RNA–Protein interactions for RNA: ENST00000592159.1

KDM4B-209, Transcript of lysine demethylase 4B, humanhuman

TSL 3

Gene KDM4B, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-209ENST00000592159 SHROOM2Q13796 1616 aa16.25■□□□□ 0.19
KDM4B-209ENST00000592159 FAM69CQ0P6D2 419 aa16.24■□□□□ 0.19
KDM4B-209ENST00000592159 KIF13AQ9H1H9 1805 aa16.17■□□□□ 0.18
KDM4B-209ENST00000592159 TTBK1Q5TCY1 1321 aaPredicted RBP16.13■□□□□ 0.17
KDM4B-209ENST00000592159 ABCC10Q5T3U5 1492 aa16.11■□□□□ 0.17
KDM4B-209ENST00000592159 IGF1RP08069 1367 aa16.09■□□□□ 0.17
KDM4B-209ENST00000592159 RUSC2Q8N2Y8 1516 aa16.09■□□□□ 0.17
KDM4B-209ENST00000592159 SENP3Q9H4L4 574 aaPredicted RBP16.07■□□□□ 0.16
KDM4B-209ENST00000592159 KIF27Q86VH2 1401 aa16.07■□□□□ 0.16
KDM4B-209ENST00000592159 KIAA0586Q9BVV6 1533 aa16.07■□□□□ 0.16
KDM4B-209ENST00000592159 MAPKBP1O60336 1514 aa16.04■□□□□ 0.16
KDM4B-209ENST00000592159 ADCY10Q96PN6 1610 aa16.04■□□□□ 0.16
KDM4B-209ENST00000592159 PTPRGP23470 1445 aa16.03■□□□□ 0.16
KDM4B-209ENST00000592159 TSPOAP1O95153 1857 aa16.01■□□□□ 0.15
KDM4B-209ENST00000592159 DIP2BQ9P265 1576 aa16.01■□□□□ 0.15
KDM4B-209ENST00000592159 CARMIL1Q5VZK9 1371 aa16■□□□□ 0.15
KDM4B-209ENST00000592159 CARMIL2Q6F5E8 1435 aa15.99■□□□□ 0.15
KDM4B-209ENST00000592159 CUL7Q14999 1698 aa15.99■□□□□ 0.15
KDM4B-209ENST00000592159 KDM6BO15054 1643 aa15.98■□□□□ 0.15
KDM4B-209ENST00000592159 KDM4FA0A1W2PPD8 638 aa15.98■□□□□ 0.15
KDM4B-209ENST00000592159 TNIKQ9UKE5 1360 aa15.96■□□□□ 0.15
KDM4B-209ENST00000592159 FAM9AQ8IZU1 332 aaPredicted RBP15.95■□□□□ 0.14
KDM4B-209ENST00000592159 ABCC2Q92887 1545 aa15.89■□□□□ 0.13
KDM4B-209ENST00000592159 ASXL2Q76L83 1435 aa15.89■□□□□ 0.13
KDM4B-209ENST00000592159 PLB1Q6P1J6 1458 aa15.89■□□□□ 0.13
KDM4B-209ENST00000592159 UACAQ9BZF9 1416 aa15.86■□□□□ 0.13
KDM4B-209ENST00000592159 IQGAP2Q13576 1575 aa15.86■□□□□ 0.13
KDM4B-209ENST00000592159 UHRF1BP1LA0JNW5 1464 aa15.83■□□□□ 0.12
KDM4B-209ENST00000592159 GLI2P10070 1586 aa15.81■□□□□ 0.12
KDM4B-209ENST00000592159 PHF23Q9BUL5 403 aaPredicted RBP15.81■□□□□ 0.12
KDM4B-209ENST00000592159 RAPGEF2Q9Y4G8 1499 aa15.8■□□□□ 0.12
KDM4B-209ENST00000592159 DISP1Q96F81 1524 aa15.79■□□□□ 0.12
KDM4B-209ENST00000592159 LOC105371045A0A1W2PR82 267 aa15.78■□□□□ 0.12
KDM4B-209ENST00000592159 KCNH8Q96L42 1107 aa15.77■□□□□ 0.12
KDM4B-209ENST00000592159 EPRSP07814 1512 aaKnown RBP15.77■□□□□ 0.11
KDM4B-209ENST00000592159 EHMT2Q96KQ7 1210 aa15.76■□□□□ 0.11
KDM4B-209ENST00000592159 TEX14Q8IWB6 1497 aa15.76■□□□□ 0.11
KDM4B-209ENST00000592159 PPRC1Q5VV67 1664 aaKnown RBP15.76■□□□□ 0.11
KDM4B-209ENST00000592159 EEA1Q15075 1411 aa15.76■□□□□ 0.11
KDM4B-209ENST00000592159 KDM5BQ9UGL1 1544 aa15.75■□□□□ 0.11
KDM4B-209ENST00000592159 ILDR1Q86SU0 546 aaPredicted RBP15.75■□□□□ 0.11
KDM4B-209ENST00000592159 ADGRL1O94910 1474 aa15.75■□□□□ 0.11
KDM4B-209ENST00000592159 COL17A1Q9UMD9 1497 aaPredicted RBP15.74■□□□□ 0.11
KDM4B-209ENST00000592159 UGGT2Q9NYU1 1516 aa15.73■□□□□ 0.11
KDM4B-209ENST00000592159 ZCCHC11Q5TAX3 1644 aaKnown RBP15.72■□□□□ 0.11
KDM4B-209ENST00000592159 CSRNP3Q8WYN3 585 aa15.72■□□□□ 0.11
KDM4B-209ENST00000592159 KIAA0556O60303 1618 aa15.7■□□□□ 0.1
KDM4B-209ENST00000592159 MAP3K4Q9Y6R4 1608 aa15.7■□□□□ 0.1
KDM4B-209ENST00000592159 WDR7Q9Y4E6 1490 aa15.68■□□□□ 0.1
KDM4B-209ENST00000592159 CD109Q6YHK3 1445 aa15.67■□□□□ 0.1
KDM4B-209ENST00000592159 GOLGA3Q08378 1498 aa15.66■□□□□ 0.1
KDM4B-209ENST00000592159 ARID3CA6NKF2 412 aa15.64■□□□□ 0.09
KDM4B-209ENST00000592159 P3H3Q8IVL6 736 aa15.64■□□□□ 0.09
KDM4B-209ENST00000592159 CTTNBP2Q8WZ74 1663 aa15.6■□□□□ 0.09
KDM4B-209ENST00000592159 MAGI3Q5TCQ9 1506 aa15.59■□□□□ 0.09
KDM4B-209ENST00000592159 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.58■□□□□ 0.08
KDM4B-209ENST00000592159 HNRNPUL2Q1KMD3 747 aaKnown RBP15.58■□□□□ 0.08
KDM4B-209ENST00000592159 HECW2Q9P2P5 1572 aa15.58■□□□□ 0.08
KDM4B-209ENST00000592159 CFAP43Q8NDM7 1665 aa15.57■□□□□ 0.08
KDM4B-209ENST00000592159 ABCA8O94911 1581 aa15.57■□□□□ 0.08
KDM4B-209ENST00000592159 UBTFP17480 764 aaKnown RBP15.56■□□□□ 0.08
KDM4B-209ENST00000592159 KIF21BO75037 1637 aa15.55■□□□□ 0.08
KDM4B-209ENST00000592159 PRXQ9BXM0 1461 aa15.52■□□□□ 0.08
KDM4B-209ENST00000592159 RANGAP1P46060 587 aaPredicted RBP15.52■□□□□ 0.08
KDM4B-209ENST00000592159 ATP10BO94823 1461 aa15.51■□□□□ 0.07
KDM4B-209ENST00000592159 ARID4BQ4LE39 1312 aaPredicted RBP15.49■□□□□ 0.07
KDM4B-209ENST00000592159 RAPGEF3O95398 923 aa15.49■□□□□ 0.07
KDM4B-209ENST00000592159 PHLDB1Q86UU1 1377 aa15.49■□□□□ 0.07
KDM4B-209ENST00000592159 ARAP3Q8WWN8 1544 aa15.48■□□□□ 0.07
KDM4B-209ENST00000592159 PLEKHD1A6NEE1 506 aa15.43■□□□□ 0.06
KDM4B-209ENST00000592159 ABCA9Q8IUA7 1624 aa15.4■□□□□ 0.06
KDM4B-209ENST00000592159 FBXO41Q8TF61 875 aa15.4■□□□□ 0.06
KDM4B-209ENST00000592159 PTPRMP28827 1452 aa15.4■□□□□ 0.06
KDM4B-209ENST00000592159 NEO1Q92859 1461 aa15.4■□□□□ 0.06
KDM4B-209ENST00000592159 RAPGEF6Q8TEU7 1601 aa15.39■□□□□ 0.05
KDM4B-209ENST00000592159 PLPPR3Q6T4P5 718 aa15.39■□□□□ 0.05
KDM4B-209ENST00000592159 CEP162Q5TB80 1403 aa15.39■□□□□ 0.05
KDM4B-209ENST00000592159 SAMD9Q5K651 1589 aa15.36■□□□□ 0.05
KDM4B-209ENST00000592159 ADAMTSL3P82987 1691 aa15.35■□□□□ 0.05
KDM4B-209ENST00000592159 FHOD3Q2V2M9 1422 aa15.34■□□□□ 0.05
KDM4B-209ENST00000592159 ATP1B4Q9UN42 357 aaPredicted RBP15.33■□□□□ 0.04
KDM4B-209ENST00000592159 DENND4BO75064 1496 aaPredicted RBP15.33■□□□□ 0.04
KDM4B-209ENST00000592159 NUP153P49790 1475 aaKnown RBP15.33■□□□□ 0.04
KDM4B-209ENST00000592159 AKNAQ7Z591 1439 aa15.32■□□□□ 0.04
KDM4B-209ENST00000592159 CLIP1P30622 1438 aa15.31■□□□□ 0.04
KDM4B-209ENST00000592159 BCORL1Q5H9F3 1711 aa15.31■□□□□ 0.04
KDM4B-209ENST00000592159 MLECQ14165 292 aa15.3■□□□□ 0.04
KDM4B-209ENST00000592159 MADDQ8WXG6 1647 aa15.28■□□□□ 0.04
KDM4B-209ENST00000592159 FANCAO15360 1455 aa15.28■□□□□ 0.04
KDM4B-209ENST00000592159 POGZQ7Z3K3 1410 aa15.28■□□□□ 0.04
KDM4B-209ENST00000592159 HSPA2P54652 639 aa15.27■□□□□ 0.04
KDM4B-209ENST00000592159 FRMPD1Q5SYB0 1578 aa15.27■□□□□ 0.03
KDM4B-209ENST00000592159 PCF11O94913 1555 aaKnown RBP15.25■□□□□ 0.03
KDM4B-209ENST00000592159 RIMS1Q86UR5 1692 aaKnown RBP15.25■□□□□ 0.03
KDM4B-209ENST00000592159 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.23■□□□□ 0.037e-7■■□□□ 14.3
KDM4B-209ENST00000592159 MYT1LQ9UL68 1186 aa15.23■□□□□ 0.03
KDM4B-209ENST00000592159 CFAP74Q9C0B2 1584 aa15.23■□□□□ 0.03
KDM4B-209ENST00000592159 LMTK3Q96Q04 1460 aa15.22■□□□□ 0.03
KDM4B-209ENST00000592159 CDK11AQ9UQ88 783 aaPredicted RBP15.22■□□□□ 0.03
KDM4B-209ENST00000592159 RICTORQ6R327 1708 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms