□ 2.22
SMARCD2-212ENST00000613943 LRRIQ1Q96JM4 1722 aa28.91■■■□□ 2.22
SMARCD2-212ENST00000613943 GRIN2BQ13224 1484 aa28.88■■■□□ 2.21
SMARCD2-212ENST00000613943 ARID3CA6NKF2 412 aa28.87■■■□□ 2.21
SMARCD2-212ENST00000613943 FGD6Q6ZV73 1430 aa28.86■■■□□ 2.21
SMARCD2-212ENST00000613943 ADAMTS12P58397 1594 aa28.84■■■□□ 2.21
SMARCD2-212ENST00000613943 SIN3AQ96ST3 1273 aa28.83■■■□□ 2.21
SMARCD2-212ENST00000613943 CENPBP07199 599 aaPredicted RBP28.81■■■□□ 2.2
SMARCD2-212ENST00000613943 NCOA2Q15596 1464 aa28.79■■■□□ 2.2
SMARCD2-212ENST00000613943 IQGAP2Q13576 1575 aa28.78■■■□□ 2.2
SMARCD2-212ENST00000613943 PTPRKQ15262 1439 aa28.76■■■□□ 2.19
SMARCD2-212ENST00000613943 MAGI3Q5TCQ9 1506 aa28.76■■■□□ 2.19
SMARCD2-212ENST00000613943 IFT140Q96RY7 1462 aa28.75■■■□□ 2.19
SMARCD2-212ENST00000613943 WDR62O43379 1518 aa28.75■■■□□ 2.19
SMARCD2-212ENST00000613943 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.73■■■□□ 2.199e-6■□□□□ 9.6
SMARCD2-212ENST00000613943 ERCC6Q03468 1493 aa28.71■■■□□ 2.19
SMARCD2-212ENST00000613943 MYOM3Q5VTT5 1437 aa28.7■■■□□ 2.18
SMARCD2-212ENST00000613943 GTF3C3Q9Y5Q9 886 aa28.68■■■□□ 2.18
SMARCD2-212ENST00000613943 THOC2Q8NI27 1593 aaKnown RBP28.68■■■□□ 2.18
SMARCD2-212ENST00000613943 CDK13Q14004 1512 aaKnown RBP28.67■■■□□ 2.18
SMARCD2-212ENST00000613943 EHBP1L1Q8N3D4 1523 aa28.67■■■□□ 2.18
SMARCD2-212ENST00000613943 SUPT6HQ7KZ85 1726 aaKnown RBP28.65■■■□□ 2.18
SMARCD2-212ENST00000613943 EPRSP07814 1512 aaKnown RBP28.62■■■□□ 2.17
SMARCD2-212ENST00000613943 EIF4G3O43432 1585 aaKnown RBP28.62■■■□□ 2.17
SMARCD2-212ENST00000613943 UGGT2Q9NYU1 1516 aa28.61■■■□□ 2.17
SMARCD2-212ENST00000613943 HECW1Q76N89 1606 aa28.6■■■□□ 2.17
SMARCD2-212ENST00000613943 CCDC18Q5T9S5 1454 aa28.6■■■□□ 2.17
SMARCD2-212ENST00000613943 CHIC2Q9UKJ5 165 aa28.59■■■□□ 2.17
SMARCD2-212ENST00000613943 FBLN2P98095 1184 aa28.57■■■□□ 2.16
SMARCD2-212ENST00000613943 HFM1A2PYH4 1435 aa28.57■■■□□ 2.16
SMARCD2-212ENST00000613943 PTPN23Q9H3S7 1636 aa28.56■■■□□ 2.16
SMARCD2-212ENST00000613943 ARHGEF11O15085 1522 aa28.55■■■□□ 2.16
SMARCD2-212ENST00000613943 GRIN2AQ12879 1464 aa28.55■■■□□ 2.16
SMARCD2-212ENST00000613943 RRP7BPQ9NSQ0 103 aa28.55■■■□□ 2.16
SMARCD2-212ENST00000613943 DISP1Q96F81 1524 aa28.54■■■□□ 2.16
SMARCD2-212ENST00000613943 KIAA0586Q9BVV6 1533 aa28.54■■■□□ 2.16
SMARCD2-212ENST00000613943 NAIPQ13075 1403 aa28.53■■■□□ 2.16
SMARCD2-212ENST00000613943 CHMP7Q8WUX9 453 aaPredicted RBP28.51■■■□□ 2.15
SMARCD2-212ENST00000613943 KIAA0556O60303 1618 aa28.48■■■□□ 2.15
SMARCD2-212ENST00000613943 HIRIP3Q9BW71 556 aaPredicted RBP28.48■■■□□ 2.15
SMARCD2-212ENST00000613943 UACAQ9BZF9 1416 aa28.44■■■□□ 2.14
SMARCD2-212ENST00000613943 NUP153P49790 1475 aaKnown RBP28.41■■■□□ 2.14
SMARCD2-212ENST00000613943 PPP1R15AO75807 674 aaPredicted RBP28.4■■■□□ 2.14
SMARCD2-212ENST00000613943 TCOF1Q13428 1488 aaKnown RBP28.4■■■□□ 2.14
SMARCD2-212ENST00000613943 CEP170Q5SW79 1584 aa28.39■■■□□ 2.14
SMARCD2-212ENST00000613943 MAGI1Q96QZ7 1491 aaPredicted RBP28.37■■■□□ 2.13
SMARCD2-212ENST00000613943 ZNF644Q9H582 1327 aaPredicted RBP28.37■■■□□ 2.13
SMARCD2-212ENST00000613943 TONSLQ96HA7 1378 aa28.36■■■□□ 2.13
SMARCD2-212ENST00000613943 SYNJ2O15056 1496 aa28.36■■■□□ 2.13
SMARCD2-212ENST00000613943 TRIM52Q96A61 297 aa28.34■■■□□ 2.13
SMARCD2-212ENST00000613943 TIMELESSQ9UNS1 1208 aa28.34■■■□□ 2.13
SMARCD2-212ENST00000613943 KDM6BO15054 1643 aa28.33■■■□□ 2.13
SMARCD2-212ENST00000613943 DDX10Q13206 875 aaKnown RBP28.33■■■□□ 2.13
SMARCD2-212ENST00000613943 PLB1Q6P1J6 1458 aa28.33■■■□□ 2.13
SMARCD2-212ENST00000613943 RAPGEF6Q8TEU7 1601 aa28.32■■■□□ 2.12
SMARCD2-212ENST00000613943 MIA2Q96PC5 1412 aa28.31■■■□□ 2.12
SMARCD2-212ENST00000613943 KCNH8Q96L42 1107 aa28.3■■■□□ 2.12
SMARCD2-212ENST00000613943 PRG4Q92954 1404 aaPredicted RBP28.29■■■□□ 2.12
SMARCD2-212ENST00000613943 JPH4Q96JJ6 628 aa28.28■■■□□ 2.12
SMARCD2-212ENST00000613943 FOXD1Q16676 465 aa28.25■■■□□ 2.11
SMARCD2-212ENST00000613943 DENND4BO75064 1496 aaPredicted RBP28.25■■■□□ 2.11
SMARCD2-212ENST00000613943 CDK11AQ9UQ88 783 aaPredicted RBP28.23■■■□□ 2.11
SMARCD2-212ENST00000613943 GCC2Q8IWJ2 1684 aa28.21■■■□□ 2.11
SMARCD2-212ENST00000613943 NUP160Q12769 1436 aa28.2■■■□□ 2.11
SMARCD2-212ENST00000613943 DAPK1P53355 1430 aa28.2■■■□□ 2.1
SMARCD2-212ENST00000613943 ABCC5O15440 1437 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms