RNA–Protein interactions for RNA: ENST00000605881.5

TRIM49D1-203, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM49D1, Length 1,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-203ENST00000605881 AEBP2Q6ZN18 517 aaPredicted RBP19.48■□□□□ 0.71
TRIM49D1-203ENST00000605881 CHIC1Q5VXU3 224 aa18.23■□□□□ 0.51
TRIM49D1-203ENST00000605881 NISCHQ9Y2I1 1504 aa16.86■□□□□ 0.29
TRIM49D1-203ENST00000605881 SENP3Q9H4L4 574 aaPredicted RBP16.74■□□□□ 0.27
TRIM49D1-203ENST00000605881 PHF23Q9BUL5 403 aaPredicted RBP16.41■□□□□ 0.22
TRIM49D1-203ENST00000605881 FOXD1Q16676 465 aa15.63■□□□□ 0.09
TRIM49D1-203ENST00000605881 ABCC9O60706 1549 aa15.57■□□□□ 0.08
TRIM49D1-203ENST00000605881 POTEDQ86YR6 584 aa15.43■□□□□ 0.06
TRIM49D1-203ENST00000605881 CCDC180Q9P1Z9 1646 aa15.2■□□□□ 0.02
TRIM49D1-203ENST00000605881 MSH5O43196 834 aa14.88□□□□□ -0.03
TRIM49D1-203ENST00000605881 DNAJC5BQ9UF47 199 aa14.85□□□□□ -0.03
TRIM49D1-203ENST00000605881 RB1CC1Q8TDY2 1594 aa14.69□□□□□ -0.06
TRIM49D1-203ENST00000605881 DCAF8L2P0C7V8 631 aa14.54□□□□□ -0.08
TRIM49D1-203ENST00000605881 NACADO15069 1562 aa14.52□□□□□ -0.09
TRIM49D1-203ENST00000605881 PABPN1Q86U42 306 aaKnown RBP eCLIP14.5□□□□□ -0.09
TRIM49D1-203ENST00000605881 PIAS4Q8N2W9 510 aaPredicted RBP14.5□□□□□ -0.09
TRIM49D1-203ENST00000605881 MYO15BQ96JP2 1530 aa14.21□□□□□ -0.13
TRIM49D1-203ENST00000605881 PPP6R1Q9UPN7 881 aa14.19□□□□□ -0.14
TRIM49D1-203ENST00000605881 BICRAQ9NZM4 1560 aa14.17□□□□□ -0.14
TRIM49D1-203ENST00000605881 UNC13AQ9UPW8 1703 aa14.17□□□□□ -0.14
TRIM49D1-203ENST00000605881 PLPPR3Q6T4P5 718 aa14.13□□□□□ -0.15
TRIM49D1-203ENST00000605881 ADRA2BP18089 450 aa14.12□□□□□ -0.15
TRIM49D1-203ENST00000605881 CECR2Q9BXF3 1484 aa14.08□□□□□ -0.16
TRIM49D1-203ENST00000605881 SHROOM4Q9ULL8 1493 aa14.06□□□□□ -0.16
TRIM49D1-203ENST00000605881 CC2D2AQ9P2K1 1620 aa14□□□□□ -0.17
TRIM49D1-203ENST00000605881 DNAJC5Q9H3Z4 198 aa13.94□□□□□ -0.18
TRIM49D1-203ENST00000605881 DCAF1Q9Y4B6 1507 aa13.91□□□□□ -0.18
TRIM49D1-203ENST00000605881 EIF4G1Q04637 1599 aaKnown RBP13.91□□□□□ -0.18
TRIM49D1-203ENST00000605881 ZCCHC6Q5VYS8 1495 aaKnown RBP13.88□□□□□ -0.19
TRIM49D1-203ENST00000605881 SCRIBQ14160 1630 aa13.85□□□□□ -0.19
TRIM49D1-203ENST00000605881 CUX2O14529 1486 aa13.57□□□□□ -0.24
TRIM49D1-203ENST00000605881 ERCC6Q03468 1493 aa13.53□□□□□ -0.24
TRIM49D1-203ENST00000605881 NCAPD3P42695 1498 aa13.42□□□□□ -0.26
TRIM49D1-203ENST00000605881 ATAD2BQ9ULI0 1458 aa13.32□□□□□ -0.28
TRIM49D1-203ENST00000605881 SMARCA2P51531 1590 aa13.28□□□□□ -0.28
TRIM49D1-203ENST00000605881 HMGXB3Q12766 1538 aa13.25□□□□□ -0.29
TRIM49D1-203ENST00000605881 NESP48681 1621 aa13.25□□□□□ -0.29
TRIM49D1-203ENST00000605881 TRIM41Q8WV44 630 aa13.24□□□□□ -0.29
TRIM49D1-203ENST00000605881 BAZ1BQ9UIG0 1483 aaKnown RBP13.2□□□□□ -0.3
TRIM49D1-203ENST00000605881 SMARCA4P51532 1647 aa13.18□□□□□ -0.3
TRIM49D1-203ENST00000605881 DMRT2Q9Y5R5 561 aa13.17□□□□□ -0.3
TRIM49D1-203ENST00000605881 PDS5BQ9NTI5 1447 aa13.16□□□□□ -0.3
TRIM49D1-203ENST00000605881 LAMC3Q9Y6N6 1575 aa13.14□□□□□ -0.31
TRIM49D1-203ENST00000605881 MAPK8IP2Q13387 824 aaPredicted RBP13.13□□□□□ -0.31
TRIM49D1-203ENST00000605881 BAZ1AQ9NRL2 1556 aaPredicted RBP13.12□□□□□ -0.31
TRIM49D1-203ENST00000605881 THOC2Q8NI27 1593 aaKnown RBP13.12□□□□□ -0.31
TRIM49D1-203ENST00000605881 CACNB1Q02641 598 aaPredicted RBP13.1□□□□□ -0.31
TRIM49D1-203ENST00000605881 PEG3Q9GZU2 1588 aa13.05□□□□□ -0.32
TRIM49D1-203ENST00000605881 CADPSQ9ULU8 1353 aa13.03□□□□□ -0.32
TRIM49D1-203ENST00000605881 MRC2Q9UBG0 1479 aa13□□□□□ -0.33
TRIM49D1-203ENST00000605881 KIF21AQ7Z4S6 1674 aa12.99□□□□□ -0.33
TRIM49D1-203ENST00000605881 OSCARQ8IYS5 282 aa12.99□□□□□ -0.33
TRIM49D1-203ENST00000605881 MROH2BQ7Z745 1585 aa12.96□□□□□ -0.34
TRIM49D1-203ENST00000605881 SCAF1Q9H7N4 1312 aaKnown RBP12.95□□□□□ -0.34
TRIM49D1-203ENST00000605881 WDR62O43379 1518 aa12.93□□□□□ -0.34
TRIM49D1-203ENST00000605881 CEP164Q9UPV0 1460 aa12.9□□□□□ -0.34
TRIM49D1-203ENST00000605881 FANCD2Q9BXW9 1451 aa12.85□□□□□ -0.35
TRIM49D1-203ENST00000605881 CFTRP13569 1480 aa12.78□□□□□ -0.36
TRIM49D1-203ENST00000605881 WIZO95785 1651 aa12.76□□□□□ -0.37
TRIM49D1-203ENST00000605881 URB2Q14146 1524 aaKnown RBP12.72□□□□□ -0.37
TRIM49D1-203ENST00000605881 TRHP20396 242 aaPredicted RBP12.71□□□□□ -0.38
TRIM49D1-203ENST00000605881 CYB5RLQ6IPT4 315 aa12.69□□□□□ -0.38
TRIM49D1-203ENST00000605881 RIMBP3CA6NJZ7 1639 aa12.69□□□□□ -0.38
TRIM49D1-203ENST00000605881 RIMBP3BA6NNM3 1639 aa12.69□□□□□ -0.38
TRIM49D1-203ENST00000605881 RIMBP3Q9UFD9 1639 aa12.69□□□□□ -0.38
TRIM49D1-203ENST00000605881 DCAF8L1A6NGE4 600 aa12.68□□□□□ -0.38
TRIM49D1-203ENST00000605881 IFT140Q96RY7 1462 aa12.67□□□□□ -0.38
TRIM49D1-203ENST00000605881 ARHGEF11O15085 1522 aa12.65□□□□□ -0.38
TRIM49D1-203ENST00000605881 RNF39Q9H2S5 420 aa12.63□□□□□ -0.39
TRIM49D1-203ENST00000605881 TOP2AP11388 1531 aaKnown RBP12.63□□□□□ -0.39
TRIM49D1-203ENST00000605881 RSF1Q96T23 1441 aaPredicted RBP12.62□□□□□ -0.39
TRIM49D1-203ENST00000605881 ZNF608Q9ULD9 1512 aaPredicted RBP12.61□□□□□ -0.39
TRIM49D1-203ENST00000605881 FBLN2P98095 1184 aa12.6□□□□□ -0.39
TRIM49D1-203ENST00000605881 ABCC8Q09428 1581 aa12.58□□□□□ -0.4
TRIM49D1-203ENST00000605881 TOPBP1Q92547 1522 aa12.54□□□□□ -0.4
TRIM49D1-203ENST00000605881 CCDC88BA6NC98 1476 aa12.51□□□□□ -0.41
TRIM49D1-203ENST00000605881 AQRO60306 1485 aaKnown RBP eCLIP12.51□□□□□ -0.41
TRIM49D1-203ENST00000605881 ARAP1Q96P48 1450 aa12.5□□□□□ -0.41
TRIM49D1-203ENST00000605881 EIF4G3O43432 1585 aaKnown RBP12.49□□□□□ -0.41
TRIM49D1-203ENST00000605881 PRDM2Q13029 1718 aa12.49□□□□□ -0.41
TRIM49D1-203ENST00000605881 DNMBPQ6XZF7 1577 aa12.47□□□□□ -0.41
TRIM49D1-203ENST00000605881 HOXD11P31277 338 aaPredicted RBP12.46□□□□□ -0.41
TRIM49D1-203ENST00000605881 CHMP7Q8WUX9 453 aaPredicted RBP12.46□□□□□ -0.41
TRIM49D1-203ENST00000605881 CHD1O14646 1710 aa12.42□□□□□ -0.42
TRIM49D1-203ENST00000605881 C1QBPQ07021 282 aaKnown RBP12.42□□□□□ -0.42
TRIM49D1-203ENST00000605881 SOGA1O94964 1423 aa12.42□□□□□ -0.42
TRIM49D1-203ENST00000605881 TDRD9Q8NDG6 1382 aaKnown RBP12.41□□□□□ -0.42
TRIM49D1-203ENST00000605881 POLA1P09884 1462 aaPredicted RBP12.4□□□□□ -0.42
TRIM49D1-203ENST00000605881 TARBP1Q13395 1621 aaKnown RBP12.4□□□□□ -0.42
TRIM49D1-203ENST00000605881 RAD54L2Q9Y4B4 1467 aa12.37□□□□□ -0.43
TRIM49D1-203ENST00000605881 SNAPC4Q5SXM2 1469 aa12.36□□□□□ -0.43
TRIM49D1-203ENST00000605881 SYNJ1O43426 1573 aa12.35□□□□□ -0.43
TRIM49D1-203ENST00000605881 MAGI1Q96QZ7 1491 aaPredicted RBP12.34□□□□□ -0.43
TRIM49D1-203ENST00000605881 GRIN2BQ13224 1484 aa12.32□□□□□ -0.44
TRIM49D1-203ENST00000605881 CLASP1Q7Z460 1538 aa12.32□□□□□ -0.44
TRIM49D1-203ENST00000605881 WDR97A6NE52 1622 aa12.31□□□□□ -0.44
TRIM49D1-203ENST00000605881 PPP4R3CPQ6ZMV5 832 aa12.3□□□□□ -0.44
TRIM49D1-203ENST00000605881 SYNJ2O15056 1496 aa12.3□□□□□ -0.44
TRIM49D1-203ENST00000605881 FGD5Q6ZNL6 1462 aa12.29□□□□□ -0.44
TRIM49D1-203ENST00000605881 GAPVD1Q14C86 1478 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms