RNA–Protein interactions for RNA: ENST00000598197.1

USP29-202, Transcript of ubiquitin specific peptidase 29, humanhuman

APPRIS P1 BASIC

Gene USP29, Length 3,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-202ENST00000598197 NISCHQ9Y2I1 1504 aa10.39□□□□□ -0.75
USP29-202ENST00000598197 CCDC180Q9P1Z9 1646 aa9.17□□□□□ -0.94
USP29-202ENST00000598197 CHIC1Q5VXU3 224 aa9.12□□□□□ -0.95
USP29-202ENST00000598197 AEBP2Q6ZN18 517 aaPredicted RBP8.95□□□□□ -0.98
USP29-202ENST00000598197 ZCCHC6Q5VYS8 1495 aaKnown RBP8.85□□□□□ -0.99
USP29-202ENST00000598197 DCAF1Q9Y4B6 1507 aa8.82□□□□□ -1
USP29-202ENST00000598197 MYO15BQ96JP2 1530 aa8.65□□□□□ -1.02
USP29-202ENST00000598197 EHMT2Q96KQ7 1210 aa8.51□□□□□ -1.05
USP29-202ENST00000598197 SLC24A1O60721 1099 aa8.38□□□□□ -1.07
USP29-202ENST00000598197 ABCC9O60706 1549 aa8.38□□□□□ -1.07
USP29-202ENST00000598197 NACADO15069 1562 aa8.33□□□□□ -1.08
USP29-202ENST00000598197 PHF23Q9BUL5 403 aaPredicted RBP8.28□□□□□ -1.08
USP29-202ENST00000598197 PLPPR3Q6T4P5 718 aa8.18□□□□□ -1.1
USP29-202ENST00000598197 SHROOM4Q9ULL8 1493 aa8.15□□□□□ -1.1
USP29-202ENST00000598197 RB1CC1Q8TDY2 1594 aa8.15□□□□□ -1.11
USP29-202ENST00000598197 UNC13AQ9UPW8 1703 aa8.14□□□□□ -1.11
USP29-202ENST00000598197 SCRIBQ14160 1630 aa8.11□□□□□ -1.11
USP29-202ENST00000598197 EIF4G1Q04637 1599 aaKnown RBP8.1□□□□□ -1.11
USP29-202ENST00000598197 RSF1Q96T23 1441 aaPredicted RBP8.08□□□□□ -1.12
USP29-202ENST00000598197 BAZ1AQ9NRL2 1556 aaPredicted RBP8.07□□□□□ -1.12
USP29-202ENST00000598197 PEG3Q9GZU2 1588 aa8.03□□□□□ -1.12
USP29-202ENST00000598197 SMARCA4P51532 1647 aa7.97□□□□□ -1.13
USP29-202ENST00000598197 MROH2BQ7Z745 1585 aa7.96□□□□□ -1.14
USP29-202ENST00000598197 TOP2AP11388 1531 aaKnown RBP7.95□□□□□ -1.14
USP29-202ENST00000598197 WIZO95785 1651 aa7.94□□□□□ -1.14
USP29-202ENST00000598197 RTN4Q9NQC3 1192 aaKnown RBP7.94□□□□□ -1.14
USP29-202ENST00000598197 SUPT5HO00267 1087 aaKnown RBP7.93□□□□□ -1.14
USP29-202ENST00000598197 BICRAQ9NZM4 1560 aa7.93□□□□□ -1.14
USP29-202ENST00000598197 CECR2Q9BXF3 1484 aa7.89□□□□□ -1.15
USP29-202ENST00000598197 KCNA4P22459 653 aa7.88□□□□□ -1.15
USP29-202ENST00000598197 SMARCA2P51531 1590 aa7.87□□□□□ -1.15
USP29-202ENST00000598197 CSRNP3Q8WYN3 585 aa7.82□□□□□ -1.16
USP29-202ENST00000598197 PRDM2Q13029 1718 aa7.79□□□□□ -1.16
USP29-202ENST00000598197 DCAF8L2P0C7V8 631 aa7.77□□□□□ -1.17
USP29-202ENST00000598197 CCDC88BA6NC98 1476 aa7.74□□□□□ -1.17
USP29-202ENST00000598197 HMGXB3Q12766 1538 aa7.73□□□□□ -1.17
USP29-202ENST00000598197 EEA1Q15075 1411 aa7.73□□□□□ -1.17
USP29-202ENST00000598197 BIVM-ERCC5R4GMW8 1640 aa7.72□□□□□ -1.17
USP29-202ENST00000598197 KIF21BO75037 1637 aa7.7□□□□□ -1.18
USP29-202ENST00000598197 WRNQ14191 1432 aaPredicted RBP eCLIP7.7□□□□□ -1.18
USP29-202ENST00000598197 HRCP23327 699 aa7.67□□□□□ -1.18
USP29-202ENST00000598197 ATAD2BQ9ULI0 1458 aa7.66□□□□□ -1.18
USP29-202ENST00000598197 TOP2BQ02880 1626 aa7.65□□□□□ -1.19
USP29-202ENST00000598197 NCAPD3P42695 1498 aa7.62□□□□□ -1.19
USP29-202ENST00000598197 SYNJ1O43426 1573 aa7.61□□□□□ -1.19
USP29-202ENST00000598197 BAZ1BQ9UIG0 1483 aaKnown RBP7.61□□□□□ -1.19
USP29-202ENST00000598197 PRKCSHP14314 528 aaPredicted RBP7.61□□□□□ -1.19
USP29-202ENST00000598197 ABCC8Q09428 1581 aa7.6□□□□□ -1.19
USP29-202ENST00000598197 ERICH3Q5RHP9 1530 aa7.58□□□□□ -1.2
USP29-202ENST00000598197 ADRA2BP18089 450 aa7.58□□□□□ -1.2
USP29-202ENST00000598197 TRIM26Q12899 539 aaPredicted RBP7.58□□□□□ -1.2
USP29-202ENST00000598197 TRIM41Q8WV44 630 aa7.58□□□□□ -1.2
USP29-202ENST00000598197 TNIKQ9UKE5 1360 aa7.57□□□□□ -1.2
USP29-202ENST00000598197 GOLGA3Q08378 1498 aa7.53□□□□□ -1.2
USP29-202ENST00000598197 LOC105371045A0A1W2PR82 267 aa7.53□□□□□ -1.2
USP29-202ENST00000598197 CEP164Q9UPV0 1460 aa7.52□□□□□ -1.21
USP29-202ENST00000598197 CFTRP13569 1480 aa7.51□□□□□ -1.21
USP29-202ENST00000598197 ZEB1P37275 1124 aaPredicted RBP7.48□□□□□ -1.21
USP29-202ENST00000598197 CEP162Q5TB80 1403 aa7.48□□□□□ -1.21
USP29-202ENST00000598197 PRXQ9BXM0 1461 aa7.47□□□□□ -1.21
USP29-202ENST00000598197 SOGA1O94964 1423 aa7.47□□□□□ -1.21
USP29-202ENST00000598197 WDR97A6NE52 1622 aa7.46□□□□□ -1.22
USP29-202ENST00000598197 AMER1Q5JTC6 1135 aaPredicted RBP7.46□□□□□ -1.22
USP29-202ENST00000598197 CUX1P39880 1505 aa7.45□□□□□ -1.22
USP29-202ENST00000598197 SLC4A1APQ9BWU0 796 aaKnown RBP7.45□□□□□ -1.22
USP29-202ENST00000598197 MAP3K1Q13233 1512 aa7.44□□□□□ -1.22
USP29-202ENST00000598197 PCGF6Q9BYE7 350 aa7.44□□□□□ -1.22
USP29-202ENST00000598197 RUSC2Q8N2Y8 1516 aa7.44□□□□□ -1.22
USP29-202ENST00000598197 CC2D2AQ9P2K1 1620 aa7.4□□□□□ -1.22
USP29-202ENST00000598197 SENP3Q9H4L4 574 aaPredicted RBP7.4□□□□□ -1.22
USP29-202ENST00000598197 VPS8Q8N3P4 1428 aa7.4□□□□□ -1.23
USP29-202ENST00000598197 CUX2O14529 1486 aa7.39□□□□□ -1.23
USP29-202ENST00000598197 CUL7Q14999 1698 aa7.38□□□□□ -1.23
USP29-202ENST00000598197 KIF21AQ7Z4S6 1674 aa7.38□□□□□ -1.23
USP29-202ENST00000598197 CFAP43Q8NDM7 1665 aa7.38□□□□□ -1.23
USP29-202ENST00000598197 NCBP3Q53F19 620 aaKnown RBP7.37□□□□□ -1.23
USP29-202ENST00000598197 DNMBPQ6XZF7 1577 aa7.37□□□□□ -1.23
USP29-202ENST00000598197 CTTNBP2Q8WZ74 1663 aa7.36□□□□□ -1.23
USP29-202ENST00000598197 LAMC3Q9Y6N6 1575 aa7.36□□□□□ -1.23
USP29-202ENST00000598197 RAPGEF2Q9Y4G8 1499 aa7.36□□□□□ -1.23
USP29-202ENST00000598197 ARAP1Q96P48 1450 aa7.35□□□□□ -1.23
USP29-202ENST00000598197 ZBTB22O15209 634 aa7.35□□□□□ -1.23
USP29-202ENST00000598197 CLIP1P30622 1438 aa7.34□□□□□ -1.24
USP29-202ENST00000598197 ABCA5Q8WWZ7 1642 aa7.33□□□□□ -1.24
USP29-202ENST00000598197 ABCA10Q8WWZ4 1543 aa7.32□□□□□ -1.24
USP29-202ENST00000598197 KIF27Q86VH2 1401 aa7.32□□□□□ -1.24
USP29-202ENST00000598197 EFCAB5A4FU69 1503 aa7.31□□□□□ -1.24
USP29-202ENST00000598197 CADPSQ9ULU8 1353 aa7.31□□□□□ -1.24
USP29-202ENST00000598197 RRBP1Q9P2E9 1410 aaKnown RBP7.3□□□□□ -1.24
USP29-202ENST00000598197 PABPN1Q86U42 306 aaKnown RBP eCLIP7.3□□□□□ -1.24
USP29-202ENST00000598197 AQRO60306 1485 aaKnown RBP eCLIP7.3□□□□□ -1.24
USP29-202ENST00000598197 THOC2Q8NI27 1593 aaKnown RBP7.29□□□□□ -1.24
USP29-202ENST00000598197 SAMD9Q5K651 1589 aa7.29□□□□□ -1.24
USP29-202ENST00000598197 TIAM1Q13009 1591 aa7.27□□□□□ -1.25
USP29-202ENST00000598197 ARHGAP35Q9NRY4 1499 aa7.27□□□□□ -1.25
USP29-202ENST00000598197 CLSPNQ9HAW4 1339 aa7.26□□□□□ -1.25
USP29-202ENST00000598197 FGD5Q6ZNL6 1462 aa7.26□□□□□ -1.25
USP29-202ENST00000598197 TARBP1Q13395 1621 aaKnown RBP7.25□□□□□ -1.25
USP29-202ENST00000598197 TOPBP1Q92547 1522 aa7.24□□□□□ -1.25
USP29-202ENST00000598197 LRRIQ1Q96JM4 1722 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms