RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 EHMT2Q96KQ7 1210 aa20.66■□□□□ 0.9
CHMP2A-206ENST00000600118 UBTFP17480 764 aaKnown RBP20.64■□□□□ 0.89
CHMP2A-206ENST00000600118 IQGAP2Q13576 1575 aa20.63■□□□□ 0.89
CHMP2A-206ENST00000600118 LOC105371045A0A1W2PR82 267 aa20.62■□□□□ 0.89
CHMP2A-206ENST00000600118 JPH4Q96JJ6 628 aa20.61■□□□□ 0.89
CHMP2A-206ENST00000600118 CTTNBP2Q8WZ74 1663 aa20.61■□□□□ 0.89
CHMP2A-206ENST00000600118 TNIKQ9UKE5 1360 aa20.6■□□□□ 0.89
CHMP2A-206ENST00000600118 SHROOM2Q13796 1616 aa20.6■□□□□ 0.89
CHMP2A-206ENST00000600118 UGGT2Q9NYU1 1516 aa20.58■□□□□ 0.88
CHMP2A-206ENST00000600118 PRG4Q92954 1404 aaPredicted RBP20.53■□□□□ 0.88
CHMP2A-206ENST00000600118 DNAJC5Q9H3Z4 198 aa20.52■□□□□ 0.88
CHMP2A-206ENST00000600118 DISP1Q96F81 1524 aa20.5■□□□□ 0.87
CHMP2A-206ENST00000600118 ERCC6L2Q5T890 1561 aa20.48■□□□□ 0.87
CHMP2A-206ENST00000600118 ARHGEF11O15085 1522 aa20.48■□□□□ 0.87
CHMP2A-206ENST00000600118 CARMIL2Q6F5E8 1435 aa20.46■□□□□ 0.87
CHMP2A-206ENST00000600118 SAMD9Q5K651 1589 aa20.45■□□□□ 0.86
CHMP2A-206ENST00000600118 EFCAB5A4FU69 1503 aa20.43■□□□□ 0.86
CHMP2A-206ENST00000600118 KIAA0556O60303 1618 aa20.43■□□□□ 0.86
CHMP2A-206ENST00000600118 RANGAP1P46060 587 aaPredicted RBP20.42■□□□□ 0.86
CHMP2A-206ENST00000600118 ARHGAP35Q9NRY4 1499 aa20.42■□□□□ 0.86
CHMP2A-206ENST00000600118 CLIP1P30622 1438 aa20.41■□□□□ 0.86
CHMP2A-206ENST00000600118 CEP162Q5TB80 1403 aa20.41■□□□□ 0.86
CHMP2A-206ENST00000600118 RIMBP3CA6NJZ7 1639 aa20.4■□□□□ 0.86
CHMP2A-206ENST00000600118 RIMBP3BA6NNM3 1639 aa20.4■□□□□ 0.86
CHMP2A-206ENST00000600118 RIMBP3Q9UFD9 1639 aa20.4■□□□□ 0.86
CHMP2A-206ENST00000600118 P3H3Q8IVL6 736 aa20.36■□□□□ 0.85
CHMP2A-206ENST00000600118 ARAP1Q96P48 1450 aa20.36■□□□□ 0.85
CHMP2A-206ENST00000600118 PTPRGP23470 1445 aa20.35■□□□□ 0.85
CHMP2A-206ENST00000600118 FHOD3Q2V2M9 1422 aa20.35■□□□□ 0.85
CHMP2A-206ENST00000600118 CYB5RLQ6IPT4 315 aa20.25■□□□□ 0.83
CHMP2A-206ENST00000600118 TTBK1Q5TCY1 1321 aaPredicted RBP20.25■□□□□ 0.83
CHMP2A-206ENST00000600118 FMN1Q68DA7 1419 aa20.24■□□□□ 0.83
CHMP2A-206ENST00000600118 UACAQ9BZF9 1416 aa20.22■□□□□ 0.83
CHMP2A-206ENST00000600118 PLB1Q6P1J6 1458 aa20.22■□□□□ 0.83
CHMP2A-206ENST00000600118 ABCA8O94911 1581 aa20.21■□□□□ 0.83
CHMP2A-206ENST00000600118 UHRF1BP1LA0JNW5 1464 aa20.2■□□□□ 0.82
CHMP2A-206ENST00000600118 AEBP2Q6ZN18 517 aaPredicted RBP20.19■□□□□ 0.82
CHMP2A-206ENST00000600118 ABCC2Q92887 1545 aa20.17■□□□□ 0.82
CHMP2A-206ENST00000600118 VPS8Q8N3P4 1428 aa20.15■□□□□ 0.82
CHMP2A-206ENST00000600118 CASKIN1Q8WXD9 1431 aa20.15■□□□□ 0.82
CHMP2A-206ENST00000600118 RAPGEF6Q8TEU7 1601 aa20.14■□□□□ 0.81
CHMP2A-206ENST00000600118 ADCY10Q96PN6 1610 aa20.14■□□□□ 0.81
CHMP2A-206ENST00000600118 NUP153P49790 1475 aaKnown RBP20.12■□□□□ 0.81
CHMP2A-206ENST00000600118 PCF11O94913 1555 aaKnown RBP20.1■□□□□ 0.81
CHMP2A-206ENST00000600118 KDM5BQ9UGL1 1544 aa20.1■□□□□ 0.81
CHMP2A-206ENST00000600118 FYCO1Q9BQS8 1478 aa20.1■□□□□ 0.81
CHMP2A-206ENST00000600118 ATP10BO94823 1461 aa20.06■□□□□ 0.8
CHMP2A-206ENST00000600118 HECW1Q76N89 1606 aa20.06■□□□□ 0.8
CHMP2A-206ENST00000600118 EPRSP07814 1512 aaKnown RBP20.04■□□□□ 0.8
CHMP2A-206ENST00000600118 ATP1B4Q9UN42 357 aaPredicted RBP20.02■□□□□ 0.8
CHMP2A-206ENST00000600118 NPM1P06748 294 aaKnown RBP eCLIP20.01■□□□□ 0.79
CHMP2A-206ENST00000600118 ARID3CA6NKF2 412 aa20■□□□□ 0.79
CHMP2A-206ENST00000600118 CCDC18Q5T9S5 1454 aa19.99■□□□□ 0.79
CHMP2A-206ENST00000600118 ZCCHC11Q5TAX3 1644 aaKnown RBP19.99■□□□□ 0.79
CHMP2A-206ENST00000600118 CDK13Q14004 1512 aaKnown RBP19.99■□□□□ 0.79
CHMP2A-206ENST00000600118 MAPKBP1O60336 1514 aa19.97■□□□□ 0.79
CHMP2A-206ENST00000600118 LRRIQ1Q96JM4 1722 aa19.96■□□□□ 0.79
CHMP2A-206ENST00000600118 ASXL2Q76L83 1435 aa19.94■□□□□ 0.78
CHMP2A-206ENST00000600118 MAP3K1Q13233 1512 aa19.94■□□□□ 0.78
CHMP2A-206ENST00000600118 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.92■□□□□ 0.78
CHMP2A-206ENST00000600118 HNRNPUL2Q1KMD3 747 aaKnown RBP19.92■□□□□ 0.78
CHMP2A-206ENST00000600118 WDR7Q9Y4E6 1490 aa19.9■□□□□ 0.78
CHMP2A-206ENST00000600118 TIAM1Q13009 1591 aa19.9■□□□□ 0.78
CHMP2A-206ENST00000600118 PLEKHD1A6NEE1 506 aa19.89■□□□□ 0.77
CHMP2A-206ENST00000600118 CDK11AQ9UQ88 783 aaPredicted RBP19.89■□□□□ 0.77
CHMP2A-206ENST00000600118 CFAP43Q8NDM7 1665 aa19.87■□□□□ 0.77
CHMP2A-206ENST00000600118 MAGI3Q5TCQ9 1506 aa19.87■□□□□ 0.77
CHMP2A-206ENST00000600118 TROQ12816 1431 aaPredicted RBP19.87■□□□□ 0.77
CHMP2A-206ENST00000600118 APLP2Q06481 763 aa19.85■□□□□ 0.77
CHMP2A-206ENST00000600118 KANK4Q5T7N3 995 aaPredicted RBP19.83■□□□□ 0.77
CHMP2A-206ENST00000600118 LRRC9Q6ZRR7 1453 aa19.83■□□□□ 0.76
CHMP2A-206ENST00000600118 ABCC10Q5T3U5 1492 aa19.82■□□□□ 0.76
CHMP2A-206ENST00000600118 MTUS2Q5JR59 1369 aa19.82■□□□□ 0.76
CHMP2A-206ENST00000600118 EHBP1L1Q8N3D4 1523 aa19.8■□□□□ 0.76
CHMP2A-206ENST00000600118 KCNH8Q96L42 1107 aa19.78■□□□□ 0.76
CHMP2A-206ENST00000600118 GLI2P10070 1586 aa19.78■□□□□ 0.76
CHMP2A-206ENST00000600118 DIP2BQ9P265 1576 aa19.78■□□□□ 0.76
CHMP2A-206ENST00000600118 KIF14Q15058 1648 aa19.75■□□□□ 0.75
CHMP2A-206ENST00000600118 FAM69CQ0P6D2 419 aa19.74■□□□□ 0.75
CHMP2A-206ENST00000600118 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.73■□□□□ 0.75
CHMP2A-206ENST00000600118 ABCA9Q8IUA7 1624 aa19.72■□□□□ 0.75
CHMP2A-206ENST00000600118 NCOA2Q15596 1464 aa19.7■□□□□ 0.74
CHMP2A-206ENST00000600118 TTC37Q6PGP7 1564 aa19.69■□□□□ 0.74
CHMP2A-206ENST00000600118 KIF13AQ9H1H9 1805 aa19.68■□□□□ 0.74
CHMP2A-206ENST00000600118 CD109Q6YHK3 1445 aa19.68■□□□□ 0.74
CHMP2A-206ENST00000600118 SUPT6HQ7KZ85 1726 aaKnown RBP19.67■□□□□ 0.74
CHMP2A-206ENST00000600118 MAP3K4Q9Y6R4 1608 aa19.66■□□□□ 0.74
CHMP2A-206ENST00000600118 TRHP20396 242 aaPredicted RBP19.66■□□□□ 0.74
CHMP2A-206ENST00000600118 PPARGC1BQ86YN6 1023 aaKnown RBP19.65■□□□□ 0.74
CHMP2A-206ENST00000600118 PLCH2O75038 1416 aa19.65■□□□□ 0.74
CHMP2A-206ENST00000600118 GPATCH8Q9UKJ3 1502 aaKnown RBP19.65■□□□□ 0.74
CHMP2A-206ENST00000600118 CCNB3Q8WWL7 1395 aa19.63■□□□□ 0.73
CHMP2A-206ENST00000600118 ARAP3Q8WWN8 1544 aa19.62■□□□□ 0.73
CHMP2A-206ENST00000600118 PHLDB1Q86UU1 1377 aa19.62■□□□□ 0.73
CHMP2A-206ENST00000600118 MYOM3Q5VTT5 1437 aa19.59■□□□□ 0.73
CHMP2A-206ENST00000600118 PREX2Q70Z35 1606 aa19.58■□□□□ 0.72
CHMP2A-206ENST00000600118 PPRC1Q5VV67 1664 aaKnown RBP19.57■□□□□ 0.72
CHMP2A-206ENST00000600118 CDC42BPAQ5VT25 1732 aa19.56■□□□□ 0.72
CHMP2A-206ENST00000600118 MYO5CQ9NQX4 1742 aa19.56■□□□□ 0.72
CHMP2A-206ENST00000600118 TEX14Q8IWB6 1497 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms