RNA–Protein interactions for RNA: ENST00000605881.5

TRIM49D1-203, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM49D1, Length 1,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-203ENST00000605881 RNF216Q9NWF9 866 aaPredicted RBP12.23□□□□□ -0.45
TRIM49D1-203ENST00000605881 CNKSR2Q8WXI2 1034 aa12.2□□□□□ -0.46
TRIM49D1-203ENST00000605881 CUX1P39880 1505 aa12.19□□□□□ -0.46
TRIM49D1-203ENST00000605881 NPM1P06748 294 aaKnown RBP eCLIP12.14□□□□□ -0.47
TRIM49D1-203ENST00000605881 ABCA10Q8WWZ4 1543 aa12.13□□□□□ -0.47
TRIM49D1-203ENST00000605881 GRIN2AQ12879 1464 aa12.13□□□□□ -0.47
TRIM49D1-203ENST00000605881 PBRM1Q86U86 1689 aa12.12□□□□□ -0.47
TRIM49D1-203ENST00000605881 WRNQ14191 1432 aaPredicted RBP eCLIP12.1□□□□□ -0.47
TRIM49D1-203ENST00000605881 NUP160Q12769 1436 aa12.09□□□□□ -0.47
TRIM49D1-203ENST00000605881 FAM69CQ0P6D2 419 aa12.09□□□□□ -0.47
TRIM49D1-203ENST00000605881 CEP170Q5SW79 1584 aa12.08□□□□□ -0.48
TRIM49D1-203ENST00000605881 FHAD1B1AJZ9 1412 aa12.08□□□□□ -0.48
TRIM49D1-203ENST00000605881 ABCA5Q8WWZ7 1642 aa12.07□□□□□ -0.48
TRIM49D1-203ENST00000605881 ERCC6L2Q5T890 1561 aa12.07□□□□□ -0.48
TRIM49D1-203ENST00000605881 JPH4Q96JJ6 628 aa12.07□□□□□ -0.48
TRIM49D1-203ENST00000605881 PRG4Q92954 1404 aaPredicted RBP12.05□□□□□ -0.48
TRIM49D1-203ENST00000605881 ADAMTS12P58397 1594 aa12.02□□□□□ -0.48
TRIM49D1-203ENST00000605881 ABCC10Q5T3U5 1492 aa12□□□□□ -0.49
TRIM49D1-203ENST00000605881 POTEHQ6S545 545 aa12□□□□□ -0.49
TRIM49D1-203ENST00000605881 SHROOM2Q13796 1616 aa12□□□□□ -0.49
TRIM49D1-203ENST00000605881 ERICH3Q5RHP9 1530 aa11.98□□□□□ -0.49
TRIM49D1-203ENST00000605881 KDM4FA0A1W2PPD8 638 aa11.97□□□□□ -0.49
TRIM49D1-203ENST00000605881 SUPT5HO00267 1087 aaKnown RBP11.96□□□□□ -0.49
TRIM49D1-203ENST00000605881 KIF13AQ9H1H9 1805 aa11.95□□□□□ -0.5
TRIM49D1-203ENST00000605881 ILDR1Q86SU0 546 aaPredicted RBP11.94□□□□□ -0.5
TRIM49D1-203ENST00000605881 MAPKBP1O60336 1514 aa11.94□□□□□ -0.5
TRIM49D1-203ENST00000605881 TOP2BQ02880 1626 aa11.92□□□□□ -0.5
TRIM49D1-203ENST00000605881 KDM6BO15054 1643 aa11.91□□□□□ -0.5
TRIM49D1-203ENST00000605881 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.9□□□□□ -0.5
TRIM49D1-203ENST00000605881 DIP2BQ9P265 1576 aa11.89□□□□□ -0.51
TRIM49D1-203ENST00000605881 BIVM-ERCC5R4GMW8 1640 aa11.89□□□□□ -0.51
TRIM49D1-203ENST00000605881 KIAA0586Q9BVV6 1533 aa11.86□□□□□ -0.51
TRIM49D1-203ENST00000605881 PTPRGP23470 1445 aa11.86□□□□□ -0.51
TRIM49D1-203ENST00000605881 TTBK1Q5TCY1 1321 aaPredicted RBP11.86□□□□□ -0.51
TRIM49D1-203ENST00000605881 RUSC2Q8N2Y8 1516 aa11.85□□□□□ -0.51
TRIM49D1-203ENST00000605881 ADCY10Q96PN6 1610 aa11.84□□□□□ -0.51
TRIM49D1-203ENST00000605881 CARMIL2Q6F5E8 1435 aa11.82□□□□□ -0.52
TRIM49D1-203ENST00000605881 PLB1Q6P1J6 1458 aa11.8□□□□□ -0.52
TRIM49D1-203ENST00000605881 IGF1RP08069 1367 aa11.8□□□□□ -0.52
TRIM49D1-203ENST00000605881 TNIKQ9UKE5 1360 aa11.8□□□□□ -0.52
TRIM49D1-203ENST00000605881 TSPOAP1O95153 1857 aa11.79□□□□□ -0.52
TRIM49D1-203ENST00000605881 KIF27Q86VH2 1401 aa11.78□□□□□ -0.52
TRIM49D1-203ENST00000605881 ASXL2Q76L83 1435 aa11.78□□□□□ -0.52
TRIM49D1-203ENST00000605881 ADGRL1O94910 1474 aa11.77□□□□□ -0.53
TRIM49D1-203ENST00000605881 ABCC2Q92887 1545 aa11.77□□□□□ -0.53
TRIM49D1-203ENST00000605881 CARMIL1Q5VZK9 1371 aa11.74□□□□□ -0.53
TRIM49D1-203ENST00000605881 GLI2P10070 1586 aa11.73□□□□□ -0.53
TRIM49D1-203ENST00000605881 TEX14Q8IWB6 1497 aa11.73□□□□□ -0.53
TRIM49D1-203ENST00000605881 UACAQ9BZF9 1416 aa11.73□□□□□ -0.53
TRIM49D1-203ENST00000605881 CUL7Q14999 1698 aa11.73□□□□□ -0.53
TRIM49D1-203ENST00000605881 UHRF1BP1LA0JNW5 1464 aa11.72□□□□□ -0.53
TRIM49D1-203ENST00000605881 NCBP3Q53F19 620 aaKnown RBP11.69□□□□□ -0.54
TRIM49D1-203ENST00000605881 EPRSP07814 1512 aaKnown RBP11.68□□□□□ -0.54
TRIM49D1-203ENST00000605881 HECW2Q9P2P5 1572 aa11.68□□□□□ -0.54
TRIM49D1-203ENST00000605881 COL17A1Q9UMD9 1497 aaPredicted RBP11.66□□□□□ -0.54
TRIM49D1-203ENST00000605881 FAM9AQ8IZU1 332 aaPredicted RBP11.66□□□□□ -0.54
TRIM49D1-203ENST00000605881 FBXO41Q8TF61 875 aa11.66□□□□□ -0.54
TRIM49D1-203ENST00000605881 IQGAP2Q13576 1575 aa11.65□□□□□ -0.54
TRIM49D1-203ENST00000605881 KDM5BQ9UGL1 1544 aa11.65□□□□□ -0.54
TRIM49D1-203ENST00000605881 PPRC1Q5VV67 1664 aaKnown RBP11.64□□□□□ -0.55
TRIM49D1-203ENST00000605881 DSG3P32926 999 aa11.63□□□□□ -0.55
TRIM49D1-203ENST00000605881 KCNH8Q96L42 1107 aa11.62□□□□□ -0.55
TRIM49D1-203ENST00000605881 MAP3K4Q9Y6R4 1608 aa11.61□□□□□ -0.55
TRIM49D1-203ENST00000605881 DISP1Q96F81 1524 aa11.61□□□□□ -0.55
TRIM49D1-203ENST00000605881 CD109Q6YHK3 1445 aa11.61□□□□□ -0.55
TRIM49D1-203ENST00000605881 WDR7Q9Y4E6 1490 aa11.6□□□□□ -0.55
TRIM49D1-203ENST00000605881 CAPN15O75808 1086 aa11.59□□□□□ -0.55
TRIM49D1-203ENST00000605881 MAGI3Q5TCQ9 1506 aa11.57□□□□□ -0.56
TRIM49D1-203ENST00000605881 UGGT2Q9NYU1 1516 aa11.57□□□□□ -0.56
TRIM49D1-203ENST00000605881 RAPGEF2Q9Y4G8 1499 aa11.57□□□□□ -0.56
TRIM49D1-203ENST00000605881 ZCCHC11Q5TAX3 1644 aaKnown RBP11.57□□□□□ -0.56
TRIM49D1-203ENST00000605881 SPINK5Q9NQ38 1064 aaPredicted RBP11.57□□□□□ -0.56
TRIM49D1-203ENST00000605881 U3KPZ7 1027 aaPredicted RBP11.57□□□□□ -0.56
TRIM49D1-203ENST00000605881 GOLGA3Q08378 1498 aa11.53□□□□□ -0.56
TRIM49D1-203ENST00000605881 KIAA0556O60303 1618 aa11.53□□□□□ -0.56
TRIM49D1-203ENST00000605881 PHLDB1Q86UU1 1377 aa11.52□□□□□ -0.56
TRIM49D1-203ENST00000605881 ARID4BQ4LE39 1312 aaPredicted RBP11.51□□□□□ -0.57
TRIM49D1-203ENST00000605881 CFAP43Q8NDM7 1665 aa11.5□□□□□ -0.57
TRIM49D1-203ENST00000605881 NPM3O75607 178 aaKnown RBP11.49□□□□□ -0.57
TRIM49D1-203ENST00000605881 ARAP3Q8WWN8 1544 aa11.48□□□□□ -0.57
TRIM49D1-203ENST00000605881 PTPRMP28827 1452 aa11.48□□□□□ -0.57
TRIM49D1-203ENST00000605881 ARID3CA6NKF2 412 aa11.46□□□□□ -0.57
TRIM49D1-203ENST00000605881 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.46□□□□□ -0.57
TRIM49D1-203ENST00000605881 HNRNPUL2Q1KMD3 747 aaKnown RBP11.46□□□□□ -0.57
TRIM49D1-203ENST00000605881 RAPGEF3O95398 923 aa11.45□□□□□ -0.58
TRIM49D1-203ENST00000605881 KIF21BO75037 1637 aa11.45□□□□□ -0.58
TRIM49D1-203ENST00000605881 ABCA8O94911 1581 aa11.44□□□□□ -0.58
TRIM49D1-203ENST00000605881 P3H3Q8IVL6 736 aa11.42□□□□□ -0.58
TRIM49D1-203ENST00000605881 NEO1Q92859 1461 aa11.41□□□□□ -0.58
TRIM49D1-203ENST00000605881 ATP10BO94823 1461 aa11.4□□□□□ -0.58
TRIM49D1-203ENST00000605881 LMTK3Q96Q04 1460 aa11.4□□□□□ -0.58
TRIM49D1-203ENST00000605881 PCF11O94913 1555 aaKnown RBP11.39□□□□□ -0.59
TRIM49D1-203ENST00000605881 CERKQ8TCT0 537 aa11.39□□□□□ -0.59
TRIM49D1-203ENST00000605881 ADAMTSL3P82987 1691 aa11.39□□□□□ -0.59
TRIM49D1-203ENST00000605881 POGZQ7Z3K3 1410 aa11.38□□□□□ -0.59
TRIM49D1-203ENST00000605881 HSPA2P54652 639 aa11.37□□□□□ -0.59
TRIM49D1-203ENST00000605881 CTTNBP2Q8WZ74 1663 aa11.37□□□□□ -0.59
TRIM49D1-203ENST00000605881 PLEKHD1A6NEE1 506 aa11.36□□□□□ -0.59
TRIM49D1-203ENST00000605881 ABCA9Q8IUA7 1624 aa11.35□□□□□ -0.59
TRIM49D1-203ENST00000605881 DENND4BO75064 1496 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms