RNA–Protein interactions for RNA: ENST00000595652.5

SCN1B-203, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 2 BASIC

Gene SCN1B, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-203ENST00000595652 CTTNBP2Q8WZ74 1663 aa34.63■■■■□ 3.13
SCN1B-203ENST00000595652 UBTFP17480 764 aaKnown RBP34.57■■■■□ 3.12
SCN1B-203ENST00000595652 KIAA0586Q9BVV6 1533 aa34.56■■■■□ 3.12
SCN1B-203ENST00000595652 IQGAP2Q13576 1575 aa34.52■■■■□ 3.12
SCN1B-203ENST00000595652 LOC105371045A0A1W2PR82 267 aa34.49■■■■□ 3.11
SCN1B-203ENST00000595652 SHROOM2Q13796 1616 aa34.42■■■■□ 3.1
SCN1B-203ENST00000595652 JPH4Q96JJ6 628 aa34.41■■■■□ 3.1
SCN1B-203ENST00000595652 RANGAP1P46060 587 aaPredicted RBP34.38■■■■□ 3.09
SCN1B-203ENST00000595652 PRG4Q92954 1404 aaPredicted RBP34.32■■■■□ 3.08
SCN1B-203ENST00000595652 TNIKQ9UKE5 1360 aa34.32■■■■□ 3.08
SCN1B-203ENST00000595652 UGGT2Q9NYU1 1516 aa34.31■■■■□ 3.08
SCN1B-203ENST00000595652 ERCC6L2Q5T890 1561 aa34.31■■■■□ 3.08
SCN1B-203ENST00000595652 DNAJC5Q9H3Z4 198 aa34.28■■■■□ 3.08
SCN1B-203ENST00000595652 ARHGEF11O15085 1522 aa34.26■■■■□ 3.08
SCN1B-203ENST00000595652 RIMBP3CA6NJZ7 1639 aa34.23■■■■□ 3.07
SCN1B-203ENST00000595652 RIMBP3BA6NNM3 1639 aa34.23■■■■□ 3.07
SCN1B-203ENST00000595652 RIMBP3Q9UFD9 1639 aa34.23■■■■□ 3.07
SCN1B-203ENST00000595652 DISP1Q96F81 1524 aa34.2■■■■□ 3.07
SCN1B-203ENST00000595652 KIAA0556O60303 1618 aa34.19■■■■□ 3.06
SCN1B-203ENST00000595652 CARMIL2Q6F5E8 1435 aa34.19■■■■□ 3.06
SCN1B-203ENST00000595652 SAMD9Q5K651 1589 aa34.15■■■■□ 3.06
SCN1B-203ENST00000595652 P3H3Q8IVL6 736 aa34.15■■■■□ 3.06
SCN1B-203ENST00000595652 TTBK1Q5TCY1 1321 aaPredicted RBP34.11■■■■□ 3.05
SCN1B-203ENST00000595652 EFCAB5A4FU69 1503 aa34.1■■■■□ 3.05
SCN1B-203ENST00000595652 CEP162Q5TB80 1403 aa34.08■■■■□ 3.05
SCN1B-203ENST00000595652 CLIP1P30622 1438 aa34.07■■■■□ 3.04
SCN1B-203ENST00000595652 ARHGAP35Q9NRY4 1499 aa34.07■■■■□ 3.04
SCN1B-203ENST00000595652 ARAP1Q96P48 1450 aa34.04■■■■□ 3.04
SCN1B-203ENST00000595652 FHOD3Q2V2M9 1422 aa34.04■■■■□ 3.04
SCN1B-203ENST00000595652 PTPRGP23470 1445 aa33.97■■■■□ 3.03
SCN1B-203ENST00000595652 CYB5RLQ6IPT4 315 aa33.94■■■■□ 3.02
SCN1B-203ENST00000595652 PLB1Q6P1J6 1458 aa33.8■■■■□ 3
SCN1B-203ENST00000595652 FMN1Q68DA7 1419 aa33.77■■■■□ 3
SCN1B-203ENST00000595652 UACAQ9BZF9 1416 aa33.76■■■□□ 2.99
SCN1B-203ENST00000595652 ABCA8O94911 1581 aa33.76■■■□□ 2.99
SCN1B-203ENST00000595652 RAPGEF6Q8TEU7 1601 aa33.74■■■□□ 2.99
SCN1B-203ENST00000595652 ADCY10Q96PN6 1610 aa33.73■■■□□ 2.99
SCN1B-203ENST00000595652 ABCC2Q92887 1545 aa33.7■■■□□ 2.99
SCN1B-203ENST00000595652 PCF11O94913 1555 aaKnown RBP33.67■■■□□ 2.98
SCN1B-203ENST00000595652 ATP1B4Q9UN42 357 aaPredicted RBP33.66■■■□□ 2.98
SCN1B-203ENST00000595652 UHRF1BP1LA0JNW5 1464 aa33.65■■■□□ 2.98
SCN1B-203ENST00000595652 ARID3CA6NKF2 412 aa33.63■■■□□ 2.97
SCN1B-203ENST00000595652 VPS8Q8N3P4 1428 aa33.6■■■□□ 2.97
SCN1B-203ENST00000595652 HECW1Q76N89 1606 aa33.6■■■□□ 2.97
SCN1B-203ENST00000595652 CASKIN1Q8WXD9 1431 aa33.59■■■□□ 2.97
SCN1B-203ENST00000595652 NUP153P49790 1475 aaKnown RBP33.58■■■□□ 2.97
SCN1B-203ENST00000595652 FYCO1Q9BQS8 1478 aa33.55■■■□□ 2.96
SCN1B-203ENST00000595652 ZCCHC11Q5TAX3 1644 aaKnown RBP33.53■■■□□ 2.96
SCN1B-203ENST00000595652 NPM1P06748 294 aaKnown RBP eCLIP33.53■■■□□ 2.96
SCN1B-203ENST00000595652 LRRIQ1Q96JM4 1722 aa33.53■■■□□ 2.96
SCN1B-203ENST00000595652 KDM5BQ9UGL1 1544 aa33.5■■■□□ 2.95
SCN1B-203ENST00000595652 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.48■■■□□ 2.95
SCN1B-203ENST00000595652 HNRNPUL2Q1KMD3 747 aaKnown RBP33.48■■■□□ 2.95
SCN1B-203ENST00000595652 ATP10BO94823 1461 aa33.48■■■□□ 2.95
SCN1B-203ENST00000595652 CDK13Q14004 1512 aaKnown RBP33.48■■■□□ 2.95
SCN1B-203ENST00000595652 EPRSP07814 1512 aaKnown RBP33.46■■■□□ 2.95
SCN1B-203ENST00000595652 CCDC18Q5T9S5 1454 aa33.38■■■□□ 2.93
SCN1B-203ENST00000595652 ASXL2Q76L83 1435 aa33.33■■■□□ 2.93
SCN1B-203ENST00000595652 MAPKBP1O60336 1514 aa33.33■■■□□ 2.93
SCN1B-203ENST00000595652 CFAP43Q8NDM7 1665 aa33.3■■■□□ 2.92
SCN1B-203ENST00000595652 TIAM1Q13009 1591 aa33.27■■■□□ 2.92
SCN1B-203ENST00000595652 APLP2Q06481 763 aa33.26■■■□□ 2.91
SCN1B-203ENST00000595652 WDR7Q9Y4E6 1490 aa33.25■■■□□ 2.91
SCN1B-203ENST00000595652 PLEKHD1A6NEE1 506 aa33.24■■■□□ 2.91
SCN1B-203ENST00000595652 CDK11AQ9UQ88 783 aaPredicted RBP33.23■■■□□ 2.91
SCN1B-203ENST00000595652 MAGI3Q5TCQ9 1506 aa33.21■■■□□ 2.91
SCN1B-203ENST00000595652 KCNH8Q96L42 1107 aa33.2■■■□□ 2.91
SCN1B-203ENST00000595652 MAP3K1Q13233 1512 aa33.17■■■□□ 2.9
SCN1B-203ENST00000595652 TROQ12816 1431 aaPredicted RBP33.15■■■□□ 2.9
SCN1B-203ENST00000595652 MTUS2Q5JR59 1369 aa33.14■■■□□ 2.9
SCN1B-203ENST00000595652 DIP2BQ9P265 1576 aa33.12■■■□□ 2.89
SCN1B-203ENST00000595652 KANK4Q5T7N3 995 aaPredicted RBP33.1■■■□□ 2.89
SCN1B-203ENST00000595652 ABCC10Q5T3U5 1492 aa33.1■■■□□ 2.89
SCN1B-203ENST00000595652 KIF14Q15058 1648 aa33.1■■■□□ 2.89
SCN1B-203ENST00000595652 KIF13AQ9H1H9 1805 aa33.09■■■□□ 2.89
SCN1B-203ENST00000595652 EHBP1L1Q8N3D4 1523 aa33.09■■■□□ 2.89
SCN1B-203ENST00000595652 LRRC9Q6ZRR7 1453 aa33.09■■■□□ 2.89
SCN1B-203ENST00000595652 TRHP20396 242 aaPredicted RBP33.07■■■□□ 2.88
SCN1B-203ENST00000595652 FAM69CQ0P6D2 419 aa33.07■■■□□ 2.88
SCN1B-203ENST00000595652 PPARGC1BQ86YN6 1023 aaKnown RBP33.03■■■□□ 2.88
SCN1B-203ENST00000595652 GLI2P10070 1586 aa33.01■■■□□ 2.88
SCN1B-203ENST00000595652 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33■■■□□ 2.87
SCN1B-203ENST00000595652 TTC37Q6PGP7 1564 aa32.99■■■□□ 2.87
SCN1B-203ENST00000595652 SUPT6HQ7KZ85 1726 aaKnown RBP32.99■■■□□ 2.87
SCN1B-203ENST00000595652 ABCA9Q8IUA7 1624 aa32.98■■■□□ 2.87
SCN1B-203ENST00000595652 TSPOAP1O95153 1857 aa32.95■■■□□ 2.86
SCN1B-203ENST00000595652 MAP3K4Q9Y6R4 1608 aa32.92■■■□□ 2.86
SCN1B-203ENST00000595652 NCOA2Q15596 1464 aa32.91■■■□□ 2.86
SCN1B-203ENST00000595652 CD109Q6YHK3 1445 aa32.88■■■□□ 2.85
SCN1B-203ENST00000595652 MYO5CQ9NQX4 1742 aa32.88■■■□□ 2.85
SCN1B-203ENST00000595652 CDC42BPAQ5VT25 1732 aa32.85■■■□□ 2.85
SCN1B-203ENST00000595652 CCNB3Q8WWL7 1395 aa32.83■■■□□ 2.85
SCN1B-203ENST00000595652 PPRC1Q5VV67 1664 aaKnown RBP32.81■■■□□ 2.84
SCN1B-203ENST00000595652 PREX2Q70Z35 1606 aa32.79■■■□□ 2.84
SCN1B-203ENST00000595652 CDC42BPBQ9Y5S2 1711 aa32.79■■■□□ 2.84
SCN1B-203ENST00000595652 GPATCH8Q9UKJ3 1502 aaKnown RBP32.77■■■□□ 2.84
SCN1B-203ENST00000595652 ITSN2Q9NZM3 1697 aa32.77■■■□□ 2.84
SCN1B-203ENST00000595652 PLCH2O75038 1416 aa32.76■■■□□ 2.83
SCN1B-203ENST00000595652 ARHGAP5Q13017 1502 aa32.75■■■□□ 2.83
SCN1B-203ENST00000595652 PHLDB1Q86UU1 1377 aa32.73■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms