RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 SETD5Q9C0A6 1442 aa24.17■■□□□ 1.46
TNIP1-220ENST00000610535 FKBP8Q14318 412 aa24.17■■□□□ 1.46
TNIP1-220ENST00000610535 NESP48681 1621 aa24.16■■□□□ 1.46
TNIP1-220ENST00000610535 FAM50AQ14320 339 aaKnown RBP24.15■■□□□ 1.46
TNIP1-220ENST00000610535 WDR97A6NE52 1622 aa24.15■■□□□ 1.46
TNIP1-220ENST00000610535 HIRIP3Q9BW71 556 aaPredicted RBP24.14■■□□□ 1.46
TNIP1-220ENST00000610535 ANP32EQ9BTT0 268 aa24.13■■□□□ 1.45
TNIP1-220ENST00000610535 IGF1RP08069 1367 aa24.12■■□□□ 1.45
TNIP1-220ENST00000610535 PHLDB1Q86UU1 1377 aa24.12■■□□□ 1.45
TNIP1-220ENST00000610535 TIAM1Q13009 1591 aa24.12■■□□□ 1.45
TNIP1-220ENST00000610535 PPP1R15AO75807 674 aaPredicted RBP24.09■■□□□ 1.45
TNIP1-220ENST00000610535 LRRC9Q6ZRR7 1453 aa24.07■■□□□ 1.44
TNIP1-220ENST00000610535 P3H3Q8IVL6 736 aa24.06■■□□□ 1.44
TNIP1-220ENST00000610535 FGD5Q6ZNL6 1462 aa24.06■■□□□ 1.44
TNIP1-220ENST00000610535 ATP1B4Q9UN42 357 aaPredicted RBP24.05■■□□□ 1.44
TNIP1-220ENST00000610535 FANCD2Q9BXW9 1451 aa24.04■■□□□ 1.44
TNIP1-220ENST00000610535 TRIM52Q96A61 297 aa24.03■■□□□ 1.44
TNIP1-220ENST00000610535 MAP3K1Q13233 1512 aa24.03■■□□□ 1.44
TNIP1-220ENST00000610535 CARMIL1Q5VZK9 1371 aa24.02■■□□□ 1.44
TNIP1-220ENST00000610535 RAD54L2Q9Y4B4 1467 aa23.99■■□□□ 1.43
TNIP1-220ENST00000610535 NEFLP07196 543 aa23.94■■□□□ 1.42
TNIP1-220ENST00000610535 ANP32CO43423 234 aa23.94■■□□□ 1.42
TNIP1-220ENST00000610535 TIMELESSQ9UNS1 1208 aa23.94■■□□□ 1.42
TNIP1-220ENST00000610535 CCER2I3L3R5 266 aa23.91■■□□□ 1.42
TNIP1-220ENST00000610535 RBM19Q9Y4C8 960 aaKnown RBP23.9■■□□□ 1.42
TNIP1-220ENST00000610535 FHAD1B1AJZ9 1412 aa23.89■■□□□ 1.42
TNIP1-220ENST00000610535 PRDM2Q13029 1718 aa23.89■■□□□ 1.41
TNIP1-220ENST00000610535 PCF11O94913 1555 aaKnown RBP23.86■■□□□ 1.41
TNIP1-220ENST00000610535 FHOD3Q2V2M9 1422 aa23.83■■□□□ 1.41
TNIP1-220ENST00000610535 CFAP43Q8NDM7 1665 aa23.81■■□□□ 1.4
TNIP1-220ENST00000610535 POLA1P09884 1462 aaPredicted RBP23.8■■□□□ 1.4
TNIP1-220ENST00000610535 TOPBP1Q92547 1522 aa23.8■■□□□ 1.4
TNIP1-220ENST00000610535 TDRD9Q8NDG6 1382 aaKnown RBP23.79■■□□□ 1.4
TNIP1-220ENST00000610535 TONSLQ96HA7 1378 aa23.79■■□□□ 1.4
TNIP1-220ENST00000610535 BCL11AQ9H165 835 aa23.74■■□□□ 1.39
TNIP1-220ENST00000610535 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.71■■□□□ 1.39
TNIP1-220ENST00000610535 DNMBPQ6XZF7 1577 aa23.71■■□□□ 1.39
TNIP1-220ENST00000610535 URB2Q14146 1524 aaKnown RBP23.71■■□□□ 1.39
TNIP1-220ENST00000610535 FYCO1Q9BQS8 1478 aa23.69■■□□□ 1.38
TNIP1-220ENST00000610535 CASKIN1Q8WXD9 1431 aa23.69■■□□□ 1.38
TNIP1-220ENST00000610535 FGD6Q6ZV73 1430 aa23.69■■□□□ 1.38
TNIP1-220ENST00000610535 PTPRKQ15262 1439 aa23.68■■□□□ 1.38
TNIP1-220ENST00000610535 CCDC18Q5T9S5 1454 aa23.68■■□□□ 1.38
TNIP1-220ENST00000610535 IRX6P78412 446 aaPredicted RBP23.68■■□□□ 1.38
TNIP1-220ENST00000610535 HNRNPUQ00839 825 aaKnown RBP eCLIP23.67■■□□□ 1.38
TNIP1-220ENST00000610535 MSH5O43196 834 aa23.63■■□□□ 1.37
TNIP1-220ENST00000610535 UACAQ9BZF9 1416 aa23.63■■□□□ 1.37
TNIP1-220ENST00000610535 ABCA10Q8WWZ4 1543 aa23.61■■□□□ 1.37
TNIP1-220ENST00000610535 MTUS2Q5JR59 1369 aa23.61■■□□□ 1.37
TNIP1-220ENST00000610535 HFM1A2PYH4 1435 aa23.6■■□□□ 1.37
TNIP1-220ENST00000610535 AQRO60306 1485 aaKnown RBP eCLIP23.6■■□□□ 1.371e-6■■■■□ 26.5
TNIP1-220ENST00000610535 EFCAB5A4FU69 1503 aa23.58■■□□□ 1.36
TNIP1-220ENST00000610535 PDS5BQ9NTI5 1447 aa23.57■■□□□ 1.36
TNIP1-220ENST00000610535 LAMC3Q9Y6N6 1575 aa23.56■■□□□ 1.36
TNIP1-220ENST00000610535 PTPN23Q9H3S7 1636 aa23.56■■□□□ 1.36
TNIP1-220ENST00000610535 NAIPQ13075 1403 aa23.56■■□□□ 1.36
TNIP1-220ENST00000610535 FMN1Q68DA7 1419 aa23.54■■□□□ 1.36
TNIP1-220ENST00000610535 WASHC2AQ641Q2 1341 aa23.54■■□□□ 1.36
TNIP1-220ENST00000610535 KIF21AQ7Z4S6 1674 aa23.53■■□□□ 1.36
TNIP1-220ENST00000610535 HSPA5P11021 654 aaKnown RBP23.53■■□□□ 1.36
TNIP1-220ENST00000610535 KDM5BQ9UGL1 1544 aa23.52■■□□□ 1.36
TNIP1-220ENST00000610535 SNAPC4Q5SXM2 1469 aa23.52■■□□□ 1.36
TNIP1-220ENST00000610535 ARID3CA6NKF2 412 aa23.52■■□□□ 1.36
TNIP1-220ENST00000610535 RRP7BPQ9NSQ0 103 aa23.51■■□□□ 1.35
TNIP1-220ENST00000610535 CDK11AQ9UQ88 783 aaPredicted RBP23.51■■□□□ 1.35
TNIP1-220ENST00000610535 CCDC184Q52MB2 194 aa23.5■■□□□ 1.35
TNIP1-220ENST00000610535 CHIC2Q9UKJ5 165 aa23.49■■□□□ 1.35
TNIP1-220ENST00000610535 NCOA2Q15596 1464 aa23.48■■□□□ 1.35
TNIP1-220ENST00000610535 GAPVD1Q14C86 1478 aa23.47■■□□□ 1.35
TNIP1-220ENST00000610535 MYOM3Q5VTT5 1437 aa23.46■■□□□ 1.35
TNIP1-220ENST00000610535 CTTNBP2Q8WZ74 1663 aa23.45■■□□□ 1.34
TNIP1-220ENST00000610535 FANCIQ9NVI1 1328 aa23.43■■□□□ 1.34
TNIP1-220ENST00000610535 LRRIQ1Q96JM4 1722 aa23.41■■□□□ 1.34
TNIP1-220ENST00000610535 EIF4G2P78344 907 aaKnown RBP eCLIP23.41■■□□□ 1.34
TNIP1-220ENST00000610535 CUL7Q14999 1698 aa23.4■■□□□ 1.34
TNIP1-220ENST00000610535 C11orf95C9JLR9 678 aaPredicted RBP23.39■■□□□ 1.34
TNIP1-220ENST00000610535 ERICH6Q7L0X2 663 aa23.39■■□□□ 1.33
TNIP1-220ENST00000610535 FAM9BQ8IZU0 186 aa23.38■■□□□ 1.33
TNIP1-220ENST00000610535 DENND4BO75064 1496 aaPredicted RBP23.37■■□□□ 1.33
TNIP1-220ENST00000610535 FOXD1Q16676 465 aa23.36■■□□□ 1.33
TNIP1-220ENST00000610535 PPP4R2Q9NY27 417 aa23.36■■□□□ 1.33
TNIP1-220ENST00000610535 GRIN2BQ13224 1484 aa23.36■■□□□ 1.33
TNIP1-220ENST00000610535 L3MBTL2Q969R5 705 aa23.35■■□□□ 1.33
TNIP1-220ENST00000610535 PRKRIP1Q9H875 184 aaPredicted RBP23.33■■□□□ 1.33
TNIP1-220ENST00000610535 CNTLNQ9NXG0 1405 aa23.33■■□□□ 1.32
TNIP1-220ENST00000610535 SUPT6HQ7KZ85 1726 aaKnown RBP23.32■■□□□ 1.32
TNIP1-220ENST00000610535 B4GALNT3Q6L9W6 998 aa23.32■■□□□ 1.32
TNIP1-220ENST00000610535 MPHOSPH9Q99550 1183 aa23.32■■□□□ 1.32
TNIP1-220ENST00000610535 ABCA5Q8WWZ7 1642 aa23.31■■□□□ 1.32
TNIP1-220ENST00000610535 ERICH6BQ5W0A0 696 aa23.31■■□□□ 1.32
TNIP1-220ENST00000610535 MRS2Q9HD23 443 aa23.31■■□□□ 1.32
TNIP1-220ENST00000610535 SAMD9Q5K651 1589 aa23.3■■□□□ 1.32
TNIP1-220ENST00000610535 MAGI3Q5TCQ9 1506 aa23.3■■□□□ 1.32
TNIP1-220ENST00000610535 KDM6BO15054 1643 aa23.29■■□□□ 1.32
TNIP1-220ENST00000610535 UGGT2Q9NYU1 1516 aa23.28■■□□□ 1.32
TNIP1-220ENST00000610535 EHBP1L1Q8N3D4 1523 aa23.28■■□□□ 1.32
TNIP1-220ENST00000610535 CCDC7Q96M83 1385 aa23.27■■□□□ 1.32
TNIP1-220ENST00000610535 ZNF608Q9ULD9 1512 aaPredicted RBP23.27■■□□□ 1.32
TNIP1-220ENST00000610535 TARBP1Q13395 1621 aaKnown RBP23.24■■□□□ 1.31
TNIP1-220ENST00000610535 FBLN2P98095 1184 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms