RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 FHAD1B1AJZ9 1412 aa31.95■■■□□ 2.7
SHANK2-220ENST00000608988 IGF1RP08069 1367 aa31.94■■■□□ 2.7
SHANK2-220ENST00000608988 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.87■■■□□ 2.69
SHANK2-220ENST00000608988 WDR97A6NE52 1622 aa31.85■■■□□ 2.69
SHANK2-220ENST00000608988 CARMIL1Q5VZK9 1371 aa31.83■■■□□ 2.69
SHANK2-220ENST00000608988 ITGAEP38570 1179 aa31.82■■■□□ 2.69
SHANK2-220ENST00000608988 PHLDB1Q86UU1 1377 aa31.8■■■□□ 2.68
SHANK2-220ENST00000608988 CCER2I3L3R5 266 aa31.78■■■□□ 2.68
SHANK2-220ENST00000608988 ANP32EQ9BTT0 268 aa31.77■■■□□ 2.68
SHANK2-220ENST00000608988 PPP1R15AO75807 674 aaPredicted RBP31.75■■■□□ 2.67
SHANK2-220ENST00000608988 PCF11O94913 1555 aaKnown RBP31.74■■■□□ 2.67
SHANK2-220ENST00000608988 AQRO60306 1485 aaKnown RBP eCLIP31.74■■■□□ 2.67
SHANK2-220ENST00000608988 EFCAB5A4FU69 1503 aa31.72■■■□□ 2.67
SHANK2-220ENST00000608988 FYCO1Q9BQS8 1478 aa31.72■■■□□ 2.67
SHANK2-220ENST00000608988 FGD5Q6ZNL6 1462 aa31.69■■■□□ 2.66
SHANK2-220ENST00000608988 KCNH8Q96L42 1107 aa31.68■■■□□ 2.66
SHANK2-220ENST00000608988 DDX10Q13206 875 aaKnown RBP31.65■■■□□ 2.66
SHANK2-220ENST00000608988 CADPSQ9ULU8 1353 aa31.65■■■□□ 2.66
SHANK2-220ENST00000608988 CASKIN1Q8WXD9 1431 aa31.63■■■□□ 2.65
SHANK2-220ENST00000608988 NEFLP07196 543 aa31.61■■■□□ 2.65
SHANK2-220ENST00000608988 FAM50AQ14320 339 aaKnown RBP31.61■■■□□ 2.65
SHANK2-220ENST00000608988 SIN3AQ96ST3 1273 aa31.59■■■□□ 2.65
SHANK2-220ENST00000608988 FKBP8Q14318 412 aa31.59■■■□□ 2.65
SHANK2-220ENST00000608988 ANP32CO43423 234 aa31.57■■■□□ 2.64
SHANK2-220ENST00000608988 CUL7Q14999 1698 aa31.51■■■□□ 2.64
SHANK2-220ENST00000608988 DNAJC5BQ9UF47 199 aa31.48■■■□□ 2.63
SHANK2-220ENST00000608988 CTTNBP2Q8WZ74 1663 aa31.47■■■□□ 2.63
SHANK2-220ENST00000608988 FGD6Q6ZV73 1430 aa31.46■■■□□ 2.63
SHANK2-220ENST00000608988 ABCA10Q8WWZ4 1543 aa31.46■■■□□ 2.63
SHANK2-220ENST00000608988 FMN1Q68DA7 1419 aa31.45■■■□□ 2.63
SHANK2-220ENST00000608988 UACAQ9BZF9 1416 aa31.44■■■□□ 2.62
SHANK2-220ENST00000608988 HFM1A2PYH4 1435 aa31.44■■■□□ 2.62
SHANK2-220ENST00000608988 TONSLQ96HA7 1378 aa31.43■■■□□ 2.62
SHANK2-220ENST00000608988 FHOD3Q2V2M9 1422 aa31.42■■■□□ 2.62
SHANK2-220ENST00000608988 DNMBPQ6XZF7 1577 aa31.42■■■□□ 2.62
SHANK2-220ENST00000608988 CCDC18Q5T9S5 1454 aa31.42■■■□□ 2.62
SHANK2-220ENST00000608988 BCANQ96GW7 911 aa31.4■■■□□ 2.62
SHANK2-220ENST00000608988 PTPN23Q9H3S7 1636 aa31.38■■■□□ 2.61
SHANK2-220ENST00000608988 THOC2Q8NI27 1593 aaKnown RBP31.34■■■□□ 2.61
SHANK2-220ENST00000608988 SNAPC4Q5SXM2 1469 aa31.34■■■□□ 2.61
SHANK2-220ENST00000608988 FANCD2Q9BXW9 1451 aa31.32■■■□□ 2.6
SHANK2-220ENST00000608988 RBM19Q9Y4C8 960 aaKnown RBP31.3■■■□□ 2.6
SHANK2-220ENST00000608988 SAMD9Q5K651 1589 aa31.26■■■□□ 2.59
SHANK2-220ENST00000608988 P3H3Q8IVL6 736 aa31.25■■■□□ 2.59
SHANK2-220ENST00000608988 TRIM52Q96A61 297 aa31.23■■■□□ 2.59
SHANK2-220ENST00000608988 ATP1B4Q9UN42 357 aaPredicted RBP31.23■■■□□ 2.59
SHANK2-220ENST00000608988 NAIPQ13075 1403 aa31.22■■■□□ 2.59
SHANK2-220ENST00000608988 POLA1P09884 1462 aaPredicted RBP31.22■■■□□ 2.59
SHANK2-220ENST00000608988 TOPBP1Q92547 1522 aa31.22■■■□□ 2.59
SHANK2-220ENST00000608988 MTUS2Q5JR59 1369 aa31.22■■■□□ 2.59
SHANK2-220ENST00000608988 MYOM3Q5VTT5 1437 aa31.22■■■□□ 2.59
SHANK2-220ENST00000608988 KDM5BQ9UGL1 1544 aa31.22■■■□□ 2.59
SHANK2-220ENST00000608988 SUPT6HQ7KZ85 1726 aaKnown RBP31.21■■■□□ 2.59
SHANK2-220ENST00000608988 ERICH6BQ5W0A0 696 aa31.21■■■□□ 2.59
SHANK2-220ENST00000608988 EHBP1L1Q8N3D4 1523 aa31.2■■■□□ 2.59
SHANK2-220ENST00000608988 KIF21AQ7Z4S6 1674 aa31.19■■■□□ 2.58
SHANK2-220ENST00000608988 PTPRKQ15262 1439 aa31.18■■■□□ 2.58
SHANK2-220ENST00000608988 GRIN2BQ13224 1484 aa31.17■■■□□ 2.58
SHANK2-220ENST00000608988 RAD54L2Q9Y4B4 1467 aa31.17■■■□□ 2.58
SHANK2-220ENST00000608988 NCOA2Q15596 1464 aa31.16■■■□□ 2.58
SHANK2-220ENST00000608988 HIRIP3Q9BW71 556 aaPredicted RBP31.15■■■□□ 2.58
SHANK2-220ENST00000608988 AKNAQ7Z591 1439 aa31.13■■■□□ 2.57
SHANK2-220ENST00000608988 HECW1Q76N89 1606 aa31.13■■■□□ 2.57
SHANK2-220ENST00000608988 GCC2Q8IWJ2 1684 aa31.12■■■□□ 2.57
SHANK2-220ENST00000608988 ARHGEF11O15085 1522 aa31.11■■■□□ 2.57
SHANK2-220ENST00000608988 LRRIQ1Q96JM4 1722 aa31.11■■■□□ 2.57
SHANK2-220ENST00000608988 TCOF1Q13428 1488 aaKnown RBP31.08■■■□□ 2.57
SHANK2-220ENST00000608988 UGGT2Q9NYU1 1516 aa31.08■■■□□ 2.57
SHANK2-220ENST00000608988 FANCIQ9NVI1 1328 aa31.08■■■□□ 2.57
SHANK2-220ENST00000608988 ABCA5Q8WWZ7 1642 aa31.03■■■□□ 2.56
SHANK2-220ENST00000608988 CDK11AQ9UQ88 783 aaPredicted RBP30.99■■■□□ 2.55
SHANK2-220ENST00000608988 HNRNPUQ00839 825 aaKnown RBP eCLIP30.99■■■□□ 2.55
SHANK2-220ENST00000608988 LAMC3Q9Y6N6 1575 aa30.97■■■□□ 2.55
SHANK2-220ENST00000608988 CNTLNQ9NXG0 1405 aa30.97■■■□□ 2.55
SHANK2-220ENST00000608988 BCL11AQ9H165 835 aa30.94■■■□□ 2.54
SHANK2-220ENST00000608988 NESP48681 1621 aa30.94■■■□□ 2.54
SHANK2-220ENST00000608988 WASHC2AQ641Q2 1341 aa30.93■■■□□ 2.54
SHANK2-220ENST00000608988 HSPA5P11021 654 aaKnown RBP30.91■■■□□ 2.54
SHANK2-220ENST00000608988 EIF4G2P78344 907 aaKnown RBP eCLIP30.91■■■□□ 2.54
SHANK2-220ENST00000608988 MIA2Q96PC5 1412 aa30.88■■■□□ 2.53
SHANK2-220ENST00000608988 PPP4R2Q9NY27 417 aa30.87■■■□□ 2.53
SHANK2-220ENST00000608988 DENND4BO75064 1496 aaPredicted RBP30.87■■■□□ 2.53
SHANK2-220ENST00000608988 NCOA1Q15788 1441 aa30.85■■■□□ 2.53
SHANK2-220ENST00000608988 GAPVD1Q14C86 1478 aa30.85■■■□□ 2.53
SHANK2-220ENST00000608988 MAGI3Q5TCQ9 1506 aa30.83■■■□□ 2.53
SHANK2-220ENST00000608988 MSH5O43196 834 aa30.82■■■□□ 2.53
SHANK2-220ENST00000608988 URB2Q14146 1524 aaKnown RBP30.82■■■□□ 2.52
SHANK2-220ENST00000608988 MYT1LQ9UL68 1186 aa30.8■■■□□ 2.52
SHANK2-220ENST00000608988 POLR1AO95602 1720 aaPredicted RBP30.8■■■□□ 2.52
SHANK2-220ENST00000608988 CCDC7Q96M83 1385 aa30.78■■■□□ 2.52
SHANK2-220ENST00000608988 ZBED9Q6R2W3 1325 aa30.76■■■□□ 2.51
SHANK2-220ENST00000608988 ROCK1Q13464 1354 aa30.73■■■□□ 2.51
SHANK2-220ENST00000608988 PRKRIP1Q9H875 184 aaPredicted RBP30.72■■■□□ 2.51
SHANK2-220ENST00000608988 KDM6BO15054 1643 aa30.71■■■□□ 2.51
SHANK2-220ENST00000608988 ERICH6Q7L0X2 663 aa30.71■■■□□ 2.51
SHANK2-220ENST00000608988 MPHOSPH9Q99550 1183 aa30.71■■■□□ 2.51
SHANK2-220ENST00000608988 RRP7BPQ9NSQ0 103 aa30.7■■■□□ 2.51
SHANK2-220ENST00000608988 RPRD2Q5VT52 1461 aaKnown RBP30.7■■■□□ 2.51
SHANK2-220ENST00000608988 EPRSP07814 1512 aaKnown RBP30.69■■■□□ 2.5
SHANK2-220ENST00000608988 TDRD9Q8NDG6 1382 aaKnown RBP30.67■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms