RNA–Protein interactions for RNA: ENST00000598197.1

USP29-202, Transcript of ubiquitin specific peptidase 29, humanhuman

APPRIS P1 BASIC

Gene USP29, Length 3,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-202ENST00000598197 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.24□□□□□ -1.25
USP29-202ENST00000598197 TIMELESSQ9UNS1 1208 aa7.24□□□□□ -1.25
USP29-202ENST00000598197 DAXXQ9UER7 740 aaPredicted RBP7.23□□□□□ -1.25
USP29-202ENST00000598197 PBRM1Q86U86 1689 aa7.23□□□□□ -1.25
USP29-202ENST00000598197 FANCD2Q9BXW9 1451 aa7.23□□□□□ -1.25
USP29-202ENST00000598197 IGF1RP08069 1367 aa7.23□□□□□ -1.25
USP29-202ENST00000598197 PPARGC1BQ86YN6 1023 aaKnown RBP7.22□□□□□ -1.25
USP29-202ENST00000598197 FAM9AQ8IZU1 332 aaPredicted RBP7.22□□□□□ -1.25
USP29-202ENST00000598197 FYCO1Q9BQS8 1478 aa7.22□□□□□ -1.25
USP29-202ENST00000598197 POLA1P09884 1462 aaPredicted RBP7.2□□□□□ -1.26
USP29-202ENST00000598197 PCF11O94913 1555 aaKnown RBP7.2□□□□□ -1.26
USP29-202ENST00000598197 PPP6R1Q9UPN7 881 aa7.19□□□□□ -1.26
USP29-202ENST00000598197 ARHGEF11O15085 1522 aa7.19□□□□□ -1.26
USP29-202ENST00000598197 SNAPC4Q5SXM2 1469 aa7.18□□□□□ -1.26
USP29-202ENST00000598197 URB2Q14146 1524 aaKnown RBP7.18□□□□□ -1.26
USP29-202ENST00000598197 FHAD1B1AJZ9 1412 aa7.17□□□□□ -1.26
USP29-202ENST00000598197 LRRC9Q6ZRR7 1453 aa7.16□□□□□ -1.26
USP29-202ENST00000598197 CASKIN1Q8WXD9 1431 aa7.16□□□□□ -1.26
USP29-202ENST00000598197 TULP1O00294 542 aaPredicted RBP7.15□□□□□ -1.26
USP29-202ENST00000598197 ADAMTS12P58397 1594 aa7.15□□□□□ -1.26
USP29-202ENST00000598197 TAOK2Q9UL54 1235 aa7.15□□□□□ -1.27
USP29-202ENST00000598197 GCC2Q8IWJ2 1684 aa7.14□□□□□ -1.27
USP29-202ENST00000598197 WDR62O43379 1518 aa7.14□□□□□ -1.27
USP29-202ENST00000598197 CARMIL1Q5VZK9 1371 aa7.14□□□□□ -1.27
USP29-202ENST00000598197 TPRNQ4KMQ1 711 aa7.13□□□□□ -1.27
USP29-202ENST00000598197 GRIN2BQ13224 1484 aa7.13□□□□□ -1.27
USP29-202ENST00000598197 UBTFP17480 764 aaKnown RBP7.12□□□□□ -1.27
USP29-202ENST00000598197 MAPKBP1O60336 1514 aa7.12□□□□□ -1.27
USP29-202ENST00000598197 SUPT6HQ7KZ85 1726 aaKnown RBP7.11□□□□□ -1.27
USP29-202ENST00000598197 UGGT2Q9NYU1 1516 aa7.11□□□□□ -1.27
USP29-202ENST00000598197 DHX57Q6P158 1386 aaKnown RBP7.11□□□□□ -1.27
USP29-202ENST00000598197 PDS5BQ9NTI5 1447 aa7.11□□□□□ -1.27
USP29-202ENST00000598197 EHBP1L1Q8N3D4 1523 aa7.1□□□□□ -1.27
USP29-202ENST00000598197 ADCY10Q96PN6 1610 aa7.1□□□□□ -1.27
USP29-202ENST00000598197 TCOF1Q13428 1488 aaKnown RBP7.1□□□□□ -1.27
USP29-202ENST00000598197 AKNAQ7Z591 1439 aa7.1□□□□□ -1.27
USP29-202ENST00000598197 FMN1Q68DA7 1419 aa7.09□□□□□ -1.27
USP29-202ENST00000598197 HECW1Q76N89 1606 aa7.09□□□□□ -1.27
USP29-202ENST00000598197 CCDC18Q5T9S5 1454 aa7.09□□□□□ -1.27
USP29-202ENST00000598197 CCNB3Q8WWL7 1395 aa7.09□□□□□ -1.28
USP29-202ENST00000598197 NPM3O75607 178 aaKnown RBP7.08□□□□□ -1.28
USP29-202ENST00000598197 NESP48681 1621 aa7.07□□□□□ -1.28
USP29-202ENST00000598197 GAPVD1Q14C86 1478 aa7.07□□□□□ -1.28
USP29-202ENST00000598197 POLR1AO95602 1720 aaPredicted RBP7.07□□□□□ -1.28
USP29-202ENST00000598197 IQGAP2Q13576 1575 aa7.07□□□□□ -1.28
USP29-202ENST00000598197 MRC2Q9UBG0 1479 aa7.06□□□□□ -1.28
USP29-202ENST00000598197 RAD54L2Q9Y4B4 1467 aa7.06□□□□□ -1.28
USP29-202ENST00000598197 CROCC2H7BZ55 1655 aa7.05□□□□□ -1.28
USP29-202ENST00000598197 HAP1P54257 671 aaPredicted RBP7.05□□□□□ -1.28
USP29-202ENST00000598197 PTPN23Q9H3S7 1636 aa7.05□□□□□ -1.28
USP29-202ENST00000598197 FKBP8Q14318 412 aa7.04□□□□□ -1.28
USP29-202ENST00000598197 CCER1Q8TC90 406 aaPredicted RBP7.04□□□□□ -1.28
USP29-202ENST00000598197 IFT140Q96RY7 1462 aa7.04□□□□□ -1.28
USP29-202ENST00000598197 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.03□□□□□ -1.28
USP29-202ENST00000598197 KIAA0556O60303 1618 aa7.03□□□□□ -1.28
USP29-202ENST00000598197 ADGBQ8N7X0 1667 aa7.03□□□□□ -1.28
USP29-202ENST00000598197 ZNF316A6NFI3 1004 aaPredicted RBP7.02□□□□□ -1.29
USP29-202ENST00000598197 HFM1A2PYH4 1435 aa7.02□□□□□ -1.29
USP29-202ENST00000598197 EIF4G3O43432 1585 aaKnown RBP7.02□□□□□ -1.29
USP29-202ENST00000598197 KANK4Q5T7N3 995 aaPredicted RBP7.02□□□□□ -1.29
USP29-202ENST00000598197 ITSN2Q9NZM3 1697 aa7.01□□□□□ -1.29
USP29-202ENST00000598197 KDM5BQ9UGL1 1544 aa7.01□□□□□ -1.29
USP29-202ENST00000598197 PHLDB1Q86UU1 1377 aa7.01□□□□□ -1.29
USP29-202ENST00000598197 SETD5Q9C0A6 1442 aa7.01□□□□□ -1.29
USP29-202ENST00000598197 MAGI3Q5TCQ9 1506 aa7.01□□□□□ -1.29
USP29-202ENST00000598197 FGD6Q6ZV73 1430 aa7□□□□□ -1.29
USP29-202ENST00000598197 DNMT1P26358 1616 aaKnown RBP7□□□□□ -1.29
USP29-202ENST00000598197 PLCB2Q00722 1185 aa7□□□□□ -1.29
USP29-202ENST00000598197 ACIN1Q9UKV3 1341 aaKnown RBP7□□□□□ -1.29
USP29-202ENST00000598197 MIA2Q96PC5 1412 aa7□□□□□ -1.29
USP29-202ENST00000598197 RAPGEF6Q8TEU7 1601 aa6.99□□□□□ -1.29
USP29-202ENST00000598197 MAGI1Q96QZ7 1491 aaPredicted RBP6.99□□□□□ -1.29
USP29-202ENST00000598197 MYOM3Q5VTT5 1437 aa6.98□□□□□ -1.29
USP29-202ENST00000598197 APLP2Q06481 763 aa6.98□□□□□ -1.29
USP29-202ENST00000598197 KIAA0586Q9BVV6 1533 aa6.98□□□□□ -1.29
USP29-202ENST00000598197 DISP1Q96F81 1524 aa6.97□□□□□ -1.29
USP29-202ENST00000598197 FHOD3Q2V2M9 1422 aa6.97□□□□□ -1.29
USP29-202ENST00000598197 NCOA2Q15596 1464 aa6.97□□□□□ -1.29
USP29-202ENST00000598197 RAB3GAP2Q9H2M9 1393 aa6.97□□□□□ -1.29
USP29-202ENST00000598197 EPRSP07814 1512 aaKnown RBP6.97□□□□□ -1.29
USP29-202ENST00000598197 DIEXFQ68CQ4 756 aaKnown RBP6.96□□□□□ -1.29
USP29-202ENST00000598197 BCANQ96GW7 911 aa6.96□□□□□ -1.29
USP29-202ENST00000598197 SHROOM2Q13796 1616 aa6.96□□□□□ -1.29
USP29-202ENST00000598197 UACAQ9BZF9 1416 aa6.96□□□□□ -1.29
USP29-202ENST00000598197 ROCK1Q13464 1354 aa6.95□□□□□ -1.3
USP29-202ENST00000598197 CEP170Q5SW79 1584 aa6.94□□□□□ -1.3
USP29-202ENST00000598197 DENND4BO75064 1496 aaPredicted RBP6.94□□□□□ -1.3
USP29-202ENST00000598197 ADGRL2O95490 1459 aa6.94□□□□□ -1.3
USP29-202ENST00000598197 GRIN2AQ12879 1464 aa6.94□□□□□ -1.3
USP29-202ENST00000598197 NUP160Q12769 1436 aa6.94□□□□□ -1.3
USP29-202ENST00000598197 ABCA8O94911 1581 aa6.94□□□□□ -1.3
USP29-202ENST00000598197 KDM5DQ9BY66 1539 aa6.94□□□□□ -1.3
USP29-202ENST00000598197 PELP1Q8IZL8 1130 aaKnown RBP6.93□□□□□ -1.3
USP29-202ENST00000598197 NAIPQ13075 1403 aa6.93□□□□□ -1.3
USP29-202ENST00000598197 SCAF1Q9H7N4 1312 aaKnown RBP6.93□□□□□ -1.3
USP29-202ENST00000598197 PPP4R3CPQ6ZMV5 832 aa6.93□□□□□ -1.3
USP29-202ENST00000598197 CDC42BPAQ5VT25 1732 aa6.92□□□□□ -1.3
USP29-202ENST00000598197 SHANK2Q9UPX8 1470 aa6.92□□□□□ -1.3
USP29-202ENST00000598197 PTPRKQ15262 1439 aa6.91□□□□□ -1.3
USP29-202ENST00000598197 SYNJ2O15056 1496 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms