RNA–Protein interactions for RNA: ENST00000606248.5

MED16-210, Transcript of mediator complex subunit 16, humanhuman

TSL 1 (best)

Gene MED16, Length 3,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED16-210ENST00000606248 MAPKBP1O60336 1514 aa19.98■□□□□ 0.79
MED16-210ENST00000606248 HMGXB3Q12766 1538 aa19.97■□□□□ 0.79
MED16-210ENST00000606248 TRIM52Q96A61 297 aa19.97■□□□□ 0.79
MED16-210ENST00000606248 SETD5Q9C0A6 1442 aa19.96■□□□□ 0.79
MED16-210ENST00000606248 FGD5Q6ZNL6 1462 aa19.95■□□□□ 0.78
MED16-210ENST00000606248 WDR97A6NE52 1622 aa19.94■□□□□ 0.78
MED16-210ENST00000606248 MYT1Q01538 1121 aa19.94■□□□□ 0.78
MED16-210ENST00000606248 FHOD3Q2V2M9 1422 aa19.94■□□□□ 0.78
MED16-210ENST00000606248 FKBP8Q14318 412 aa19.92■□□□□ 0.78
MED16-210ENST00000606248 TIAM1Q13009 1591 aa19.92■□□□□ 0.78
MED16-210ENST00000606248 LRRC9Q6ZRR7 1453 aa19.91■□□□□ 0.78
MED16-210ENST00000606248 TSHZ2Q9NRE2 1034 aa19.91■□□□□ 0.78
MED16-210ENST00000606248 RAD54L2Q9Y4B4 1467 aa19.89■□□□□ 0.78
MED16-210ENST00000606248 CADPSQ9ULU8 1353 aa19.89■□□□□ 0.77
MED16-210ENST00000606248 ARID3CA6NKF2 412 aa19.84■□□□□ 0.77
MED16-210ENST00000606248 PCF11O94913 1555 aaKnown RBP19.81■□□□□ 0.76
MED16-210ENST00000606248 PPP1R15AO75807 674 aaPredicted RBP19.8■□□□□ 0.76
MED16-210ENST00000606248 CHIC2Q9UKJ5 165 aa19.78■□□□□ 0.76
MED16-210ENST00000606248 NESP48681 1621 aa19.76■□□□□ 0.75
MED16-210ENST00000606248 FHAD1B1AJZ9 1412 aa19.75■□□□□ 0.75
MED16-210ENST00000606248 ANP32CO43423 234 aa19.75■□□□□ 0.75
MED16-210ENST00000606248 FANCD2Q9BXW9 1451 aa19.74■□□□□ 0.75
MED16-210ENST00000606248 RRP7BPQ9NSQ0 103 aa19.73■□□□□ 0.75
MED16-210ENST00000606248 IRX6P78412 446 aaPredicted RBP19.72■□□□□ 0.75
MED16-210ENST00000606248 TONSLQ96HA7 1378 aa19.72■□□□□ 0.75
MED16-210ENST00000606248 TDRD9Q8NDG6 1382 aaKnown RBP19.71■□□□□ 0.75
MED16-210ENST00000606248 MTUS2Q5JR59 1369 aa19.7■□□□□ 0.74
MED16-210ENST00000606248 PTPRKQ15262 1439 aa19.68■□□□□ 0.74
MED16-210ENST00000606248 DNAJC5BQ9UF47 199 aa19.67■□□□□ 0.74
MED16-210ENST00000606248 CNGB1Q14028 1251 aaPredicted RBP19.67■□□□□ 0.74
MED16-210ENST00000606248 NEFLP07196 543 aa19.66■□□□□ 0.74
MED16-210ENST00000606248 MAP3K1Q13233 1512 aa19.65■□□□□ 0.74
MED16-210ENST00000606248 POLA1P09884 1462 aaPredicted RBP19.65■□□□□ 0.74
MED16-210ENST00000606248 FOXD1Q16676 465 aa19.65■□□□□ 0.74
MED16-210ENST00000606248 CC2D2AQ9P2K1 1620 aa19.63■□□□□ 0.73
MED16-210ENST00000606248 PRDM2Q13029 1718 aa19.63■□□□□ 0.73
MED16-210ENST00000606248 FGD6Q6ZV73 1430 aa19.62■□□□□ 0.73
MED16-210ENST00000606248 CFAP43Q8NDM7 1665 aa19.61■□□□□ 0.73
MED16-210ENST00000606248 CCDC18Q5T9S5 1454 aa19.61■□□□□ 0.73
MED16-210ENST00000606248 HNRNPUQ00839 825 aaKnown RBP eCLIP19.6■□□□□ 0.733e-7■■□□□ 13.2
MED16-210ENST00000606248 CASKIN1Q8WXD9 1431 aa19.59■□□□□ 0.73
MED16-210ENST00000606248 AQRO60306 1485 aaKnown RBP eCLIP19.59■□□□□ 0.731e-6■■■■□ 25.8
MED16-210ENST00000606248 TOPBP1Q92547 1522 aa19.59■□□□□ 0.73
MED16-210ENST00000606248 FYCO1Q9BQS8 1478 aa19.57■□□□□ 0.72
MED16-210ENST00000606248 SENP3-EIF4A1A0A087X0R7 540 aa19.54■□□□□ 0.72
MED16-210ENST00000606248 TIMELESSQ9UNS1 1208 aa19.54■□□□□ 0.72
MED16-210ENST00000606248 CCDC184Q52MB2 194 aa19.53■□□□□ 0.72
MED16-210ENST00000606248 CCER2I3L3R5 266 aa19.52■□□□□ 0.72
MED16-210ENST00000606248 RBM19Q9Y4C8 960 aaKnown RBP19.52■□□□□ 0.72
MED16-210ENST00000606248 ABCA10Q8WWZ4 1543 aa19.52■□□□□ 0.72
MED16-210ENST00000606248 HSPA5P11021 654 aaKnown RBP19.52■□□□□ 0.72
MED16-210ENST00000606248 ANP32EQ9BTT0 268 aa19.52■□□□□ 0.72
MED16-210ENST00000606248 FMN1Q68DA7 1419 aa19.51■□□□□ 0.71
MED16-210ENST00000606248 NCOA2Q15596 1464 aa19.5■□□□□ 0.71
MED16-210ENST00000606248 DNMBPQ6XZF7 1577 aa19.5■□□□□ 0.71
MED16-210ENST00000606248 NAIPQ13075 1403 aa19.49■□□□□ 0.71
MED16-210ENST00000606248 SNAPC4Q5SXM2 1469 aa19.48■□□□□ 0.71
MED16-210ENST00000606248 UACAQ9BZF9 1416 aa19.47■□□□□ 0.71
MED16-210ENST00000606248 WASHC2AQ641Q2 1341 aa19.47■□□□□ 0.71
MED16-210ENST00000606248 FAM9BQ8IZU0 186 aa19.46■□□□□ 0.71
MED16-210ENST00000606248 HFM1A2PYH4 1435 aa19.46■□□□□ 0.71
MED16-210ENST00000606248 PTPN23Q9H3S7 1636 aa19.45■□□□□ 0.7
MED16-210ENST00000606248 C11orf95C9JLR9 678 aaPredicted RBP19.44■□□□□ 0.7
MED16-210ENST00000606248 URB2Q14146 1524 aaKnown RBP19.44■□□□□ 0.7
MED16-210ENST00000606248 LRRIQ1Q96JM4 1722 aa19.44■□□□□ 0.7
MED16-210ENST00000606248 POLR3GLQ9BT43 218 aa19.44■□□□□ 0.7
MED16-210ENST00000606248 EFCAB5A4FU69 1503 aa19.44■□□□□ 0.7
MED16-210ENST00000606248 MYOM3Q5VTT5 1437 aa19.44■□□□□ 0.7
MED16-210ENST00000606248 CTTNBP2Q8WZ74 1663 aa19.43■□□□□ 0.7
MED16-210ENST00000606248 L3MBTL2Q969R5 705 aa19.42■□□□□ 0.7
MED16-210ENST00000606248 GAPVD1Q14C86 1478 aa19.4■□□□□ 0.7
MED16-210ENST00000606248 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.4■□□□□ 0.76e-7■■■■□ 25.6
MED16-210ENST00000606248 MPHOSPH9Q99550 1183 aa19.39■□□□□ 0.69
MED16-210ENST00000606248 MAGI3Q5TCQ9 1506 aa19.39■□□□□ 0.69
MED16-210ENST00000606248 ZNF644Q9H582 1327 aaPredicted RBP19.38■□□□□ 0.69
MED16-210ENST00000606248 EIF4G2P78344 907 aaKnown RBP eCLIP19.37■□□□□ 0.69
MED16-210ENST00000606248 ZNF326Q5BKZ1 582 aaKnown RBP19.37■□□□□ 0.69
MED16-210ENST00000606248 KDM6BO15054 1643 aa19.36■□□□□ 0.69
MED16-210ENST00000606248 CUL7Q14999 1698 aa19.36■□□□□ 0.69
MED16-210ENST00000606248 GRIN2BQ13224 1484 aa19.35■□□□□ 0.69
MED16-210ENST00000606248 NBPF8Q3BBV2 869 aa19.33■□□□□ 0.69
MED16-210ENST00000606248 CDK13Q14004 1512 aaKnown RBP19.33■□□□□ 0.68
MED16-210ENST00000606248 KDM5BQ9UGL1 1544 aa19.33■□□□□ 0.68
MED16-210ENST00000606248 MRS2Q9HD23 443 aa19.32■□□□□ 0.68
MED16-210ENST00000606248 MSH5O43196 834 aa19.32■□□□□ 0.68
MED16-210ENST00000606248 DENND4BO75064 1496 aaPredicted RBP19.31■□□□□ 0.68
MED16-210ENST00000606248 SUPT6HQ7KZ85 1726 aaKnown RBP19.3■□□□□ 0.68
MED16-210ENST00000606248 B4GALNT3Q6L9W6 998 aa19.29■□□□□ 0.68
MED16-210ENST00000606248 ZNF777Q9ULD5 760 aaPredicted RBP19.28■□□□□ 0.68
MED16-210ENST00000606248 SLC4A1APQ9BWU0 796 aaKnown RBP19.27■□□□□ 0.68
MED16-210ENST00000606248 SAMD9Q5K651 1589 aa19.26■□□□□ 0.67
MED16-210ENST00000606248 UGGT2Q9NYU1 1516 aa19.25■□□□□ 0.67
MED16-210ENST00000606248 PRKRIP1Q9H875 184 aaPredicted RBP19.25■□□□□ 0.67
MED16-210ENST00000606248 CDK11AQ9UQ88 783 aaPredicted RBP19.24■□□□□ 0.67
MED16-210ENST00000606248 EHBP1L1Q8N3D4 1523 aa19.24■□□□□ 0.67
MED16-210ENST00000606248 BCL11AQ9H165 835 aa19.24■□□□□ 0.67
MED16-210ENST00000606248 LAMC3Q9Y6N6 1575 aa19.22■□□□□ 0.67
MED16-210ENST00000606248 ABCA5Q8WWZ7 1642 aa19.21■□□□□ 0.67
MED16-210ENST00000606248 PDS5BQ9NTI5 1447 aa19.21■□□□□ 0.67
MED16-210ENST00000606248 EPRSP07814 1512 aaKnown RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms