RNA–Protein interactions for RNA: ENST00000593832.1

COLGALT1-202, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

TSL 2

Gene COLGALT1, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-202ENST00000593832 MAPKBP1O60336 1514 aa20.27■□□□□ 0.83
COLGALT1-202ENST00000593832 CCDC136Q96JN2 1154 aa20.26■□□□□ 0.83
COLGALT1-202ENST00000593832 BCANQ96GW7 911 aa20.25■□□□□ 0.83
COLGALT1-202ENST00000593832 RAB3GAP2Q9H2M9 1393 aa20.23■□□□□ 0.83
COLGALT1-202ENST00000593832 FKBP8Q14318 412 aa20.2■□□□□ 0.82
COLGALT1-202ENST00000593832 ITGAEP38570 1179 aa20.2■□□□□ 0.82
COLGALT1-202ENST00000593832 ARHGAP35Q9NRY4 1499 aa20.2■□□□□ 0.82
COLGALT1-202ENST00000593832 FGD5Q6ZNL6 1462 aa20.19■□□□□ 0.82
COLGALT1-202ENST00000593832 KIF27Q86VH2 1401 aa20.18■□□□□ 0.82
COLGALT1-202ENST00000593832 DDX10Q13206 875 aaKnown RBP20.15■□□□□ 0.82
COLGALT1-202ENST00000593832 WDR97A6NE52 1622 aa20.14■□□□□ 0.81
COLGALT1-202ENST00000593832 LAMC3Q9Y6N6 1575 aa20.12■□□□□ 0.81
COLGALT1-202ENST00000593832 PPP1R15AO75807 674 aaPredicted RBP20.12■□□□□ 0.81
COLGALT1-202ENST00000593832 SALL2Q9Y467 1007 aaPredicted RBP20.11■□□□□ 0.81
COLGALT1-202ENST00000593832 SETD5Q9C0A6 1442 aa20.1■□□□□ 0.81
COLGALT1-202ENST00000593832 RBM19Q9Y4C8 960 aaKnown RBP20.09■□□□□ 0.81
COLGALT1-202ENST00000593832 RAD54L2Q9Y4B4 1467 aa20.09■□□□□ 0.81
COLGALT1-202ENST00000593832 SIN3AQ96ST3 1273 aa20.08■□□□□ 0.8
COLGALT1-202ENST00000593832 TOPBP1Q92547 1522 aa20.07■□□□□ 0.8
COLGALT1-202ENST00000593832 DNMBPQ6XZF7 1577 aa20.06■□□□□ 0.8
COLGALT1-202ENST00000593832 MAP3K1Q13233 1512 aa20.06■□□□□ 0.8
COLGALT1-202ENST00000593832 TIAM1Q13009 1591 aa20.05■□□□□ 0.8
COLGALT1-202ENST00000593832 PDS5BQ9NTI5 1447 aa20.04■□□□□ 0.8
COLGALT1-202ENST00000593832 KIF21AQ7Z4S6 1674 aa20.03■□□□□ 0.8
COLGALT1-202ENST00000593832 POLA1P09884 1462 aaPredicted RBP20.03■□□□□ 0.8
COLGALT1-202ENST00000593832 CCER2I3L3R5 266 aa20.03■□□□□ 0.8
COLGALT1-202ENST00000593832 URB2Q14146 1524 aaKnown RBP20.02■□□□□ 0.8
COLGALT1-202ENST00000593832 NEFLP07196 543 aa20.02■□□□□ 0.8
COLGALT1-202ENST00000593832 TIMELESSQ9UNS1 1208 aa20■□□□□ 0.79
COLGALT1-202ENST00000593832 PHLDB1Q86UU1 1377 aa20■□□□□ 0.79
COLGALT1-202ENST00000593832 TRIM52Q96A61 297 aa20■□□□□ 0.79
COLGALT1-202ENST00000593832 LRRC9Q6ZRR7 1453 aa19.99■□□□□ 0.79
COLGALT1-202ENST00000593832 IGF1RP08069 1367 aa19.99■□□□□ 0.79
COLGALT1-202ENST00000593832 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.97■□□□□ 0.79
COLGALT1-202ENST00000593832 HIRIP3Q9BW71 556 aaPredicted RBP19.96■□□□□ 0.79
COLGALT1-202ENST00000593832 ANP32CO43423 234 aa19.94■□□□□ 0.78
COLGALT1-202ENST00000593832 MSH5O43196 834 aa19.93■□□□□ 0.78
COLGALT1-202ENST00000593832 CARMIL1Q5VZK9 1371 aa19.93■□□□□ 0.78
COLGALT1-202ENST00000593832 FAM50AQ14320 339 aaKnown RBP19.91■□□□□ 0.78
COLGALT1-202ENST00000593832 TDRD9Q8NDG6 1382 aaKnown RBP19.91■□□□□ 0.78
COLGALT1-202ENST00000593832 DEKP35659 375 aaKnown RBP19.89■□□□□ 0.77
COLGALT1-202ENST00000593832 ABCA10Q8WWZ4 1543 aa19.88■□□□□ 0.77
COLGALT1-202ENST00000593832 RTN4Q9NQC3 1192 aaKnown RBP19.86■□□□□ 0.77
COLGALT1-202ENST00000593832 CFAP43Q8NDM7 1665 aa19.84■□□□□ 0.77
COLGALT1-202ENST00000593832 FHAD1B1AJZ9 1412 aa19.82■□□□□ 0.76
COLGALT1-202ENST00000593832 P3H3Q8IVL6 736 aa19.8■□□□□ 0.76
COLGALT1-202ENST00000593832 PCF11O94913 1555 aaKnown RBP19.8■□□□□ 0.76
COLGALT1-202ENST00000593832 FANCIQ9NVI1 1328 aa19.79■□□□□ 0.76
COLGALT1-202ENST00000593832 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.78■□□□□ 0.762e-7■■□□□ 11.7
COLGALT1-202ENST00000593832 ERCC6Q03468 1493 aa19.77■□□□□ 0.76
COLGALT1-202ENST00000593832 MRC2Q9UBG0 1479 aa19.76■□□□□ 0.75
COLGALT1-202ENST00000593832 GAPVD1Q14C86 1478 aa19.75■□□□□ 0.75
COLGALT1-202ENST00000593832 TONSLQ96HA7 1378 aa19.75■□□□□ 0.75
COLGALT1-202ENST00000593832 UBE2Q2Q8WVN8 375 aa19.74■□□□□ 0.75
COLGALT1-202ENST00000593832 HNRNPUQ00839 825 aaKnown RBP eCLIP19.71■□□□□ 0.75
COLGALT1-202ENST00000593832 AQRO60306 1485 aaKnown RBP eCLIP19.71■□□□□ 0.751e-8■■■■□ 22.6
COLGALT1-202ENST00000593832 CDK11AQ9UQ88 783 aaPredicted RBP19.7■□□□□ 0.74
COLGALT1-202ENST00000593832 ATP1B4Q9UN42 357 aaPredicted RBP19.69■□□□□ 0.74
COLGALT1-202ENST00000593832 ABCA5Q8WWZ7 1642 aa19.69■□□□□ 0.74
COLGALT1-202ENST00000593832 TARBP1Q13395 1621 aaKnown RBP19.69■□□□□ 0.74
COLGALT1-202ENST00000593832 IRX6P78412 446 aaPredicted RBP19.69■□□□□ 0.74
COLGALT1-202ENST00000593832 EIF5BO60841 1220 aaKnown RBP19.69■□□□□ 0.74
COLGALT1-202ENST00000593832 CCDC18Q5T9S5 1454 aa19.68■□□□□ 0.74
COLGALT1-202ENST00000593832 FYCO1Q9BQS8 1478 aa19.68■□□□□ 0.74
COLGALT1-202ENST00000593832 CUL7Q14999 1698 aa19.68■□□□□ 0.74
COLGALT1-202ENST00000593832 UACAQ9BZF9 1416 aa19.67■□□□□ 0.74
COLGALT1-202ENST00000593832 KDM5BQ9UGL1 1544 aa19.67■□□□□ 0.74
COLGALT1-202ENST00000593832 FHOD3Q2V2M9 1422 aa19.66■□□□□ 0.74
COLGALT1-202ENST00000593832 PLEKHG5O94827 1062 aa19.66■□□□□ 0.74
COLGALT1-202ENST00000593832 NBR1Q14596 966 aa19.66■□□□□ 0.74
COLGALT1-202ENST00000593832 FGD6Q6ZV73 1430 aa19.66■□□□□ 0.74
COLGALT1-202ENST00000593832 HFM1A2PYH4 1435 aa19.65■□□□□ 0.74
COLGALT1-202ENST00000593832 CASKIN1Q8WXD9 1431 aa19.65■□□□□ 0.74
COLGALT1-202ENST00000593832 PTPRKQ15262 1439 aa19.65■□□□□ 0.74
COLGALT1-202ENST00000593832 ZNF608Q9ULD9 1512 aaPredicted RBP19.63■□□□□ 0.73
COLGALT1-202ENST00000593832 ERICH6BQ5W0A0 696 aa19.62■□□□□ 0.73
COLGALT1-202ENST00000593832 IL27Q8NEV9 243 aa19.62■□□□□ 0.73
COLGALT1-202ENST00000593832 PTPN23Q9H3S7 1636 aa19.61■□□□□ 0.73
COLGALT1-202ENST00000593832 WASHC2AQ641Q2 1341 aa19.6■□□□□ 0.73
COLGALT1-202ENST00000593832 EFCAB5A4FU69 1503 aa19.58■□□□□ 0.73
COLGALT1-202ENST00000593832 WDR62O43379 1518 aa19.58■□□□□ 0.73
COLGALT1-202ENST00000593832 PBRM1Q86U86 1689 aa19.58■□□□□ 0.72
COLGALT1-202ENST00000593832 NAIPQ13075 1403 aa19.57■□□□□ 0.72
COLGALT1-202ENST00000593832 CTTNBP2Q8WZ74 1663 aa19.57■□□□□ 0.72
COLGALT1-202ENST00000593832 PPP4R2Q9NY27 417 aa19.57■□□□□ 0.72
COLGALT1-202ENST00000593832 CCDC184Q52MB2 194 aa19.54■□□□□ 0.72
COLGALT1-202ENST00000593832 HSPA5P11021 654 aaKnown RBP19.53■□□□□ 0.72
COLGALT1-202ENST00000593832 IFT140Q96RY7 1462 aa19.53■□□□□ 0.72
COLGALT1-202ENST00000593832 NCOA2Q15596 1464 aa19.52■□□□□ 0.72
COLGALT1-202ENST00000593832 SNAPC4Q5SXM2 1469 aa19.52■□□□□ 0.72
COLGALT1-202ENST00000593832 THOC2Q8NI27 1593 aaKnown RBP19.51■□□□□ 0.71
COLGALT1-202ENST00000593832 FMN1Q68DA7 1419 aa19.49■□□□□ 0.71
COLGALT1-202ENST00000593832 GRIN2BQ13224 1484 aa19.49■□□□□ 0.71
COLGALT1-202ENST00000593832 MTUS2Q5JR59 1369 aa19.49■□□□□ 0.71
COLGALT1-202ENST00000593832 PKNOX2Q96KN3 472 aa19.49■□□□□ 0.71
COLGALT1-202ENST00000593832 FBLN2P98095 1184 aa19.48■□□□□ 0.71
COLGALT1-202ENST00000593832 CNTLNQ9NXG0 1405 aa19.48■□□□□ 0.71
COLGALT1-202ENST00000593832 MYT1LQ9UL68 1186 aa19.47■□□□□ 0.71
COLGALT1-202ENST00000593832 MYOM3Q5VTT5 1437 aa19.46■□□□□ 0.71
COLGALT1-202ENST00000593832 DENND4BO75064 1496 aaPredicted RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms