RNA–Protein interactions for RNA: ENST00000612956.4

MYCBP2-212, Transcript of MYC binding protein 2, E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene MYCBP2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYCBP2-212ENST00000612956 AEBP2Q6ZN18 517 aaPredicted RBP22.14■■□□□ 1.13
MYCBP2-212ENST00000612956 CHIC1Q5VXU3 224 aa20.82■□□□□ 0.92
MYCBP2-212ENST00000612956 SENP3Q9H4L4 574 aaPredicted RBP19.07■□□□□ 0.64
MYCBP2-212ENST00000612956 PHF23Q9BUL5 403 aaPredicted RBP18.69■□□□□ 0.58
MYCBP2-212ENST00000612956 FOXD1Q16676 465 aa17.74■□□□□ 0.43
MYCBP2-212ENST00000612956 POTEDQ86YR6 584 aa17.01■□□□□ 0.31
MYCBP2-212ENST00000612956 MSH5O43196 834 aa16.86■□□□□ 0.29
MYCBP2-212ENST00000612956 PIAS4Q8N2W9 510 aaPredicted RBP16.5■□□□□ 0.23
MYCBP2-212ENST00000612956 PLPPR3Q6T4P5 718 aa16.42■□□□□ 0.22
MYCBP2-212ENST00000612956 PPP6R1Q9UPN7 881 aa16.23■□□□□ 0.19
MYCBP2-212ENST00000612956 ADRA2BP18089 450 aa16.17■□□□□ 0.18
MYCBP2-212ENST00000612956 NISCHQ9Y2I1 1504 aa15.22■□□□□ 0.03
MYCBP2-212ENST00000612956 DMRT2Q9Y5R5 561 aa15.05■□□□□ -0
MYCBP2-212ENST00000612956 SCAF1Q9H7N4 1312 aaKnown RBP14.95□□□□□ -0.02
MYCBP2-212ENST00000612956 MAPK8IP2Q13387 824 aaPredicted RBP14.94□□□□□ -0.02
MYCBP2-212ENST00000612956 CACNB1Q02641 598 aaPredicted RBP14.63□□□□□ -0.07
MYCBP2-212ENST00000612956 DCAF8L1A6NGE4 600 aa14.38□□□□□ -0.11
MYCBP2-212ENST00000612956 HOXD11P31277 338 aaPredicted RBP14.34□□□□□ -0.11
MYCBP2-212ENST00000612956 PPP4R3CPQ6ZMV5 832 aa14.3□□□□□ -0.12
MYCBP2-212ENST00000612956 RNF39Q9H2S5 420 aa14.3□□□□□ -0.12
MYCBP2-212ENST00000612956 CNKSR2Q8WXI2 1034 aa14.16□□□□□ -0.14
MYCBP2-212ENST00000612956 RNF216Q9NWF9 866 aaPredicted RBP14.14□□□□□ -0.15
MYCBP2-212ENST00000612956 C1QBPQ07021 282 aaKnown RBP14.11□□□□□ -0.15
MYCBP2-212ENST00000612956 DNAJC5BQ9UF47 199 aa14.02□□□□□ -0.16
MYCBP2-212ENST00000612956 NCBP3Q53F19 620 aaKnown RBP13.71□□□□□ -0.21
MYCBP2-212ENST00000612956 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.64□□□□□ -0.23
MYCBP2-212ENST00000612956 NPM3O75607 178 aaKnown RBP13.42□□□□□ -0.26
MYCBP2-212ENST00000612956 CCDC180Q9P1Z9 1646 aa13.32□□□□□ -0.28
MYCBP2-212ENST00000612956 U3KPZ7 1027 aaPredicted RBP13.29□□□□□ -0.28
MYCBP2-212ENST00000612956 POTEHQ6S545 545 aa13.28□□□□□ -0.28
MYCBP2-212ENST00000612956 DSG3P32926 999 aa13.23□□□□□ -0.29
MYCBP2-212ENST00000612956 CAPN15O75808 1086 aa13.22□□□□□ -0.29
MYCBP2-212ENST00000612956 SPINK5Q9NQ38 1064 aaPredicted RBP13.17□□□□□ -0.3
MYCBP2-212ENST00000612956 APLP2Q06481 763 aa13.03□□□□□ -0.32
MYCBP2-212ENST00000612956 ZNF219Q9P2Y4 722 aaPredicted RBP12.94□□□□□ -0.34
MYCBP2-212ENST00000612956 SLC4A2P04920 1241 aa12.9□□□□□ -0.34
MYCBP2-212ENST00000612956 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.89□□□□□ -0.35
MYCBP2-212ENST00000612956 HNRNPUL2Q1KMD3 747 aaKnown RBP12.89□□□□□ -0.35
MYCBP2-212ENST00000612956 TRHP20396 242 aaPredicted RBP12.88□□□□□ -0.35
MYCBP2-212ENST00000612956 ABCC9O60706 1549 aa12.88□□□□□ -0.35
MYCBP2-212ENST00000612956 ZCCHC6Q5VYS8 1495 aaKnown RBP12.83□□□□□ -0.36
MYCBP2-212ENST00000612956 ABCB7O75027 752 aa12.83□□□□□ -0.36
MYCBP2-212ENST00000612956 KCNA4P22459 653 aa12.79□□□□□ -0.36
MYCBP2-212ENST00000612956 SAMD1Q6SPF0 538 aaPredicted RBP12.78□□□□□ -0.36
MYCBP2-212ENST00000612956 RBM42Q9BTD8 480 aaKnown RBP12.72□□□□□ -0.37
MYCBP2-212ENST00000612956 DCAF1Q9Y4B6 1507 aa12.68□□□□□ -0.38
MYCBP2-212ENST00000612956 CHRDL2Q6WN34 429 aa12.53□□□□□ -0.4
MYCBP2-212ENST00000612956 MYO15BQ96JP2 1530 aa12.5□□□□□ -0.41
MYCBP2-212ENST00000612956 MYCNP04198 464 aaPredicted RBP12.48□□□□□ -0.41
MYCBP2-212ENST00000612956 POLA2Q14181 598 aa12.47□□□□□ -0.41
MYCBP2-212ENST00000612956 DCAF8L2P0C7V8 631 aa12.36□□□□□ -0.43
MYCBP2-212ENST00000612956 NACADO15069 1562 aa12.34□□□□□ -0.43
MYCBP2-212ENST00000612956 SHROOM4Q9ULL8 1493 aa12.33□□□□□ -0.44
MYCBP2-212ENST00000612956 AKT1S1Q96B36 256 aa12.32□□□□□ -0.44
MYCBP2-212ENST00000612956 ZBTB12Q9Y330 459 aaPredicted RBP12.32□□□□□ -0.44
MYCBP2-212ENST00000612956 SP7Q8TDD2 431 aaPredicted RBP12.28□□□□□ -0.44
MYCBP2-212ENST00000612956 RB1CC1Q8TDY2 1594 aa12.18□□□□□ -0.46
MYCBP2-212ENST00000612956 REM2Q8IYK8 340 aaPredicted RBP12.16□□□□□ -0.46
MYCBP2-212ENST00000612956 PIP4P2Q8N4L2 257 aa12.13□□□□□ -0.47
MYCBP2-212ENST00000612956 FOXD4L1Q9NU39 408 aa12.12□□□□□ -0.47
MYCBP2-212ENST00000612956 SCRIBQ14160 1630 aa12.12□□□□□ -0.47
MYCBP2-212ENST00000612956 ATF5Q9Y2D1 282 aaPredicted RBP12.11□□□□□ -0.47
MYCBP2-212ENST00000612956 OSCARQ8IYS5 282 aa12.07□□□□□ -0.48
MYCBP2-212ENST00000612956 SLC4A1APQ9BWU0 796 aaKnown RBP12.04□□□□□ -0.48
MYCBP2-212ENST00000612956 PITPNM1O00562 1244 aa12.02□□□□□ -0.48
MYCBP2-212ENST00000612956 FXR2P51116 673 aaKnown RBP eCLIP12.02□□□□□ -0.485e-7■■■■■ 28.4
MYCBP2-212ENST00000612956 HAX1O00165 279 aa12.01□□□□□ -0.49
MYCBP2-212ENST00000612956 PABPN1Q86U42 306 aaKnown RBP eCLIP11.96□□□□□ -0.49
MYCBP2-212ENST00000612956 UNC13AQ9UPW8 1703 aa11.95□□□□□ -0.5
MYCBP2-212ENST00000612956 SUPT5HO00267 1087 aaKnown RBP11.95□□□□□ -0.5
MYCBP2-212ENST00000612956 ATXN8OSP0DMR3 200 aa11.86□□□□□ -0.51
MYCBP2-212ENST00000612956 SPDYE2BA6NHP3 402 aa11.85□□□□□ -0.51
MYCBP2-212ENST00000612956 SPDYE6P0CI01 402 aa11.85□□□□□ -0.51
MYCBP2-212ENST00000612956 SPDYE2Q495Y8 402 aa11.85□□□□□ -0.51
MYCBP2-212ENST00000612956 BICRAQ9NZM4 1560 aa11.83□□□□□ -0.52
MYCBP2-212ENST00000612956 RSF1Q96T23 1441 aaPredicted RBP11.82□□□□□ -0.52
MYCBP2-212ENST00000612956 FBLN2P98095 1184 aa11.8□□□□□ -0.52
MYCBP2-212ENST00000612956 BAZ1AQ9NRL2 1556 aaPredicted RBP11.78□□□□□ -0.52
MYCBP2-212ENST00000612956 DNAJC5Q9H3Z4 198 aa11.77□□□□□ -0.52
MYCBP2-212ENST00000612956 EVX2Q03828 476 aa11.76□□□□□ -0.53
MYCBP2-212ENST00000612956 CECR2Q9BXF3 1484 aa11.74□□□□□ -0.53
MYCBP2-212ENST00000612956 SPDYE1Q8NFV5 336 aaPredicted RBP11.74□□□□□ -0.53
MYCBP2-212ENST00000612956 MROH2BQ7Z745 1585 aa11.72□□□□□ -0.53
MYCBP2-212ENST00000612956 ZBTB22O15209 634 aa11.71□□□□□ -0.53
MYCBP2-212ENST00000612956 PRKAR2AP13861 404 aaKnown RBP11.71□□□□□ -0.53
MYCBP2-212ENST00000612956 SMARCA4P51532 1647 aa11.69□□□□□ -0.54
MYCBP2-212ENST00000612956 C19orf67A6NJJ6 358 aa11.65□□□□□ -0.54
MYCBP2-212ENST00000612956 CLEC11AQ9Y240 323 aa11.65□□□□□ -0.54
MYCBP2-212ENST00000612956 WIZO95785 1651 aa11.65□□□□□ -0.54
MYCBP2-212ENST00000612956 SSUH2Q9Y2M2 353 aa11.62□□□□□ -0.55
MYCBP2-212ENST00000612956 CC2D2AQ9P2K1 1620 aa11.6□□□□□ -0.55
MYCBP2-212ENST00000612956 ZNF692Q9BU19 519 aaPredicted RBP11.6□□□□□ -0.55
MYCBP2-212ENST00000612956 PEG3Q9GZU2 1588 aa11.59□□□□□ -0.55
MYCBP2-212ENST00000612956 TOP2AP11388 1531 aaKnown RBP11.58□□□□□ -0.56
MYCBP2-212ENST00000612956 MKRN4PQ13434 485 aaPredicted RBP11.56□□□□□ -0.56
MYCBP2-212ENST00000612956 GABBR2O75899 941 aa11.55□□□□□ -0.56
MYCBP2-212ENST00000612956 EIF4G1Q04637 1599 aaKnown RBP11.52□□□□□ -0.57
MYCBP2-212ENST00000612956 LHX8Q68G74 356 aa11.5□□□□□ -0.57
MYCBP2-212ENST00000612956 SMARCA2P51531 1590 aa11.49□□□□□ -0.57
MYCBP2-212ENST00000612956 PRR29P0C7W0 189 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms