RNA–Protein interactions for RNA: ENST00000612570.4

NDFIP2-205, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-205ENST00000612570 TSPY4P0CV99 314 aa19.86■□□□□ 0.77
NDFIP2-205ENST00000612570 TSPY10P0CW01 314 aa19.86■□□□□ 0.77
NDFIP2-205ENST00000612570 TDRD9Q8NDG6 1382 aaKnown RBP19.82■□□□□ 0.76
NDFIP2-205ENST00000612570 PLEKHD1A6NEE1 506 aa19.78■□□□□ 0.76
NDFIP2-205ENST00000612570 SIN3AQ96ST3 1273 aa19.77■□□□□ 0.76
NDFIP2-205ENST00000612570 SCAF1Q9H7N4 1312 aaKnown RBP19.76■□□□□ 0.75
NDFIP2-205ENST00000612570 FKBP8Q14318 412 aa19.76■□□□□ 0.75
NDFIP2-205ENST00000612570 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.76■□□□□ 0.753e-6■□□□□ 9
NDFIP2-205ENST00000612570 PDS5BQ9NTI5 1447 aa19.76■□□□□ 0.75
NDFIP2-205ENST00000612570 NPM2Q86SE8 214 aaKnown RBP19.74■□□□□ 0.75
NDFIP2-205ENST00000612570 ERCC6Q03468 1493 aa19.74■□□□□ 0.75
NDFIP2-205ENST00000612570 CFDP1Q9UEE9 299 aaPredicted RBP19.74■□□□□ 0.75
NDFIP2-205ENST00000612570 HNRNPUQ00839 825 aaKnown RBP eCLIP19.71■□□□□ 0.75
NDFIP2-205ENST00000612570 SALL2Q9Y467 1007 aaPredicted RBP19.7■□□□□ 0.74
NDFIP2-205ENST00000612570 EIF4G1Q04637 1599 aaKnown RBP19.69■□□□□ 0.74
NDFIP2-205ENST00000612570 KDM2AQ9Y2K7 1162 aa19.69■□□□□ 0.74
NDFIP2-205ENST00000612570 NPM1P06748 294 aaKnown RBP eCLIP19.68■□□□□ 0.74
NDFIP2-205ENST00000612570 SLC24A1O60721 1099 aa19.68■□□□□ 0.74
NDFIP2-205ENST00000612570 EIF4G2P78344 907 aaKnown RBP eCLIP19.68■□□□□ 0.74
NDFIP2-205ENST00000612570 NCAPD3P42695 1498 aa19.67■□□□□ 0.74
NDFIP2-205ENST00000612570 KCNH8Q96L42 1107 aa19.67■□□□□ 0.74
NDFIP2-205ENST00000612570 CANXP27824 592 aaKnown RBP19.66■□□□□ 0.74
NDFIP2-205ENST00000612570 FAM9BQ8IZU0 186 aa19.66■□□□□ 0.74
NDFIP2-205ENST00000612570 FANCD2Q9BXW9 1451 aa19.62■□□□□ 0.73
NDFIP2-205ENST00000612570 SETD5Q9C0A6 1442 aa19.6■□□□□ 0.73
NDFIP2-205ENST00000612570 CHGAP10645 457 aaKnown RBP19.6■□□□□ 0.73
NDFIP2-205ENST00000612570 FHOD3Q2V2M9 1422 aa19.59■□□□□ 0.73
NDFIP2-205ENST00000612570 ARHGAP35Q9NRY4 1499 aa19.59■□□□□ 0.73
NDFIP2-205ENST00000612570 FMN1Q68DA7 1419 aa19.59■□□□□ 0.73
NDFIP2-205ENST00000612570 ZBTB47Q9UFB7 747 aaPredicted RBP19.57■□□□□ 0.72
NDFIP2-205ENST00000612570 IGF1RP08069 1367 aa19.57■□□□□ 0.72
NDFIP2-205ENST00000612570 RAB3GAP2Q9H2M9 1393 aa19.56■□□□□ 0.72
NDFIP2-205ENST00000612570 MRS2Q9HD23 443 aa19.56■□□□□ 0.72
NDFIP2-205ENST00000612570 ANP32AP39687 249 aaKnown RBP19.54■□□□□ 0.72
NDFIP2-205ENST00000612570 IRX6P78412 446 aaPredicted RBP19.53■□□□□ 0.72
NDFIP2-205ENST00000612570 TMC1Q8TDI8 760 aa19.52■□□□□ 0.71
NDFIP2-205ENST00000612570 TIMELESSQ9UNS1 1208 aa19.51■□□□□ 0.71
NDFIP2-205ENST00000612570 FGD5Q6ZNL6 1462 aa19.5■□□□□ 0.71
NDFIP2-205ENST00000612570 RGL3Q3MIN7 710 aa19.5■□□□□ 0.71
NDFIP2-205ENST00000612570 SENP3-EIF4A1A0A087X0R7 540 aa19.5■□□□□ 0.71
NDFIP2-205ENST00000612570 SYNJ1O43426 1573 aa19.48■□□□□ 0.71
NDFIP2-205ENST00000612570 CFTRP13569 1480 aa19.44■□□□□ 0.7
NDFIP2-205ENST00000612570 BICRAQ9NZM4 1560 aa19.43■□□□□ 0.7
NDFIP2-205ENST00000612570 RAD54L2Q9Y4B4 1467 aa19.43■□□□□ 0.7
NDFIP2-205ENST00000612570 EIF5BO60841 1220 aaKnown RBP19.42■□□□□ 0.7
NDFIP2-205ENST00000612570 NBR1Q14596 966 aa19.41■□□□□ 0.7
NDFIP2-205ENST00000612570 DHX57Q6P158 1386 aaKnown RBP19.39■□□□□ 0.69
NDFIP2-205ENST00000612570 KIF21BO75037 1637 aa19.39■□□□□ 0.69
NDFIP2-205ENST00000612570 FOXD1Q16676 465 aa19.38■□□□□ 0.69
NDFIP2-205ENST00000612570 NEFMP07197 916 aa19.38■□□□□ 0.69
NDFIP2-205ENST00000612570 CARMIL2Q6F5E8 1435 aa19.38■□□□□ 0.69
NDFIP2-205ENST00000612570 CARD11Q9BXL7 1154 aa19.38■□□□□ 0.69
NDFIP2-205ENST00000612570 STAG3Q9UJ98 1225 aa19.37■□□□□ 0.69
NDFIP2-205ENST00000612570 ESF1Q9H501 851 aaKnown RBP19.36■□□□□ 0.69
NDFIP2-205ENST00000612570 CCDC136Q96JN2 1154 aa19.34■□□□□ 0.69
NDFIP2-205ENST00000612570 PLPPR3Q6T4P5 718 aa19.33■□□□□ 0.69
NDFIP2-205ENST00000612570 ARXQ96QS3 562 aa19.33■□□□□ 0.69
NDFIP2-205ENST00000612570 PPP1R15AO75807 674 aaPredicted RBP19.33■□□□□ 0.69
NDFIP2-205ENST00000612570 MPHOSPH9Q99550 1183 aa19.32■□□□□ 0.68
NDFIP2-205ENST00000612570 SENP3Q9H4L4 574 aaPredicted RBP19.32■□□□□ 0.68
NDFIP2-205ENST00000612570 GAPVD1Q14C86 1478 aa19.32■□□□□ 0.68
NDFIP2-205ENST00000612570 JPH4Q96JJ6 628 aa19.31■□□□□ 0.68
NDFIP2-205ENST00000612570 HMGXB3Q12766 1538 aa19.31■□□□□ 0.68
NDFIP2-205ENST00000612570 PRXQ9BXM0 1461 aa19.29■□□□□ 0.68
NDFIP2-205ENST00000612570 PKD2Q13563 968 aa19.29■□□□□ 0.68
NDFIP2-205ENST00000612570 ARAP1Q96P48 1450 aa19.29■□□□□ 0.68
NDFIP2-205ENST00000612570 TOP2BQ02880 1626 aa19.27■□□□□ 0.68
NDFIP2-205ENST00000612570 HSPA5P11021 654 aaKnown RBP19.27■□□□□ 0.67
NDFIP2-205ENST00000612570 CUX1P39880 1505 aa19.27■□□□□ 0.67
NDFIP2-205ENST00000612570 ERICH3Q5RHP9 1530 aa19.26■□□□□ 0.67
NDFIP2-205ENST00000612570 DCAF11Q8TEB1 546 aa19.26■□□□□ 0.67
NDFIP2-205ENST00000612570 HSP90AA1P07900 732 aaKnown RBP19.24■□□□□ 0.67
NDFIP2-205ENST00000612570 NESP48681 1621 aa19.24■□□□□ 0.67
NDFIP2-205ENST00000612570 WDR43Q15061 677 aaKnown RBP eCLIP19.24■□□□□ 0.67
NDFIP2-205ENST00000612570 CCDC18Q5T9S5 1454 aa19.21■□□□□ 0.67
NDFIP2-205ENST00000612570 PHLDB1Q86UU1 1377 aa19.21■□□□□ 0.66
NDFIP2-205ENST00000612570 SUPT16HQ9Y5B9 1047 aaKnown RBP19.2■□□□□ 0.66
NDFIP2-205ENST00000612570 L3MBTL2Q969R5 705 aa19.2■□□□□ 0.66
NDFIP2-205ENST00000612570 NUP155O75694 1391 aa19.18■□□□□ 0.66
NDFIP2-205ENST00000612570 ANKRD30AQ9BXX3 1397 aa19.18■□□□□ 0.66
NDFIP2-205ENST00000612570 AQRO60306 1485 aaKnown RBP eCLIP19.18■□□□□ 0.66
NDFIP2-205ENST00000612570 CCER2I3L3R5 266 aa19.17■□□□□ 0.66
NDFIP2-205ENST00000612570 CC2D2AQ9P2K1 1620 aa19.17■□□□□ 0.66
NDFIP2-205ENST00000612570 LRRC9Q6ZRR7 1453 aa19.16■□□□□ 0.66
NDFIP2-205ENST00000612570 HNRNPMP52272 730 aaKnown RBP eCLIP19.15■□□□□ 0.66
NDFIP2-205ENST00000612570 PEG3Q9GZU2 1588 aa19.14■□□□□ 0.65
NDFIP2-205ENST00000612570 CDCA8Q53HL2 280 aa19.12■□□□□ 0.65
NDFIP2-205ENST00000612570 KNSTRNQ9Y448 316 aa19.12■□□□□ 0.65
NDFIP2-205ENST00000612570 EFCAB2Q5VUJ9 269 aa19.12■□□□□ 0.65
NDFIP2-205ENST00000612570 TOPBP1Q92547 1522 aa19.11■□□□□ 0.65
NDFIP2-205ENST00000612570 POLA1P09884 1462 aaPredicted RBP19.11■□□□□ 0.65
NDFIP2-205ENST00000612570 FGD6Q6ZV73 1430 aa19.11■□□□□ 0.65
NDFIP2-205ENST00000612570 UPF2Q9HAU5 1272 aaKnown RBP19.1■□□□□ 0.65
NDFIP2-205ENST00000612570 CASKIN1Q8WXD9 1431 aa19.09■□□□□ 0.65
NDFIP2-205ENST00000612570 UNC13AQ9UPW8 1703 aa19.09■□□□□ 0.65
NDFIP2-205ENST00000612570 RRBP1Q9P2E9 1410 aaKnown RBP19.06■□□□□ 0.64
NDFIP2-205ENST00000612570 PLEKHG5O94827 1062 aa19.05■□□□□ 0.64
NDFIP2-205ENST00000612570 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.05■□□□□ 0.64
NDFIP2-205ENST00000612570 MYOM3Q5VTT5 1437 aa19.05■□□□□ 0.64
NDFIP2-205ENST00000612570 DNAJC5BQ9UF47 199 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms