RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 FHAD1B1AJZ9 1412 aa20.38■□□□□ 0.85
SYMPK-213ENST00000599460 DAXXQ9UER7 740 aaPredicted RBP20.36■□□□□ 0.85
SYMPK-213ENST00000599460 KDM2AQ9Y2K7 1162 aa20.36■□□□□ 0.85
SYMPK-213ENST00000599460 DDX10Q13206 875 aaKnown RBP20.3■□□□□ 0.84
SYMPK-213ENST00000599460 NEFMP07197 916 aa20.27■□□□□ 0.84
SYMPK-213ENST00000599460 CLSPNQ9HAW4 1339 aa20.27■□□□□ 0.84
SYMPK-213ENST00000599460 FANCD2Q9BXW9 1451 aa20.26■□□□□ 0.83
SYMPK-213ENST00000599460 CCNB3Q8WWL7 1395 aa20.25■□□□□ 0.83
SYMPK-213ENST00000599460 VPS8Q8N3P4 1428 aa20.23■□□□□ 0.83
SYMPK-213ENST00000599460 SLC24A1O60721 1099 aa20.21■□□□□ 0.83
SYMPK-213ENST00000599460 GTF3C3Q9Y5Q9 886 aa20.21■□□□□ 0.83
SYMPK-213ENST00000599460 ACIN1Q9UKV3 1341 aaKnown RBP20.2■□□□□ 0.82
SYMPK-213ENST00000599460 CARMIL2Q6F5E8 1435 aa20.2■□□□□ 0.82
SYMPK-213ENST00000599460 HIRIP3Q9BW71 556 aaPredicted RBP20.18■□□□□ 0.82
SYMPK-213ENST00000599460 RAPGEF2Q9Y4G8 1499 aa20.18■□□□□ 0.82
SYMPK-213ENST00000599460 CANXP27824 592 aaKnown RBP20.16■□□□□ 0.82
SYMPK-213ENST00000599460 RGL3Q3MIN7 710 aa20.15■□□□□ 0.82
SYMPK-213ENST00000599460 NCAPD3P42695 1498 aa20.15■□□□□ 0.82
SYMPK-213ENST00000599460 SENP3Q9H4L4 574 aaPredicted RBP20.14■□□□□ 0.81
SYMPK-213ENST00000599460 KANK4Q5T7N3 995 aaPredicted RBP20.14■□□□□ 0.81
SYMPK-213ENST00000599460 ARID4BQ4LE39 1312 aaPredicted RBP20.12■□□□□ 0.81
SYMPK-213ENST00000599460 EIF4G2P78344 907 aaKnown RBP eCLIP20.12■□□□□ 0.812e-7■■■■■ 34.2
SYMPK-213ENST00000599460 FMN1Q68DA7 1419 aa20.11■□□□□ 0.81
SYMPK-213ENST00000599460 FAM9BQ8IZU0 186 aa20.1■□□□□ 0.81
SYMPK-213ENST00000599460 RUSC2Q8N2Y8 1516 aa20.1■□□□□ 0.81
SYMPK-213ENST00000599460 ARHGAP35Q9NRY4 1499 aa20.09■□□□□ 0.81
SYMPK-213ENST00000599460 PPP1R15AO75807 674 aaPredicted RBP20.08■□□□□ 0.8
SYMPK-213ENST00000599460 HNRNPUQ00839 825 aaKnown RBP eCLIP20.05■□□□□ 0.8
SYMPK-213ENST00000599460 FHOD3Q2V2M9 1422 aa20.04■□□□□ 0.8
SYMPK-213ENST00000599460 SIN3AQ96ST3 1273 aa20.04■□□□□ 0.8
SYMPK-213ENST00000599460 TMC1Q8TDI8 760 aa20.03■□□□□ 0.8
SYMPK-213ENST00000599460 ZBTB47Q9UFB7 747 aaPredicted RBP20.03■□□□□ 0.8
SYMPK-213ENST00000599460 FGD5Q6ZNL6 1462 aa20.01■□□□□ 0.79
SYMPK-213ENST00000599460 SALL2Q9Y467 1007 aaPredicted RBP19.98■□□□□ 0.79
SYMPK-213ENST00000599460 JPH4Q96JJ6 628 aa19.98■□□□□ 0.79
SYMPK-213ENST00000599460 MRS2Q9HD23 443 aa19.96■□□□□ 0.79
SYMPK-213ENST00000599460 BCL11AQ9H165 835 aa19.96■□□□□ 0.79
SYMPK-213ENST00000599460 RAD54L2Q9Y4B4 1467 aa19.96■□□□□ 0.79
SYMPK-213ENST00000599460 MIER1Q8N108 512 aa19.95■□□□□ 0.78
SYMPK-213ENST00000599460 TRHP20396 242 aaPredicted RBP19.94■□□□□ 0.78
SYMPK-213ENST00000599460 CARD11Q9BXL7 1154 aa19.94■□□□□ 0.78
SYMPK-213ENST00000599460 SETD5Q9C0A6 1442 aa19.94■□□□□ 0.78
SYMPK-213ENST00000599460 WDR43Q15061 677 aaKnown RBP eCLIP19.93■□□□□ 0.783e-6■■■■□ 24.6
SYMPK-213ENST00000599460 CC2D2AQ9P2K1 1620 aa19.92■□□□□ 0.78
SYMPK-213ENST00000599460 GAPVD1Q14C86 1478 aa19.92■□□□□ 0.78
SYMPK-213ENST00000599460 KANK1Q14678 1352 aa19.9■□□□□ 0.78
SYMPK-213ENST00000599460 IGF1RP08069 1367 aa19.89■□□□□ 0.77
SYMPK-213ENST00000599460 EFCAB2Q5VUJ9 269 aa19.87■□□□□ 0.77
SYMPK-213ENST00000599460 MLECQ14165 292 aa19.85■□□□□ 0.77
SYMPK-213ENST00000599460 FKBP8Q14318 412 aa19.84■□□□□ 0.77
SYMPK-213ENST00000599460 CFTRP13569 1480 aa19.84■□□□□ 0.77
SYMPK-213ENST00000599460 C14orf37Q86TY3 774 aa19.83■□□□□ 0.77
SYMPK-213ENST00000599460 SCAF1Q9H7N4 1312 aaKnown RBP19.83■□□□□ 0.76
SYMPK-213ENST00000599460 CDCA8Q53HL2 280 aa19.82■□□□□ 0.76
SYMPK-213ENST00000599460 DCAF11Q8TEB1 546 aa19.82■□□□□ 0.76
SYMPK-213ENST00000599460 NESP48681 1621 aa19.82■□□□□ 0.76
SYMPK-213ENST00000599460 CCDC18Q5T9S5 1454 aa19.82■□□□□ 0.76
SYMPK-213ENST00000599460 HMGXB3Q12766 1538 aa19.81■□□□□ 0.76
SYMPK-213ENST00000599460 GGT6Q6P531 493 aa19.81■□□□□ 0.76
SYMPK-213ENST00000599460 PKD2Q13563 968 aa19.8■□□□□ 0.76
SYMPK-213ENST00000599460 AQRO60306 1485 aaKnown RBP eCLIP19.8■□□□□ 0.761e-7■■■■■ 34.1
SYMPK-213ENST00000599460 RAB3GAP2Q9H2M9 1393 aa19.79■□□□□ 0.76
SYMPK-213ENST00000599460 FOXD1Q16676 465 aa19.79■□□□□ 0.76
SYMPK-213ENST00000599460 HNRNPMP52272 730 aaKnown RBP eCLIP19.79■□□□□ 0.76
SYMPK-213ENST00000599460 ANKRD30AQ9BXX3 1397 aa19.78■□□□□ 0.76
SYMPK-213ENST00000599460 BICRAQ9NZM4 1560 aa19.78■□□□□ 0.76
SYMPK-213ENST00000599460 PLEKHG5O94827 1062 aa19.77■□□□□ 0.75
SYMPK-213ENST00000599460 KNSTRNQ9Y448 316 aa19.76■□□□□ 0.75
SYMPK-213ENST00000599460 PTPRGP23470 1445 aa19.76■□□□□ 0.75
SYMPK-213ENST00000599460 POGKQ9P215 609 aa19.75■□□□□ 0.75
SYMPK-213ENST00000599460 ZBTB7CA1YPR0 619 aa19.74■□□□□ 0.75
SYMPK-213ENST00000599460 TIMELESSQ9UNS1 1208 aa19.74■□□□□ 0.75
SYMPK-213ENST00000599460 MPHOSPH9Q99550 1183 aa19.74■□□□□ 0.75
SYMPK-213ENST00000599460 RTL5Q5HYW3 569 aaPredicted RBP19.73■□□□□ 0.75
SYMPK-213ENST00000599460 NUP155O75694 1391 aa19.73■□□□□ 0.75
SYMPK-213ENST00000599460 SYNJ1O43426 1573 aa19.73■□□□□ 0.75
SYMPK-213ENST00000599460 OSCARQ8IYS5 282 aa19.71■□□□□ 0.75
SYMPK-213ENST00000599460 MRC2Q9UBG0 1479 aa19.68■□□□□ 0.74
SYMPK-213ENST00000599460 RSPH4AQ5TD94 716 aa19.67■□□□□ 0.74
SYMPK-213ENST00000599460 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.67■□□□□ 0.74
SYMPK-213ENST00000599460 SPAG9O60271 1321 aaKnown RBP19.66■□□□□ 0.74
SYMPK-213ENST00000599460 KIF3BO15066 747 aa19.66■□□□□ 0.74
SYMPK-213ENST00000599460 CFAP53Q96M91 514 aa19.65■□□□□ 0.74
SYMPK-213ENST00000599460 GRIN2BQ13224 1484 aa19.64■□□□□ 0.74
SYMPK-213ENST00000599460 HDGFP51858 240 aaKnown RBP19.63■□□□□ 0.73
SYMPK-213ENST00000599460 TMF1P82094 1093 aa19.63■□□□□ 0.73
SYMPK-213ENST00000599460 PPM1GO15355 546 aaPredicted RBP19.63■□□□□ 0.73
SYMPK-213ENST00000599460 CYB5RLQ6IPT4 315 aa19.62■□□□□ 0.73
SYMPK-213ENST00000599460 SENP3-EIF4A1A0A087X0R7 540 aa19.62■□□□□ 0.73
SYMPK-213ENST00000599460 TOPBP1Q92547 1522 aa19.61■□□□□ 0.73
SYMPK-213ENST00000599460 CUX1P39880 1505 aa19.61■□□□□ 0.73
SYMPK-213ENST00000599460 TOP2BQ02880 1626 aa19.6■□□□□ 0.73
SYMPK-213ENST00000599460 HSPA5P11021 654 aaKnown RBP19.59■□□□□ 0.73
SYMPK-213ENST00000599460 CC2D1BQ5T0F9 858 aaKnown RBP19.59■□□□□ 0.73
SYMPK-213ENST00000599460 CCDC136Q96JN2 1154 aa19.58■□□□□ 0.73
SYMPK-213ENST00000599460 KIF21BO75037 1637 aa19.57■□□□□ 0.72
SYMPK-213ENST00000599460 IRX6P78412 446 aaPredicted RBP19.57■□□□□ 0.72
SYMPK-213ENST00000599460 NPM2Q86SE8 214 aaKnown RBP19.57■□□□□ 0.72
SYMPK-213ENST00000599460 IFT140Q96RY7 1462 aa19.56■□□□□ 0.72
SYMPK-213ENST00000599460 TNNT2P45379 298 aaPredicted RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms