RNA–Protein interactions for RNA: ENST00000592208.5

RAVER1-204, Transcript of ribonucleoprotein, PTB binding 1, humanhuman

TSL 1 (best)

Gene RAVER1, Length 4,693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAVER1-204ENST00000592208 CCDC88BA6NC98 1476 aa19.79■□□□□ 0.76
RAVER1-204ENST00000592208 ANP32AP39687 249 aaKnown RBP19.77■□□□□ 0.76
RAVER1-204ENST00000592208 ATAD2BQ9ULI0 1458 aa19.76■□□□□ 0.75
RAVER1-204ENST00000592208 CADPSQ9ULU8 1353 aa19.75■□□□□ 0.75
RAVER1-204ENST00000592208 DDX10Q13206 875 aaKnown RBP19.74■□□□□ 0.75
RAVER1-204ENST00000592208 TOP2AP11388 1531 aaKnown RBP19.73■□□□□ 0.75
RAVER1-204ENST00000592208 SENP3Q9H4L4 574 aaPredicted RBP19.73■□□□□ 0.75
RAVER1-204ENST00000592208 SOGA1O94964 1423 aa19.72■□□□□ 0.75
RAVER1-204ENST00000592208 ARID4BQ4LE39 1312 aaPredicted RBP19.72■□□□□ 0.75
RAVER1-204ENST00000592208 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.72■□□□□ 0.75
RAVER1-204ENST00000592208 BCL11AQ9H165 835 aa19.7■□□□□ 0.74
RAVER1-204ENST00000592208 TDRD9Q8NDG6 1382 aaKnown RBP19.69■□□□□ 0.74
RAVER1-204ENST00000592208 TMC1Q8TDI8 760 aa19.67■□□□□ 0.74
RAVER1-204ENST00000592208 PPP1R15AO75807 674 aaPredicted RBP19.67■□□□□ 0.74
RAVER1-204ENST00000592208 SMARCA4P51532 1647 aa19.67■□□□□ 0.74
RAVER1-204ENST00000592208 UPF2Q9HAU5 1272 aaKnown RBP19.66■□□□□ 0.74
RAVER1-204ENST00000592208 EIF4G1Q04637 1599 aaKnown RBP19.66■□□□□ 0.74
RAVER1-204ENST00000592208 RGL3Q3MIN7 710 aa19.66■□□□□ 0.74
RAVER1-204ENST00000592208 HNRNPUQ00839 825 aaKnown RBP eCLIP19.64■□□□□ 0.73
RAVER1-204ENST00000592208 WDR43Q15061 677 aaKnown RBP eCLIP19.61■□□□□ 0.73
RAVER1-204ENST00000592208 EIF4G2P78344 907 aaKnown RBP eCLIP19.6■□□□□ 0.73
RAVER1-204ENST00000592208 HIRIP3Q9BW71 556 aaPredicted RBP19.6■□□□□ 0.73
RAVER1-204ENST00000592208 FHAD1B1AJZ9 1412 aa19.59■□□□□ 0.73
RAVER1-204ENST00000592208 ABCC8Q09428 1581 aa19.59■□□□□ 0.73
RAVER1-204ENST00000592208 FAM9BQ8IZU0 186 aa19.59■□□□□ 0.73
RAVER1-204ENST00000592208 TRHP20396 242 aaPredicted RBP19.58■□□□□ 0.73
RAVER1-204ENST00000592208 CCNB3Q8WWL7 1395 aa19.57■□□□□ 0.72
RAVER1-204ENST00000592208 CDCA8Q53HL2 280 aa19.56■□□□□ 0.72
RAVER1-204ENST00000592208 SALL2Q9Y467 1007 aaPredicted RBP19.56■□□□□ 0.72
RAVER1-204ENST00000592208 WIZO95785 1651 aa19.54■□□□□ 0.72
RAVER1-204ENST00000592208 SCAF1Q9H7N4 1312 aaKnown RBP19.53■□□□□ 0.72
RAVER1-204ENST00000592208 NCAPD3P42695 1498 aa19.53■□□□□ 0.72
RAVER1-204ENST00000592208 C14orf37Q86TY3 774 aa19.52■□□□□ 0.72
RAVER1-204ENST00000592208 ANP32BQ92688 251 aaKnown RBP19.51■□□□□ 0.71
RAVER1-204ENST00000592208 MRS2Q9HD23 443 aa19.51■□□□□ 0.71
RAVER1-204ENST00000592208 FKBP8Q14318 412 aa19.5■□□□□ 0.71
RAVER1-204ENST00000592208 HSP90AA1P07900 732 aaKnown RBP19.49■□□□□ 0.71
RAVER1-204ENST00000592208 CARMIL2Q6F5E8 1435 aa19.49■□□□□ 0.71
RAVER1-204ENST00000592208 PLEKHG5O94827 1062 aa19.48■□□□□ 0.71
RAVER1-204ENST00000592208 CCDC136Q96JN2 1154 aa19.45■□□□□ 0.7
RAVER1-204ENST00000592208 MLECQ14165 292 aa19.42■□□□□ 0.7
RAVER1-204ENST00000592208 FANCD2Q9BXW9 1451 aa19.4■□□□□ 0.7
RAVER1-204ENST00000592208 CFAP53Q96M91 514 aa19.39■□□□□ 0.69
RAVER1-204ENST00000592208 MYH16Q9H6N6 1097 aa19.39■□□□□ 0.69
RAVER1-204ENST00000592208 ZBTB7CA1YPR0 619 aa19.38■□□□□ 0.69
RAVER1-204ENST00000592208 CARD11Q9BXL7 1154 aa19.38■□□□□ 0.69
RAVER1-204ENST00000592208 SIN3AQ96ST3 1273 aa19.37■□□□□ 0.69
RAVER1-204ENST00000592208 NPM2Q86SE8 214 aaKnown RBP19.37■□□□□ 0.69
RAVER1-204ENST00000592208 VPS8Q8N3P4 1428 aa19.36■□□□□ 0.69
RAVER1-204ENST00000592208 TIMELESSQ9UNS1 1208 aa19.36■□□□□ 0.69
RAVER1-204ENST00000592208 EIF5BO60841 1220 aaKnown RBP19.35■□□□□ 0.69
RAVER1-204ENST00000592208 KANK4Q5T7N3 995 aaPredicted RBP19.34■□□□□ 0.69
RAVER1-204ENST00000592208 A0A0G2JS52 829 aa19.33■□□□□ 0.69
RAVER1-204ENST00000592208 GGT6Q6P531 493 aa19.33■□□□□ 0.69
RAVER1-204ENST00000592208 JPH4Q96JJ6 628 aa19.33■□□□□ 0.69
RAVER1-204ENST00000592208 FMN1Q68DA7 1419 aa19.31■□□□□ 0.68
RAVER1-204ENST00000592208 EFCAB2Q5VUJ9 269 aa19.31■□□□□ 0.68
RAVER1-204ENST00000592208 POGKQ9P215 609 aa19.3■□□□□ 0.68
RAVER1-204ENST00000592208 KNSTRNQ9Y448 316 aa19.29■□□□□ 0.68
RAVER1-204ENST00000592208 KANK1Q14678 1352 aa19.29■□□□□ 0.68
RAVER1-204ENST00000592208 RAPGEF2Q9Y4G8 1499 aa19.28■□□□□ 0.68
RAVER1-204ENST00000592208 MIER1Q8N108 512 aa19.27■□□□□ 0.67
RAVER1-204ENST00000592208 HAP1P54257 671 aaPredicted RBP19.26■□□□□ 0.67
RAVER1-204ENST00000592208 ARHGAP35Q9NRY4 1499 aa19.26■□□□□ 0.67
RAVER1-204ENST00000592208 DCAF11Q8TEB1 546 aa19.24■□□□□ 0.67
RAVER1-204ENST00000592208 PPM1GO15355 546 aaPredicted RBP19.23■□□□□ 0.67
RAVER1-204ENST00000592208 FHOD3Q2V2M9 1422 aa19.23■□□□□ 0.67
RAVER1-204ENST00000592208 HDGFP51858 240 aaKnown RBP19.22■□□□□ 0.67
RAVER1-204ENST00000592208 NUDCQ9Y266 331 aa19.22■□□□□ 0.67
RAVER1-204ENST00000592208 LMOD2Q6P5Q4 547 aa19.21■□□□□ 0.67
RAVER1-204ENST00000592208 HMGXB3Q12766 1538 aa19.2■□□□□ 0.66
RAVER1-204ENST00000592208 CHMP4BQ9H444 224 aaKnown RBP19.2■□□□□ 0.66
RAVER1-204ENST00000592208 PKD2Q13563 968 aa19.19■□□□□ 0.66
RAVER1-204ENST00000592208 ANP32EQ9BTT0 268 aa19.18■□□□□ 0.66
RAVER1-204ENST00000592208 PNNQ9H307 717 aaKnown RBP19.16■□□□□ 0.66
RAVER1-204ENST00000592208 DDRGK1Q96HY6 314 aa19.15■□□□□ 0.66
RAVER1-204ENST00000592208 BECN1Q14457 450 aa19.15■□□□□ 0.66
RAVER1-204ENST00000592208 CC2D2AQ9P2K1 1620 aa19.15■□□□□ 0.66
RAVER1-204ENST00000592208 SETD5Q9C0A6 1442 aa19.14■□□□□ 0.65
RAVER1-204ENST00000592208 SENP3-EIF4A1A0A087X0R7 540 aa19.14■□□□□ 0.65
RAVER1-204ENST00000592208 FOXD1Q16676 465 aa19.14■□□□□ 0.65
RAVER1-204ENST00000592208 MS4A1P11836 297 aa19.13■□□□□ 0.65
RAVER1-204ENST00000592208 CYB5RLQ6IPT4 315 aa19.13■□□□□ 0.65
RAVER1-204ENST00000592208 HNRNPMP52272 730 aaKnown RBP eCLIP19.13■□□□□ 0.65
RAVER1-204ENST00000592208 OSCARQ8IYS5 282 aa19.13■□□□□ 0.65
RAVER1-204ENST00000592208 KIF3BO15066 747 aa19.12■□□□□ 0.65
RAVER1-204ENST00000592208 NUP155O75694 1391 aa19.11■□□□□ 0.65
RAVER1-204ENST00000592208 MAPK8IP3Q9UPT6 1336 aa19.11■□□□□ 0.65
RAVER1-204ENST00000592208 RUSC2Q8N2Y8 1516 aa19.1■□□□□ 0.65
RAVER1-204ENST00000592208 SAFB2Q14151 953 aaKnown RBP eCLIP19.1■□□□□ 0.65
RAVER1-204ENST00000592208 ANKRD30AQ9BXX3 1397 aa19.1■□□□□ 0.65
RAVER1-204ENST00000592208 TNNT2P45379 298 aaPredicted RBP19.09■□□□□ 0.65
RAVER1-204ENST00000592208 PTPRGP23470 1445 aa19.08■□□□□ 0.64
RAVER1-204ENST00000592208 SPAG9O60271 1321 aaKnown RBP19.08■□□□□ 0.64
RAVER1-204ENST00000592208 TMF1P82094 1093 aa19.07■□□□□ 0.64
RAVER1-204ENST00000592208 CFTRP13569 1480 aa19.07■□□□□ 0.64
RAVER1-204ENST00000592208 FGD5Q6ZNL6 1462 aa19.06■□□□□ 0.64
RAVER1-204ENST00000592208 SRPK2P78362 688 aaKnown RBP19.05■□□□□ 0.64
RAVER1-204ENST00000592208 NEUROD2Q15784 382 aa19.05■□□□□ 0.64
RAVER1-204ENST00000592208 MPHOSPH9Q99550 1183 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms