RNA–Protein interactions for RNA: ENST00000613296.4

ALMS1-206, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,925 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-206ENST00000613296 FAM9BQ8IZU0 186 aa11.02□□□□□ -0.64
ALMS1-206ENST00000613296 NOC3LQ8WTT2 800 aaKnown RBP11.02□□□□□ -0.64
ALMS1-206ENST00000613296 TNNT3P45378 269 aaPredicted RBP11.02□□□□□ -0.65
ALMS1-206ENST00000613296 STAG3Q9UJ98 1225 aa11.02□□□□□ -0.65
ALMS1-206ENST00000613296 CALRP27797 417 aaKnown RBP11.01□□□□□ -0.65
ALMS1-206ENST00000613296 SALL2Q9Y467 1007 aaPredicted RBP11.01□□□□□ -0.65
ALMS1-206ENST00000613296 PLCB2Q00722 1185 aa11.01□□□□□ -0.65
ALMS1-206ENST00000613296 L1TD1Q5T7N2 865 aaKnown RBP10.99□□□□□ -0.65
ALMS1-206ENST00000613296 ZNF777Q9ULD5 760 aaPredicted RBP10.99□□□□□ -0.65
ALMS1-206ENST00000613296 WDR43Q15061 677 aaKnown RBP eCLIP10.98□□□□□ -0.65
ALMS1-206ENST00000613296 PRM3Q9NNZ6 103 aa10.97□□□□□ -0.65
ALMS1-206ENST00000613296 TONSLQ96HA7 1378 aa10.97□□□□□ -0.65
ALMS1-206ENST00000613296 ARID4BQ4LE39 1312 aaPredicted RBP10.95□□□□□ -0.66
ALMS1-206ENST00000613296 C14orf37Q86TY3 774 aa10.95□□□□□ -0.66
ALMS1-206ENST00000613296 MSNP26038 577 aaKnown RBP10.94□□□□□ -0.66
ALMS1-206ENST00000613296 KIAA2012Q0VF49 1180 aa10.94□□□□□ -0.66
ALMS1-206ENST00000613296 PNNQ9H307 717 aaKnown RBP10.94□□□□□ -0.66
ALMS1-206ENST00000613296 ARID3AQ99856 593 aa10.93□□□□□ -0.66
ALMS1-206ENST00000613296 P3H3Q8IVL6 736 aa10.93□□□□□ -0.66
ALMS1-206ENST00000613296 TMC1Q8TDI8 760 aa10.93□□□□□ -0.66
ALMS1-206ENST00000613296 DRC7Q8IY82 874 aa10.92□□□□□ -0.66
ALMS1-206ENST00000613296 IRX6P78412 446 aaPredicted RBP10.92□□□□□ -0.66
ALMS1-206ENST00000613296 LAS1LQ9Y4W2 734 aaKnown RBP10.91□□□□□ -0.66
ALMS1-206ENST00000613296 A0A0U1RQG5 324 aaPredicted RBP10.91□□□□□ -0.66
ALMS1-206ENST00000613296 FGD1P98174 961 aa10.9□□□□□ -0.66
ALMS1-206ENST00000613296 GOLGA6L4A6NEF3 574 aa10.88□□□□□ -0.67
ALMS1-206ENST00000613296 PPM1GO15355 546 aaPredicted RBP10.88□□□□□ -0.67
ALMS1-206ENST00000613296 GOLGA6L1Q8N7Z2 621 aa10.87□□□□□ -0.67
ALMS1-206ENST00000613296 MRS2Q9HD23 443 aa10.87□□□□□ -0.67
ALMS1-206ENST00000613296 NAP1L2Q9ULW6 460 aaPredicted RBP10.86□□□□□ -0.67
ALMS1-206ENST00000613296 FTSJ3Q8IY81 847 aaKnown RBP10.86□□□□□ -0.67
ALMS1-206ENST00000613296 SENP3-EIF4A1A0A087X0R7 540 aa10.85□□□□□ -0.67
ALMS1-206ENST00000613296 SETQ01105 290 aaPredicted RBP10.85□□□□□ -0.67
ALMS1-206ENST00000613296 NPHP1O15259 732 aa10.85□□□□□ -0.67
ALMS1-206ENST00000613296 HSP90AB1P08238 724 aaKnown RBP10.84□□□□□ -0.67
ALMS1-206ENST00000613296 KCNJ4P48050 445 aa10.82□□□□□ -0.68
ALMS1-206ENST00000613296 PDE4CQ08493 712 aa10.82□□□□□ -0.68
ALMS1-206ENST00000613296 PABPN1Q86U42 306 aaKnown RBP eCLIP10.81□□□□□ -0.68
ALMS1-206ENST00000613296 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.81□□□□□ -0.684e-7■■□□□ 12.8
ALMS1-206ENST00000613296 GNL2Q13823 731 aaKnown RBP10.81□□□□□ -0.68
ALMS1-206ENST00000613296 DDX10Q13206 875 aaKnown RBP10.81□□□□□ -0.68
ALMS1-206ENST00000613296 GOLGA2Q08379 1002 aa10.8□□□□□ -0.68
ALMS1-206ENST00000613296 NOP58Q9Y2X3 529 aaKnown RBP10.79□□□□□ -0.68
ALMS1-206ENST00000613296 HAP1P54257 671 aaPredicted RBP10.79□□□□□ -0.68
ALMS1-206ENST00000613296 OS9Q13438 667 aaPredicted RBP10.78□□□□□ -0.68
ALMS1-206ENST00000613296 ISY1Q9ULR0 285 aaKnown RBP10.78□□□□□ -0.68
ALMS1-206ENST00000613296 HSCBQ8IWL3 235 aa10.77□□□□□ -0.69
ALMS1-206ENST00000613296 USP35Q9P2H5 1018 aa10.76□□□□□ -0.69
ALMS1-206ENST00000613296 PATL2C9JE40 543 aaKnown RBP10.75□□□□□ -0.69
ALMS1-206ENST00000613296 RGS3P49796 1198 aa10.75□□□□□ -0.69
ALMS1-206ENST00000613296 ANO8Q9HCE9 1232 aaPredicted RBP10.75□□□□□ -0.69
ALMS1-206ENST00000613296 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.75□□□□□ -0.69
ALMS1-206ENST00000613296 FBXO3Q9UK99 471 aa10.74□□□□□ -0.69
ALMS1-206ENST00000613296 KDM2AQ9Y2K7 1162 aa10.7□□□□□ -0.7
ALMS1-206ENST00000613296 DEKP35659 375 aaKnown RBP10.7□□□□□ -0.7
ALMS1-206ENST00000613296 MCCP23508 829 aa10.69□□□□□ -0.7
ALMS1-206ENST00000613296 CFAP53Q96M91 514 aa10.69□□□□□ -0.7
ALMS1-206ENST00000613296 LMOD2Q6P5Q4 547 aa10.69□□□□□ -0.7
ALMS1-206ENST00000613296 PPP1R15AO75807 674 aaPredicted RBP10.67□□□□□ -0.7
ALMS1-206ENST00000613296 PTMSP20962 102 aa10.67□□□□□ -0.7
ALMS1-206ENST00000613296 CHMP4BQ9H444 224 aaKnown RBP10.67□□□□□ -0.7
ALMS1-206ENST00000613296 SPRYD3Q8NCJ5 442 aa10.66□□□□□ -0.7
ALMS1-206ENST00000613296 SYAP1Q96A49 352 aaPredicted RBP10.66□□□□□ -0.7
ALMS1-206ENST00000613296 TPM4P67936 248 aa10.66□□□□□ -0.7
ALMS1-206ENST00000613296 RRP12Q5JTH9 1297 aaKnown RBP10.65□□□□□ -0.7
ALMS1-206ENST00000613296 CEP89Q96ST8 783 aa10.65□□□□□ -0.7
ALMS1-206ENST00000613296 KRI1Q8N9T8 703 aaKnown RBP10.65□□□□□ -0.7
ALMS1-206ENST00000613296 TPM3P06753 285 aa10.64□□□□□ -0.71
ALMS1-206ENST00000613296 MAPK8IP3Q9UPT6 1336 aa10.64□□□□□ -0.71
ALMS1-206ENST00000613296 GBP4Q96PP9 640 aa10.63□□□□□ -0.71
ALMS1-206ENST00000613296 HTATSF1O43719 755 aaKnown RBP10.63□□□□□ -0.71
ALMS1-206ENST00000613296 TAF7LQ5H9L4 462 aa10.62□□□□□ -0.71
ALMS1-206ENST00000613296 GZF1Q9H116 711 aaPredicted RBP10.62□□□□□ -0.71
ALMS1-206ENST00000613296 CHIC2Q9UKJ5 165 aa10.62□□□□□ -0.71
ALMS1-206ENST00000613296 HSP90AA2PQ14568 343 aaPredicted RBP10.62□□□□□ -0.71
ALMS1-206ENST00000613296 FRAT1Q92837 279 aaPredicted RBP10.62□□□□□ -0.71
ALMS1-206ENST00000613296 CCDC34Q96HJ3 373 aa10.61□□□□□ -0.71
ALMS1-206ENST00000613296 KNSTRNQ9Y448 316 aa10.6□□□□□ -0.71
ALMS1-206ENST00000613296 RASSF8Q8NHQ8 419 aa10.6□□□□□ -0.71
ALMS1-206ENST00000613296 HIRIP3Q9BW71 556 aaPredicted RBP10.59□□□□□ -0.71
ALMS1-206ENST00000613296 HSP90B1P14625 803 aaKnown RBP10.59□□□□□ -0.71
ALMS1-206ENST00000613296 KIAA1211Q6ZU35 1233 aa10.59□□□□□ -0.71
ALMS1-206ENST00000613296 NPM1P06748 294 aaKnown RBP eCLIP10.58□□□□□ -0.72
ALMS1-206ENST00000613296 NEUROD2Q15784 382 aa10.58□□□□□ -0.72
ALMS1-206ENST00000613296 CREBRFQ8IUR6 639 aa10.58□□□□□ -0.72
ALMS1-206ENST00000613296 ZNF771Q7L3S4 317 aaPredicted RBP10.58□□□□□ -0.72
ALMS1-206ENST00000613296 CCDC70Q6NSX1 233 aa10.58□□□□□ -0.72
ALMS1-206ENST00000613296 MS4A1P11836 297 aa10.57□□□□□ -0.72
ALMS1-206ENST00000613296 APPP05067 770 aa10.57□□□□□ -0.72
ALMS1-206ENST00000613296 CCAR2Q8N163 923 aaKnown RBP10.56□□□□□ -0.72
ALMS1-206ENST00000613296 GPS2Q13227 327 aa10.56□□□□□ -0.72
ALMS1-206ENST00000613296 EIF4G2P78344 907 aaKnown RBP eCLIP10.55□□□□□ -0.72
ALMS1-206ENST00000613296 PHF14O94880 888 aa10.55□□□□□ -0.72
ALMS1-206ENST00000613296 GOLGA6L3A6NEY3 463 aa10.55□□□□□ -0.72
ALMS1-206ENST00000613296 MIER1Q8N108 512 aa10.54□□□□□ -0.72
ALMS1-206ENST00000613296 PPP4R2Q9NY27 417 aa10.54□□□□□ -0.72
ALMS1-206ENST00000613296 SUPT16HQ9Y5B9 1047 aaKnown RBP10.54□□□□□ -0.72
ALMS1-206ENST00000613296 CFAP44Q96MT7 982 aa10.54□□□□□ -0.72
ALMS1-206ENST00000613296 PES1O00541 588 aaKnown RBP10.53□□□□□ -0.72
ALMS1-206ENST00000613296 VPS53Q5VIR6 699 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms