RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 AQRO60306 1485 aaKnown RBP eCLIP15.51■□□□□ 0.073e-8■■■■■ 32.4
PABPC1-224ENST00000610907 ABCA5Q8WWZ7 1642 aa15.5■□□□□ 0.07
PABPC1-224ENST00000610907 ZNF316A6NFI3 1004 aaPredicted RBP15.5■□□□□ 0.07
PABPC1-224ENST00000610907 DIEXFQ68CQ4 756 aaKnown RBP15.49■□□□□ 0.07
PABPC1-224ENST00000610907 CTTNBP2Q8WZ74 1663 aa15.49■□□□□ 0.07
PABPC1-224ENST00000610907 LRRC9Q6ZRR7 1453 aa15.49■□□□□ 0.07
PABPC1-224ENST00000610907 GAPVD1Q14C86 1478 aa15.47■□□□□ 0.07
PABPC1-224ENST00000610907 FYCO1Q9BQS8 1478 aa15.46■□□□□ 0.07
PABPC1-224ENST00000610907 CFAP43Q8NDM7 1665 aa15.46■□□□□ 0.07
PABPC1-224ENST00000610907 CASKIN1Q8WXD9 1431 aa15.45■□□□□ 0.06
PABPC1-224ENST00000610907 DHX57Q6P158 1386 aaKnown RBP15.45■□□□□ 0.06
PABPC1-224ENST00000610907 KIF21AQ7Z4S6 1674 aa15.44■□□□□ 0.06
PABPC1-224ENST00000610907 FMN1Q68DA7 1419 aa15.44■□□□□ 0.06
PABPC1-224ENST00000610907 PCF11O94913 1555 aaKnown RBP15.43■□□□□ 0.06
PABPC1-224ENST00000610907 TDRD9Q8NDG6 1382 aaKnown RBP15.42■□□□□ 0.06
PABPC1-224ENST00000610907 TARBP1Q13395 1621 aaKnown RBP15.41■□□□□ 0.06
PABPC1-224ENST00000610907 FHOD3Q2V2M9 1422 aa15.4■□□□□ 0.06
PABPC1-224ENST00000610907 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.39■□□□□ 0.059e-8■□□□□ 8.7
PABPC1-224ENST00000610907 SAMD9Q5K651 1589 aa15.38■□□□□ 0.05
PABPC1-224ENST00000610907 P3H3Q8IVL6 736 aa15.36■□□□□ 0.05
PABPC1-224ENST00000610907 MRC2Q9UBG0 1479 aa15.36■□□□□ 0.05
PABPC1-224ENST00000610907 PHLDB1Q86UU1 1377 aa15.36■□□□□ 0.05
PABPC1-224ENST00000610907 THOC2Q8NI27 1593 aaKnown RBP15.33■□□□□ 0.05
PABPC1-224ENST00000610907 SNAPC4Q5SXM2 1469 aa15.33■□□□□ 0.04
PABPC1-224ENST00000610907 SETD5Q9C0A6 1442 aa15.32■□□□□ 0.04
PABPC1-224ENST00000610907 ATP1B4Q9UN42 357 aaPredicted RBP15.3■□□□□ 0.04
PABPC1-224ENST00000610907 RAB3GAP2Q9H2M9 1393 aa15.3■□□□□ 0.04
PABPC1-224ENST00000610907 PBRM1Q86U86 1689 aa15.29■□□□□ 0.04
PABPC1-224ENST00000610907 GRIN2BQ13224 1484 aa15.28■□□□□ 0.04
PABPC1-224ENST00000610907 IFT140Q96RY7 1462 aa15.27■□□□□ 0.03
PABPC1-224ENST00000610907 CENPBP07199 599 aaPredicted RBP15.27■□□□□ 0.03
PABPC1-224ENST00000610907 ITGAEP38570 1179 aa15.27■□□□□ 0.03
PABPC1-224ENST00000610907 ADAMTS12P58397 1594 aa15.26■□□□□ 0.03
PABPC1-224ENST00000610907 FAM50AQ14320 339 aaKnown RBP15.25■□□□□ 0.03
PABPC1-224ENST00000610907 WDR62O43379 1518 aa15.25■□□□□ 0.03
PABPC1-224ENST00000610907 MTUS2Q5JR59 1369 aa15.25■□□□□ 0.03
PABPC1-224ENST00000610907 ACIN1Q9UKV3 1341 aaKnown RBP15.24■□□□□ 0.03
PABPC1-224ENST00000610907 FGD6Q6ZV73 1430 aa15.23■□□□□ 0.03
PABPC1-224ENST00000610907 CCDC18Q5T9S5 1454 aa15.23■□□□□ 0.03
PABPC1-224ENST00000610907 IQGAP2Q13576 1575 aa15.22■□□□□ 0.03
PABPC1-224ENST00000610907 TIMELESSQ9UNS1 1208 aa15.21■□□□□ 0.03
PABPC1-224ENST00000610907 EHBP1L1Q8N3D4 1523 aa15.21■□□□□ 0.03
PABPC1-224ENST00000610907 MAPKBP1O60336 1514 aa15.19■□□□□ 0.02
PABPC1-224ENST00000610907 SUPT6HQ7KZ85 1726 aaKnown RBP15.19■□□□□ 0.02
PABPC1-224ENST00000610907 UGGT2Q9NYU1 1516 aa15.18■□□□□ 0.02
PABPC1-224ENST00000610907 LRRIQ1Q96JM4 1722 aa15.18■□□□□ 0.02
PABPC1-224ENST00000610907 SCAF1Q9H7N4 1312 aaKnown RBP15.17■□□□□ 0.02
PABPC1-224ENST00000610907 MYOM3Q5VTT5 1437 aa15.17■□□□□ 0.02
PABPC1-224ENST00000610907 HECW1Q76N89 1606 aa15.17■□□□□ 0.02
PABPC1-224ENST00000610907 NCOA2Q15596 1464 aa15.17■□□□□ 0.02
PABPC1-224ENST00000610907 ARHGEF11O15085 1522 aa15.16■□□□□ 0.02
PABPC1-224ENST00000610907 KIAA0586Q9BVV6 1533 aa15.15■□□□□ 0.02
PABPC1-224ENST00000610907 NEUROD1Q13562 356 aa15.14■□□□□ 0.01
PABPC1-224ENST00000610907 MIER1Q8N108 512 aa15.13■□□□□ 0.01
PABPC1-224ENST00000610907 ERCC6Q03468 1493 aa15.13■□□□□ 0.01
PABPC1-224ENST00000610907 HFM1A2PYH4 1435 aa15.12■□□□□ 0.01
PABPC1-224ENST00000610907 ZNF608Q9ULD9 1512 aaPredicted RBP15.12■□□□□ 0.01
PABPC1-224ENST00000610907 EPRSP07814 1512 aaKnown RBP15.11■□□□□ 0.01
PABPC1-224ENST00000610907 TCOF1Q13428 1488 aaKnown RBP15.09■□□□□ 0.01
PABPC1-224ENST00000610907 MIA2Q96PC5 1412 aa15.08■□□□□ 0
PABPC1-224ENST00000610907 GRIN2AQ12879 1464 aa15.08■□□□□ 0
PABPC1-224ENST00000610907 MAGI1Q96QZ7 1491 aaPredicted RBP15.08■□□□□ 0
PABPC1-224ENST00000610907 PTPN23Q9H3S7 1636 aa15.08■□□□□ 0
PABPC1-224ENST00000610907 MAGI3Q5TCQ9 1506 aa15.07■□□□□ 0
PABPC1-224ENST00000610907 EIF4G3O43432 1585 aaKnown RBP15.07■□□□□ 0
PABPC1-224ENST00000610907 UACAQ9BZF9 1416 aa15.07■□□□□ 0
PABPC1-224ENST00000610907 PTPRKQ15262 1439 aa15.06■□□□□ 0
PABPC1-224ENST00000610907 KIAA0556O60303 1618 aa15.05■□□□□ 0
PABPC1-224ENST00000610907 AKNAQ7Z591 1439 aa15.05■□□□□ 0
PABPC1-224ENST00000610907 DISP1Q96F81 1524 aa15.05■□□□□ -0
PABPC1-224ENST00000610907 NAIPQ13075 1403 aa15.04■□□□□ -0
PABPC1-224ENST00000610907 SYNJ2O15056 1496 aa15.02■□□□□ -0
PABPC1-224ENST00000610907 SIN3AQ96ST3 1273 aa15.01□□□□□ -0.01
PABPC1-224ENST00000610907 CDK11AQ9UQ88 783 aaPredicted RBP15□□□□□ -0.01
PABPC1-224ENST00000610907 PPP1R15AO75807 674 aaPredicted RBP14.99□□□□□ -0.01
PABPC1-224ENST00000610907 CDK13Q14004 1512 aaKnown RBP14.99□□□□□ -0.01
PABPC1-224ENST00000610907 RAPGEF6Q8TEU7 1601 aa14.98□□□□□ -0.01
PABPC1-224ENST00000610907 CHMP7Q8WUX9 453 aaPredicted RBP14.98□□□□□ -0.01
PABPC1-224ENST00000610907 GTF3C3Q9Y5Q9 886 aa14.97□□□□□ -0.01
PABPC1-224ENST00000610907 GCC2Q8IWJ2 1684 aa14.97□□□□□ -0.01
PABPC1-224ENST00000610907 NUP153P49790 1475 aaKnown RBP14.96□□□□□ -0.01
PABPC1-224ENST00000610907 NUP160Q12769 1436 aa14.95□□□□□ -0.02
PABPC1-224ENST00000610907 CARMIL2Q6F5E8 1435 aa14.95□□□□□ -0.02
PABPC1-224ENST00000610907 ROCK1Q13464 1354 aa14.94□□□□□ -0.02
PABPC1-224ENST00000610907 TONSLQ96HA7 1378 aa14.94□□□□□ -0.02
PABPC1-224ENST00000610907 YTHDC1Q96MU7 727 aaKnown RBP14.94□□□□□ -0.02
PABPC1-224ENST00000610907 CEP170Q5SW79 1584 aa14.93□□□□□ -0.02
PABPC1-224ENST00000610907 TROQ12816 1431 aaPredicted RBP14.9□□□□□ -0.02
PABPC1-224ENST00000610907 JPH4Q96JJ6 628 aa14.89□□□□□ -0.03
PABPC1-224ENST00000610907 DNMT1P26358 1616 aaKnown RBP14.88□□□□□ -0.03
PABPC1-224ENST00000610907 RRP7BPQ9NSQ0 103 aa14.88□□□□□ -0.03
PABPC1-224ENST00000610907 DAPK1P53355 1430 aa14.88□□□□□ -0.03
PABPC1-224ENST00000610907 PELP1Q8IZL8 1130 aaKnown RBP14.87□□□□□ -0.03
PABPC1-224ENST00000610907 ADCY10Q96PN6 1610 aa14.86□□□□□ -0.03
PABPC1-224ENST00000610907 CHIC2Q9UKJ5 165 aa14.86□□□□□ -0.03
PABPC1-224ENST00000610907 ITSN2Q9NZM3 1697 aa14.85□□□□□ -0.03
PABPC1-224ENST00000610907 ABCC5O15440 1437 aa14.85□□□□□ -0.03
PABPC1-224ENST00000610907 FBLN2P98095 1184 aa14.84□□□□□ -0.03
PABPC1-224ENST00000610907 ARID3CA6NKF2 412 aa14.83□□□□□ -0.04
PABPC1-224ENST00000610907 TRIM52Q96A61 297 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms