RNA–Protein interactions for RNA: ENST00000599316.1

AC243960.3-201, humanhuman

TSL 4 BASIC

Gene AC243960.3, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243960.3-201ENST00000599316 GAPVD1Q14C86 1478 aa14.11□□□□□ -0.15
AC243960.3-201ENST00000599316 CUX1P39880 1505 aa14.06□□□□□ -0.16
AC243960.3-201ENST00000599316 PBRM1Q86U86 1689 aa14.06□□□□□ -0.16
AC243960.3-201ENST00000599316 ABCA10Q8WWZ4 1543 aa13.99□□□□□ -0.17
AC243960.3-201ENST00000599316 GRIN2AQ12879 1464 aa13.95□□□□□ -0.18
AC243960.3-201ENST00000599316 ABCA5Q8WWZ7 1642 aa13.95□□□□□ -0.18
AC243960.3-201ENST00000599316 NPM1P06748 294 aaKnown RBP eCLIP13.93□□□□□ -0.18
AC243960.3-201ENST00000599316 C1QBPQ07021 282 aaKnown RBP13.93□□□□□ -0.18
AC243960.3-201ENST00000599316 CEP170Q5SW79 1584 aa13.92□□□□□ -0.18
AC243960.3-201ENST00000599316 ERCC6L2Q5T890 1561 aa13.92□□□□□ -0.18
AC243960.3-201ENST00000599316 WRNQ14191 1432 aaPredicted RBP eCLIP13.92□□□□□ -0.18
AC243960.3-201ENST00000599316 NUP160Q12769 1436 aa13.9□□□□□ -0.19
AC243960.3-201ENST00000599316 FHAD1B1AJZ9 1412 aa13.89□□□□□ -0.19
AC243960.3-201ENST00000599316 KIF13AQ9H1H9 1805 aa13.87□□□□□ -0.19
AC243960.3-201ENST00000599316 FAM69CQ0P6D2 419 aa13.87□□□□□ -0.19
AC243960.3-201ENST00000599316 JPH4Q96JJ6 628 aa13.87□□□□□ -0.19
AC243960.3-201ENST00000599316 ADAMTS12P58397 1594 aa13.87□□□□□ -0.19
AC243960.3-201ENST00000599316 SHROOM2Q13796 1616 aa13.86□□□□□ -0.19
AC243960.3-201ENST00000599316 PRG4Q92954 1404 aaPredicted RBP13.85□□□□□ -0.19
AC243960.3-201ENST00000599316 ERICH3Q5RHP9 1530 aa13.82□□□□□ -0.2
AC243960.3-201ENST00000599316 SUPT5HO00267 1087 aaKnown RBP13.82□□□□□ -0.2
AC243960.3-201ENST00000599316 TOP2BQ02880 1626 aa13.79□□□□□ -0.2
AC243960.3-201ENST00000599316 BIVM-ERCC5R4GMW8 1640 aa13.79□□□□□ -0.2
AC243960.3-201ENST00000599316 ABCC10Q5T3U5 1492 aa13.78□□□□□ -0.2
AC243960.3-201ENST00000599316 NCBP3Q53F19 620 aaKnown RBP13.73□□□□□ -0.21
AC243960.3-201ENST00000599316 TSPOAP1O95153 1857 aa13.72□□□□□ -0.21
AC243960.3-201ENST00000599316 MAPKBP1O60336 1514 aa13.72□□□□□ -0.21
AC243960.3-201ENST00000599316 KDM6BO15054 1643 aa13.72□□□□□ -0.21
AC243960.3-201ENST00000599316 KDM4FA0A1W2PPD8 638 aa13.71□□□□□ -0.21
AC243960.3-201ENST00000599316 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.7□□□□□ -0.22
AC243960.3-201ENST00000599316 DIP2BQ9P265 1576 aa13.7□□□□□ -0.22
AC243960.3-201ENST00000599316 ADCY10Q96PN6 1610 aa13.67□□□□□ -0.22
AC243960.3-201ENST00000599316 RUSC2Q8N2Y8 1516 aa13.66□□□□□ -0.22
AC243960.3-201ENST00000599316 KIAA0586Q9BVV6 1533 aa13.65□□□□□ -0.22
AC243960.3-201ENST00000599316 NPM3O75607 178 aaKnown RBP13.65□□□□□ -0.22
AC243960.3-201ENST00000599316 ILDR1Q86SU0 546 aaPredicted RBP13.64□□□□□ -0.23
AC243960.3-201ENST00000599316 TTBK1Q5TCY1 1321 aaPredicted RBP13.64□□□□□ -0.23
AC243960.3-201ENST00000599316 PTPRGP23470 1445 aa13.62□□□□□ -0.23
AC243960.3-201ENST00000599316 CARMIL2Q6F5E8 1435 aa13.59□□□□□ -0.23
AC243960.3-201ENST00000599316 IGF1RP08069 1367 aa13.58□□□□□ -0.23
AC243960.3-201ENST00000599316 KIF27Q86VH2 1401 aa13.57□□□□□ -0.24
AC243960.3-201ENST00000599316 CUL7Q14999 1698 aa13.56□□□□□ -0.24
AC243960.3-201ENST00000599316 PLB1Q6P1J6 1458 aa13.56□□□□□ -0.24
AC243960.3-201ENST00000599316 TNIKQ9UKE5 1360 aa13.56□□□□□ -0.24
AC243960.3-201ENST00000599316 ABCC2Q92887 1545 aa13.54□□□□□ -0.24
AC243960.3-201ENST00000599316 ASXL2Q76L83 1435 aa13.53□□□□□ -0.24
AC243960.3-201ENST00000599316 CARMIL1Q5VZK9 1371 aa13.52□□□□□ -0.25
AC243960.3-201ENST00000599316 GLI2P10070 1586 aa13.51□□□□□ -0.25
AC243960.3-201ENST00000599316 ADGRL1O94910 1474 aa13.5□□□□□ -0.25
AC243960.3-201ENST00000599316 UACAQ9BZF9 1416 aa13.48□□□□□ -0.25
AC243960.3-201ENST00000599316 TEX14Q8IWB6 1497 aa13.48□□□□□ -0.25
AC243960.3-201ENST00000599316 UHRF1BP1LA0JNW5 1464 aa13.47□□□□□ -0.25
AC243960.3-201ENST00000599316 PPRC1Q5VV67 1664 aaKnown RBP13.47□□□□□ -0.25
AC243960.3-201ENST00000599316 IQGAP2Q13576 1575 aa13.45□□□□□ -0.26
AC243960.3-201ENST00000599316 EPRSP07814 1512 aaKnown RBP13.43□□□□□ -0.26
AC243960.3-201ENST00000599316 KDM5BQ9UGL1 1544 aa13.41□□□□□ -0.26
AC243960.3-201ENST00000599316 MAP3K4Q9Y6R4 1608 aa13.41□□□□□ -0.26
AC243960.3-201ENST00000599316 COL17A1Q9UMD9 1497 aaPredicted RBP13.41□□□□□ -0.26
AC243960.3-201ENST00000599316 HECW2Q9P2P5 1572 aa13.41□□□□□ -0.26
AC243960.3-201ENST00000599316 U3KPZ7 1027 aaPredicted RBP13.4□□□□□ -0.26
AC243960.3-201ENST00000599316 FAM9AQ8IZU1 332 aaPredicted RBP13.39□□□□□ -0.27
AC243960.3-201ENST00000599316 ZCCHC11Q5TAX3 1644 aaKnown RBP13.38□□□□□ -0.27
AC243960.3-201ENST00000599316 DISP1Q96F81 1524 aa13.38□□□□□ -0.27
AC243960.3-201ENST00000599316 KCNH8Q96L42 1107 aa13.37□□□□□ -0.27
AC243960.3-201ENST00000599316 SPINK5Q9NQ38 1064 aaPredicted RBP13.36□□□□□ -0.27
AC243960.3-201ENST00000599316 RAPGEF2Q9Y4G8 1499 aa13.35□□□□□ -0.27
AC243960.3-201ENST00000599316 CD109Q6YHK3 1445 aa13.34□□□□□ -0.27
AC243960.3-201ENST00000599316 WDR7Q9Y4E6 1490 aa13.34□□□□□ -0.27
AC243960.3-201ENST00000599316 UGGT2Q9NYU1 1516 aa13.34□□□□□ -0.27
AC243960.3-201ENST00000599316 FBXO41Q8TF61 875 aa13.32□□□□□ -0.28
AC243960.3-201ENST00000599316 KIAA0556O60303 1618 aa13.31□□□□□ -0.28
AC243960.3-201ENST00000599316 CFAP43Q8NDM7 1665 aa13.31□□□□□ -0.28
AC243960.3-201ENST00000599316 MAGI3Q5TCQ9 1506 aa13.3□□□□□ -0.28
AC243960.3-201ENST00000599316 CAPN15O75808 1086 aa13.3□□□□□ -0.28
AC243960.3-201ENST00000599316 GOLGA3Q08378 1498 aa13.29□□□□□ -0.28
AC243960.3-201ENST00000599316 DSG3P32926 999 aa13.26□□□□□ -0.29
AC243960.3-201ENST00000599316 CTTNBP2Q8WZ74 1663 aa13.24□□□□□ -0.29
AC243960.3-201ENST00000599316 PHLDB1Q86UU1 1377 aa13.23□□□□□ -0.29
AC243960.3-201ENST00000599316 KIF21BO75037 1637 aa13.23□□□□□ -0.29
AC243960.3-201ENST00000599316 ARID4BQ4LE39 1312 aaPredicted RBP13.21□□□□□ -0.29
AC243960.3-201ENST00000599316 ARAP3Q8WWN8 1544 aa13.21□□□□□ -0.29
AC243960.3-201ENST00000599316 ABCA8O94911 1581 aa13.2□□□□□ -0.3
AC243960.3-201ENST00000599316 KCNA4P22459 653 aa13.2□□□□□ -0.3
AC243960.3-201ENST00000599316 ARID3CA6NKF2 412 aa13.18□□□□□ -0.3
AC243960.3-201ENST00000599316 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.18□□□□□ -0.3
AC243960.3-201ENST00000599316 HNRNPUL2Q1KMD3 747 aaKnown RBP13.18□□□□□ -0.3
AC243960.3-201ENST00000599316 PTPRMP28827 1452 aa13.17□□□□□ -0.3
AC243960.3-201ENST00000599316 RAPGEF3O95398 923 aa13.16□□□□□ -0.3
AC243960.3-201ENST00000599316 P3H3Q8IVL6 736 aa13.16□□□□□ -0.3
AC243960.3-201ENST00000599316 ADAMTSL3P82987 1691 aa13.15□□□□□ -0.31
AC243960.3-201ENST00000599316 SLC4A2P04920 1241 aa13.14□□□□□ -0.31
AC243960.3-201ENST00000599316 ATP10BO94823 1461 aa13.13□□□□□ -0.31
AC243960.3-201ENST00000599316 NEO1Q92859 1461 aa13.11□□□□□ -0.31
AC243960.3-201ENST00000599316 ABCA9Q8IUA7 1624 aa13.11□□□□□ -0.31
AC243960.3-201ENST00000599316 POTEHQ6S545 545 aa13.11□□□□□ -0.31
AC243960.3-201ENST00000599316 BCORL1Q5H9F3 1711 aa13.1□□□□□ -0.31
AC243960.3-201ENST00000599316 PCF11O94913 1555 aaKnown RBP13.09□□□□□ -0.31
AC243960.3-201ENST00000599316 PLEKHD1A6NEE1 506 aa13.08□□□□□ -0.32
AC243960.3-201ENST00000599316 PRXQ9BXM0 1461 aa13.07□□□□□ -0.32
AC243960.3-201ENST00000599316 MADDQ8WXG6 1647 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms