RNA–Protein interactions for RNA: ENST00000598502.5

TRPM4-209, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 1 (best)

Gene TRPM4, Length 3,695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-209ENST00000598502 FAM50AQ14320 339 aaKnown RBP22.3■■□□□ 1.16
TRPM4-209ENST00000598502 FANCD2Q9BXW9 1451 aa22.3■■□□□ 1.16
TRPM4-209ENST00000598502 NEFLP07196 543 aa22.28■■□□□ 1.16
TRPM4-209ENST00000598502 RAD54L2Q9Y4B4 1467 aa22.28■■□□□ 1.16
TRPM4-209ENST00000598502 DNAJC5BQ9UF47 199 aa22.27■■□□□ 1.16
TRPM4-209ENST00000598502 CCNB3Q8WWL7 1395 aa22.21■■□□□ 1.15
TRPM4-209ENST00000598502 CLSPNQ9HAW4 1339 aa22.2■■□□□ 1.15
TRPM4-209ENST00000598502 DHX57Q6P158 1386 aaKnown RBP22.19■■□□□ 1.14
TRPM4-209ENST00000598502 KCNH8Q96L42 1107 aa22.14■■□□□ 1.13
TRPM4-209ENST00000598502 TDRD9Q8NDG6 1382 aaKnown RBP22.13■■□□□ 1.13
TRPM4-209ENST00000598502 FHOD3Q2V2M9 1422 aa22.13■■□□□ 1.13
TRPM4-209ENST00000598502 POLA1P09884 1462 aaPredicted RBP22.08■■□□□ 1.13
TRPM4-209ENST00000598502 RRBP1Q9P2E9 1410 aaKnown RBP22.08■■□□□ 1.13
TRPM4-209ENST00000598502 PRDM2Q13029 1718 aa22.08■■□□□ 1.12
TRPM4-209ENST00000598502 RBM19Q9Y4C8 960 aaKnown RBP22.08■■□□□ 1.12
TRPM4-209ENST00000598502 TOPBP1Q92547 1522 aa22.07■■□□□ 1.12
TRPM4-209ENST00000598502 PHLDB1Q86UU1 1377 aa22.03■■□□□ 1.12
TRPM4-209ENST00000598502 RAB3GAP2Q9H2M9 1393 aa22.03■■□□□ 1.12
TRPM4-209ENST00000598502 ARID3CA6NKF2 412 aa22.03■■□□□ 1.12
TRPM4-209ENST00000598502 TRIM52Q96A61 297 aa22.02■■□□□ 1.12
TRPM4-209ENST00000598502 DNMBPQ6XZF7 1577 aa21.99■■□□□ 1.11
TRPM4-209ENST00000598502 FHAD1B1AJZ9 1412 aa21.99■■□□□ 1.11
TRPM4-209ENST00000598502 SIN3AQ96ST3 1273 aa21.99■■□□□ 1.11
TRPM4-209ENST00000598502 LRRC9Q6ZRR7 1453 aa21.97■■□□□ 1.11
TRPM4-209ENST00000598502 TIAM1Q13009 1591 aa21.97■■□□□ 1.11
TRPM4-209ENST00000598502 DDX10Q13206 875 aaKnown RBP21.96■■□□□ 1.11
TRPM4-209ENST00000598502 ABCA10Q8WWZ4 1543 aa21.94■■□□□ 1.1
TRPM4-209ENST00000598502 URB2Q14146 1524 aaKnown RBP21.92■■□□□ 1.1
TRPM4-209ENST00000598502 PCF11O94913 1555 aaKnown RBP21.9■■□□□ 1.1
TRPM4-209ENST00000598502 IRX6P78412 446 aaPredicted RBP21.9■■□□□ 1.1
TRPM4-209ENST00000598502 MTUS2Q5JR59 1369 aa21.89■■□□□ 1.1
TRPM4-209ENST00000598502 SETD5Q9C0A6 1442 aa21.89■■□□□ 1.09
TRPM4-209ENST00000598502 HIRIP3Q9BW71 556 aaPredicted RBP21.88■■□□□ 1.09
TRPM4-209ENST00000598502 PDS5BQ9NTI5 1447 aa21.87■■□□□ 1.09
TRPM4-209ENST00000598502 GAPVD1Q14C86 1478 aa21.84■■□□□ 1.09
TRPM4-209ENST00000598502 CHIC2Q9UKJ5 165 aa21.8■■□□□ 1.08
TRPM4-209ENST00000598502 CDK11AQ9UQ88 783 aaPredicted RBP21.79■■□□□ 1.08
TRPM4-209ENST00000598502 CASKIN1Q8WXD9 1431 aa21.77■■□□□ 1.08
TRPM4-209ENST00000598502 FMN1Q68DA7 1419 aa21.77■■□□□ 1.08
TRPM4-209ENST00000598502 LAMC3Q9Y6N6 1575 aa21.77■■□□□ 1.07
TRPM4-209ENST00000598502 MAP3K1Q13233 1512 aa21.75■■□□□ 1.07
TRPM4-209ENST00000598502 AQRO60306 1485 aaKnown RBP eCLIP21.74■■□□□ 1.077e-7■■■■□ 25.1
TRPM4-209ENST00000598502 FYCO1Q9BQS8 1478 aa21.74■■□□□ 1.07
TRPM4-209ENST00000598502 NBR1Q14596 966 aa21.73■■□□□ 1.07
TRPM4-209ENST00000598502 RRP7BPQ9NSQ0 103 aa21.73■■□□□ 1.07
TRPM4-209ENST00000598502 MSH5O43196 834 aa21.72■■□□□ 1.07
TRPM4-209ENST00000598502 PRKCSHP14314 528 aaPredicted RBP21.71■■□□□ 1.07
TRPM4-209ENST00000598502 CUL7Q14999 1698 aa21.71■■□□□ 1.07
TRPM4-209ENST00000598502 EFCAB5A4FU69 1503 aa21.7■■□□□ 1.06
TRPM4-209ENST00000598502 MAPKBP1O60336 1514 aa21.7■■□□□ 1.06
TRPM4-209ENST00000598502 ANP32CO43423 234 aa21.69■■□□□ 1.06
TRPM4-209ENST00000598502 FBLN2P98095 1184 aa21.67■■□□□ 1.06
TRPM4-209ENST00000598502 FGD6Q6ZV73 1430 aa21.67■■□□□ 1.06
TRPM4-209ENST00000598502 KIF21AQ7Z4S6 1674 aa21.65■■□□□ 1.06
TRPM4-209ENST00000598502 CTTNBP2Q8WZ74 1663 aa21.65■■□□□ 1.06
TRPM4-209ENST00000598502 CFAP43Q8NDM7 1665 aa21.64■■□□□ 1.06
TRPM4-209ENST00000598502 DEKP35659 375 aaKnown RBP21.64■■□□□ 1.05
TRPM4-209ENST00000598502 TONSLQ96HA7 1378 aa21.6■■□□□ 1.05
TRPM4-209ENST00000598502 SNAPC4Q5SXM2 1469 aa21.6■■□□□ 1.05
TRPM4-209ENST00000598502 HNRNPUQ00839 825 aaKnown RBP eCLIP21.59■■□□□ 1.05
TRPM4-209ENST00000598502 WDR97A6NE52 1622 aa21.59■■□□□ 1.05
TRPM4-209ENST00000598502 NCOA2Q15596 1464 aa21.59■■□□□ 1.05
TRPM4-209ENST00000598502 ABCA5Q8WWZ7 1642 aa21.58■■□□□ 1.04
TRPM4-209ENST00000598502 PTPRKQ15262 1439 aa21.58■■□□□ 1.04
TRPM4-209ENST00000598502 PPP1R15AO75807 674 aaPredicted RBP21.56■■□□□ 1.04
TRPM4-209ENST00000598502 CCDC18Q5T9S5 1454 aa21.54■■□□□ 1.04
TRPM4-209ENST00000598502 MYOM3Q5VTT5 1437 aa21.52■■□□□ 1.04
TRPM4-209ENST00000598502 FOXD1Q16676 465 aa21.51■■□□□ 1.03
TRPM4-209ENST00000598502 CNGB1Q14028 1251 aaPredicted RBP21.5■■□□□ 1.03
TRPM4-209ENST00000598502 ZNF608Q9ULD9 1512 aaPredicted RBP21.5■■□□□ 1.03
TRPM4-209ENST00000598502 GRIN2BQ13224 1484 aa21.49■■□□□ 1.03
TRPM4-209ENST00000598502 RTN4Q9NQC3 1192 aaKnown RBP21.48■■□□□ 1.03
TRPM4-209ENST00000598502 CHMP7Q8WUX9 453 aaPredicted RBP21.47■■□□□ 1.03
TRPM4-209ENST00000598502 CDK13Q14004 1512 aaKnown RBP21.46■■□□□ 1.03
TRPM4-209ENST00000598502 TARBP1Q13395 1621 aaKnown RBP21.46■■□□□ 1.03
TRPM4-209ENST00000598502 RTL5Q5HYW3 569 aaPredicted RBP21.46■■□□□ 1.03
TRPM4-209ENST00000598502 ANO8Q9HCE9 1232 aaPredicted RBP21.46■■□□□ 1.03
TRPM4-209ENST00000598502 ZNF777Q9ULD5 760 aaPredicted RBP21.46■■□□□ 1.03
TRPM4-209ENST00000598502 MRC2Q9UBG0 1479 aa21.46■■□□□ 1.03
TRPM4-209ENST00000598502 SAMD9Q5K651 1589 aa21.45■■□□□ 1.02
TRPM4-209ENST00000598502 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.44■■□□□ 1.021e-7■■□□□ 12.3
TRPM4-209ENST00000598502 NAIPQ13075 1403 aa21.43■■□□□ 1.02
TRPM4-209ENST00000598502 ZNF644Q9H582 1327 aaPredicted RBP21.42■■□□□ 1.02
TRPM4-209ENST00000598502 HFM1A2PYH4 1435 aa21.42■■□□□ 1.02
TRPM4-209ENST00000598502 ERCC6Q03468 1493 aa21.42■■□□□ 1.02
TRPM4-209ENST00000598502 MAGI3Q5TCQ9 1506 aa21.42■■□□□ 1.02
TRPM4-209ENST00000598502 TIMELESSQ9UNS1 1208 aa21.41■■□□□ 1.02
TRPM4-209ENST00000598502 LRRIQ1Q96JM4 1722 aa21.41■■□□□ 1.02
TRPM4-209ENST00000598502 B4GALNT3Q6L9W6 998 aa21.4■■□□□ 1.02
TRPM4-209ENST00000598502 IQGAP2Q13576 1575 aa21.4■■□□□ 1.02
TRPM4-209ENST00000598502 UACAQ9BZF9 1416 aa21.4■■□□□ 1.02
TRPM4-209ENST00000598502 SUPT6HQ7KZ85 1726 aaKnown RBP21.39■■□□□ 1.01
TRPM4-209ENST00000598502 EHBP1L1Q8N3D4 1523 aa21.39■■□□□ 1.01
TRPM4-209ENST00000598502 CCDC136Q96JN2 1154 aa21.38■■□□□ 1.01
TRPM4-209ENST00000598502 EPRSP07814 1512 aaKnown RBP21.37■■□□□ 1.01
TRPM4-209ENST00000598502 FANCIQ9NVI1 1328 aa21.37■■□□□ 1.01
TRPM4-209ENST00000598502 PTPN23Q9H3S7 1636 aa21.36■■□□□ 1.01
TRPM4-209ENST00000598502 PBRM1Q86U86 1689 aa21.35■■□□□ 1.01
TRPM4-209ENST00000598502 MYT1LQ9UL68 1186 aa21.35■■□□□ 1.01
TRPM4-209ENST00000598502 MPHOSPH9Q99550 1183 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms