RNA–Protein interactions for RNA: ENST00000612956.4

MYCBP2-212, Transcript of MYC binding protein 2, E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene MYCBP2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYCBP2-212ENST00000612956 ATAD2BQ9ULI0 1458 aa11.43□□□□□ -0.58
MYCBP2-212ENST00000612956 CHADLQ6NUI6 762 aa11.43□□□□□ -0.58
MYCBP2-212ENST00000612956 CCDC88BA6NC98 1476 aa11.4□□□□□ -0.58
MYCBP2-212ENST00000612956 BAZ1BQ9UIG0 1483 aaKnown RBP11.38□□□□□ -0.59
MYCBP2-212ENST00000612956 HMGXB3Q12766 1538 aa11.38□□□□□ -0.59
MYCBP2-212ENST00000612956 CLCN6P51797 869 aa11.38□□□□□ -0.59
MYCBP2-212ENST00000612956 NCAPD3P42695 1498 aa11.35□□□□□ -0.59
MYCBP2-212ENST00000612956 CD44P16070 742 aaKnown RBP11.33□□□□□ -0.6
MYCBP2-212ENST00000612956 FARP1Q9Y4F1 1045 aaPredicted RBP11.3□□□□□ -0.6
MYCBP2-212ENST00000612956 CUX2O14529 1486 aa11.3□□□□□ -0.6
MYCBP2-212ENST00000612956 TRIM41Q8WV44 630 aa11.29□□□□□ -0.6
MYCBP2-212ENST00000612956 POTEIP0CG38 1075 aa11.26□□□□□ -0.61
MYCBP2-212ENST00000612956 DCBLD2Q96PD2 775 aa11.19□□□□□ -0.62
MYCBP2-212ENST00000612956 PRDM2Q13029 1718 aa11.19□□□□□ -0.62
MYCBP2-212ENST00000612956 ZNF579Q8NAF0 562 aaKnown RBP11.17□□□□□ -0.62
MYCBP2-212ENST00000612956 ABCC8Q09428 1581 aa11.17□□□□□ -0.62
MYCBP2-212ENST00000612956 WRNQ14191 1432 aaPredicted RBP eCLIP11.13□□□□□ -0.63
MYCBP2-212ENST00000612956 EEA1Q15075 1411 aa11.12□□□□□ -0.63
MYCBP2-212ENST00000612956 CFTRP13569 1480 aa11.12□□□□□ -0.63
MYCBP2-212ENST00000612956 ZRANB1Q9UGI0 708 aa11.1□□□□□ -0.63
MYCBP2-212ENST00000612956 EHMT2Q96KQ7 1210 aa11.09□□□□□ -0.63
MYCBP2-212ENST00000612956 STAG3Q9UJ98 1225 aa11.09□□□□□ -0.63
MYCBP2-212ENST00000612956 ERCC6Q03468 1493 aa11.09□□□□□ -0.63
MYCBP2-212ENST00000612956 BIVM-ERCC5R4GMW8 1640 aa11.09□□□□□ -0.63
MYCBP2-212ENST00000612956 SYNJ1O43426 1573 aa11.08□□□□□ -0.64
MYCBP2-212ENST00000612956 TOP2BQ02880 1626 aa11.07□□□□□ -0.64
MYCBP2-212ENST00000612956 LOC105371045A0A1W2PR82 267 aa11.05□□□□□ -0.64
MYCBP2-212ENST00000612956 CREBZFQ9NS37 354 aa11.05□□□□□ -0.64
MYCBP2-212ENST00000612956 PLSCR2Q9NRY7 297 aa11.04□□□□□ -0.64
MYCBP2-212ENST00000612956 CADPSQ9ULU8 1353 aa11.04□□□□□ -0.64
MYCBP2-212ENST00000612956 PAK3O75914 559 aaPredicted RBP10.99□□□□□ -0.65
MYCBP2-212ENST00000612956 FAM9AQ8IZU1 332 aaPredicted RBP10.99□□□□□ -0.65
MYCBP2-212ENST00000612956 GALR2O43603 387 aaPredicted RBP10.99□□□□□ -0.65
MYCBP2-212ENST00000612956 NESP48681 1621 aa10.98□□□□□ -0.65
MYCBP2-212ENST00000612956 SOGA1O94964 1423 aa10.97□□□□□ -0.65
MYCBP2-212ENST00000612956 LAMC3Q9Y6N6 1575 aa10.96□□□□□ -0.65
MYCBP2-212ENST00000612956 KIF21BO75037 1637 aa10.96□□□□□ -0.65
MYCBP2-212ENST00000612956 CUX1P39880 1505 aa10.96□□□□□ -0.65
MYCBP2-212ENST00000612956 CSRNP3Q8WYN3 585 aa10.95□□□□□ -0.66
MYCBP2-212ENST00000612956 OTUD5Q96G74 571 aa10.94□□□□□ -0.66
MYCBP2-212ENST00000612956 THOC2Q8NI27 1593 aaKnown RBP10.92□□□□□ -0.66
MYCBP2-212ENST00000612956 GOLGA3Q08378 1498 aa10.92□□□□□ -0.66
MYCBP2-212ENST00000612956 RUSC2Q8N2Y8 1516 aa10.92□□□□□ -0.66
MYCBP2-212ENST00000612956 CEP164Q9UPV0 1460 aa10.91□□□□□ -0.66
MYCBP2-212ENST00000612956 NPM1P06748 294 aaKnown RBP eCLIP10.91□□□□□ -0.66
MYCBP2-212ENST00000612956 TNIKQ9UKE5 1360 aa10.91□□□□□ -0.66
MYCBP2-212ENST00000612956 FANCD2Q9BXW9 1451 aa10.9□□□□□ -0.66
MYCBP2-212ENST00000612956 DNMBPQ6XZF7 1577 aa10.88□□□□□ -0.67
MYCBP2-212ENST00000612956 PHF12Q96QT6 1004 aa10.88□□□□□ -0.67
MYCBP2-212ENST00000612956 ERICH3Q5RHP9 1530 aa10.86□□□□□ -0.67
MYCBP2-212ENST00000612956 SPDYE4A6NLX3 237 aa10.86□□□□□ -0.67
MYCBP2-212ENST00000612956 POTEB2H3BUK9 544 aa10.86□□□□□ -0.67
MYCBP2-212ENST00000612956 KIF27Q86VH2 1401 aa10.85□□□□□ -0.67
MYCBP2-212ENST00000612956 PDS5BQ9NTI5 1447 aa10.84□□□□□ -0.67
MYCBP2-212ENST00000612956 POTEMA6NI47 508 aa10.83□□□□□ -0.68
MYCBP2-212ENST00000612956 FGD5Q6ZNL6 1462 aa10.83□□□□□ -0.68
MYCBP2-212ENST00000612956 PRXQ9BXM0 1461 aa10.82□□□□□ -0.68
MYCBP2-212ENST00000612956 TOPBP1Q92547 1522 aa10.81□□□□□ -0.68
MYCBP2-212ENST00000612956 CEP162Q5TB80 1403 aa10.81□□□□□ -0.68
MYCBP2-212ENST00000612956 MNX1P50219 401 aaPredicted RBP10.8□□□□□ -0.68
MYCBP2-212ENST00000612956 ASTLQ6HA08 431 aaPredicted RBP10.79□□□□□ -0.68
MYCBP2-212ENST00000612956 POTEGQ6S5H5 508 aa10.79□□□□□ -0.68
MYCBP2-212ENST00000612956 PELP1Q8IZL8 1130 aaKnown RBP10.79□□□□□ -0.68
MYCBP2-212ENST00000612956 PCDH10Q9P2E7 1040 aa10.79□□□□□ -0.68
MYCBP2-212ENST00000612956 KIF21AQ7Z4S6 1674 aa10.79□□□□□ -0.68
MYCBP2-212ENST00000612956 SLC39A7Q92504 469 aa10.79□□□□□ -0.68
MYCBP2-212ENST00000612956 C7P10643 843 aa10.78□□□□□ -0.68
MYCBP2-212ENST00000612956 UBTFP17480 764 aaKnown RBP10.78□□□□□ -0.68
MYCBP2-212ENST00000612956 ABCA10Q8WWZ4 1543 aa10.77□□□□□ -0.69
MYCBP2-212ENST00000612956 METRNQ9UJH8 293 aa10.77□□□□□ -0.69
MYCBP2-212ENST00000612956 RAPGEF2Q9Y4G8 1499 aa10.77□□□□□ -0.69
MYCBP2-212ENST00000612956 WDR97A6NE52 1622 aa10.76□□□□□ -0.69
MYCBP2-212ENST00000612956 TRIM26Q12899 539 aaPredicted RBP10.76□□□□□ -0.69
MYCBP2-212ENST00000612956 MAMSTRQ6ZN01 415 aa10.76□□□□□ -0.69
MYCBP2-212ENST00000612956 POLA1P09884 1462 aaPredicted RBP10.75□□□□□ -0.69
MYCBP2-212ENST00000612956 URB2Q14146 1524 aaKnown RBP10.75□□□□□ -0.69
MYCBP2-212ENST00000612956 ATMINO43313 823 aaPredicted RBP10.74□□□□□ -0.69
MYCBP2-212ENST00000612956 MS4A3Q96HJ5 214 aa10.74□□□□□ -0.69
MYCBP2-212ENST00000612956 MRC2Q9UBG0 1479 aa10.73□□□□□ -0.69
MYCBP2-212ENST00000612956 WDR62O43379 1518 aa10.73□□□□□ -0.69
MYCBP2-212ENST00000612956 CUL7Q14999 1698 aa10.72□□□□□ -0.69
MYCBP2-212ENST00000612956 IGF1RP08069 1367 aa10.71□□□□□ -0.69
MYCBP2-212ENST00000612956 CLIP1P30622 1438 aa10.71□□□□□ -0.69
MYCBP2-212ENST00000612956 PCGF6Q9BYE7 350 aa10.69□□□□□ -0.7
MYCBP2-212ENST00000612956 ABCA5Q8WWZ7 1642 aa10.69□□□□□ -0.7
MYCBP2-212ENST00000612956 RAD54L2Q9Y4B4 1467 aa10.67□□□□□ -0.7
MYCBP2-212ENST00000612956 CARMIL1Q5VZK9 1371 aa10.67□□□□□ -0.7
MYCBP2-212ENST00000612956 VPS8Q8N3P4 1428 aa10.67□□□□□ -0.7
MYCBP2-212ENST00000612956 TARBP1Q13395 1621 aaKnown RBP10.66□□□□□ -0.7
MYCBP2-212ENST00000612956 POTEJP0CG39 1038 aa10.65□□□□□ -0.7
MYCBP2-212ENST00000612956 SCUBE2Q9NQ36 999 aa10.65□□□□□ -0.7
MYCBP2-212ENST00000612956 CTTNBP2Q8WZ74 1663 aa10.62□□□□□ -0.71
MYCBP2-212ENST00000612956 GAPVD1Q14C86 1478 aa10.62□□□□□ -0.71
MYCBP2-212ENST00000612956 CCDC61Q9Y6R9 512 aa10.61□□□□□ -0.71
MYCBP2-212ENST00000612956 PBRM1Q86U86 1689 aa10.6□□□□□ -0.71
MYCBP2-212ENST00000612956 TSPYL2Q9H2G4 693 aaPredicted RBP10.6□□□□□ -0.71
MYCBP2-212ENST00000612956 IFT140Q96RY7 1462 aa10.59□□□□□ -0.71
MYCBP2-212ENST00000612956 ATN1P54259 1190 aaPredicted RBP10.59□□□□□ -0.71
MYCBP2-212ENST00000612956 ARAP1Q96P48 1450 aa10.59□□□□□ -0.71
MYCBP2-212ENST00000612956 ARHGAP35Q9NRY4 1499 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms