RNA–Protein interactions for RNA: ENST00000592099.5

PTPRS-210, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

TSL 1 (best) BASIC

Gene PTPRS, Length 4,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-210ENST00000592099 HNRNPUQ00839 825 aaKnown RBP eCLIP16.43■□□□□ 0.22
PTPRS-210ENST00000592099 VPS8Q8N3P4 1428 aa16.43■□□□□ 0.22
PTPRS-210ENST00000592099 FKBP8Q14318 412 aa16.42■□□□□ 0.22
PTPRS-210ENST00000592099 ANP32AP39687 249 aaKnown RBP16.42■□□□□ 0.22
PTPRS-210ENST00000592099 SMARCA2P51531 1590 aa16.41■□□□□ 0.22
PTPRS-210ENST00000592099 KANK4Q5T7N3 995 aaPredicted RBP16.4■□□□□ 0.22
PTPRS-210ENST00000592099 BCL11AQ9H165 835 aa16.4■□□□□ 0.22
PTPRS-210ENST00000592099 FAM9BQ8IZU0 186 aa16.39■□□□□ 0.21
PTPRS-210ENST00000592099 CCNB3Q8WWL7 1395 aa16.38■□□□□ 0.21
PTPRS-210ENST00000592099 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.38■□□□□ 0.211e-6■□□□□ 9.8
PTPRS-210ENST00000592099 SIN3AQ96ST3 1273 aa16.38■□□□□ 0.21
PTPRS-210ENST00000592099 SMARCA4P51532 1647 aa16.35■□□□□ 0.21
PTPRS-210ENST00000592099 ATAD2BQ9ULI0 1458 aa16.35■□□□□ 0.21
PTPRS-210ENST00000592099 RUSC2Q8N2Y8 1516 aa16.35■□□□□ 0.21
PTPRS-210ENST00000592099 TMC1Q8TDI8 760 aa16.35■□□□□ 0.21
PTPRS-210ENST00000592099 KDM2AQ9Y2K7 1162 aa16.34■□□□□ 0.21
PTPRS-210ENST00000592099 EIF4G2P78344 907 aaKnown RBP eCLIP16.31■□□□□ 0.2
PTPRS-210ENST00000592099 FHAD1B1AJZ9 1412 aa16.31■□□□□ 0.2
PTPRS-210ENST00000592099 PLEKHD1A6NEE1 506 aa16.3■□□□□ 0.2
PTPRS-210ENST00000592099 MRS2Q9HD23 443 aa16.28■□□□□ 0.2
PTPRS-210ENST00000592099 CFDP1Q9UEE9 299 aaPredicted RBP16.27■□□□□ 0.2
PTPRS-210ENST00000592099 NPM2Q86SE8 214 aaKnown RBP16.27■□□□□ 0.2
PTPRS-210ENST00000592099 RAPGEF2Q9Y4G8 1499 aa16.27■□□□□ 0.19
PTPRS-210ENST00000592099 SALL2Q9Y467 1007 aaPredicted RBP16.26■□□□□ 0.19
PTPRS-210ENST00000592099 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.25■□□□□ 0.19
PTPRS-210ENST00000592099 KCNH8Q96L42 1107 aa16.24■□□□□ 0.19
PTPRS-210ENST00000592099 WDR43Q15061 677 aaKnown RBP eCLIP16.24■□□□□ 0.19
PTPRS-210ENST00000592099 UPF2Q9HAU5 1272 aaKnown RBP16.23■□□□□ 0.19
PTPRS-210ENST00000592099 TDRD9Q8NDG6 1382 aaKnown RBP16.23■□□□□ 0.19
PTPRS-210ENST00000592099 CADPSQ9ULU8 1353 aa16.22■□□□□ 0.19
PTPRS-210ENST00000592099 CCDC136Q96JN2 1154 aa16.21■□□□□ 0.19
PTPRS-210ENST00000592099 PLPPR3Q6T4P5 718 aa16.19■□□□□ 0.18
PTPRS-210ENST00000592099 IRX6P78412 446 aaPredicted RBP16.17■□□□□ 0.18
PTPRS-210ENST00000592099 HSP90AA1P07900 732 aaKnown RBP16.17■□□□□ 0.18
PTPRS-210ENST00000592099 RGL3Q3MIN7 710 aa16.17■□□□□ 0.18
PTPRS-210ENST00000592099 EIF4G1Q04637 1599 aaKnown RBP16.16■□□□□ 0.18
PTPRS-210ENST00000592099 SETD5Q9C0A6 1442 aa16.15■□□□□ 0.18
PTPRS-210ENST00000592099 ERCC6Q03468 1493 aa16.13■□□□□ 0.17
PTPRS-210ENST00000592099 RAB3GAP2Q9H2M9 1393 aa16.13■□□□□ 0.17
PTPRS-210ENST00000592099 PDS5BQ9NTI5 1447 aa16.1■□□□□ 0.17
PTPRS-210ENST00000592099 ARHGAP35Q9NRY4 1499 aa16.1■□□□□ 0.17
PTPRS-210ENST00000592099 TIMELESSQ9UNS1 1208 aa16.09■□□□□ 0.17
PTPRS-210ENST00000592099 SENP3-EIF4A1A0A087X0R7 540 aa16.09■□□□□ 0.17
PTPRS-210ENST00000592099 ANP32BQ92688 251 aaKnown RBP16.09■□□□□ 0.17
PTPRS-210ENST00000592099 FHOD3Q2V2M9 1422 aa16.07■□□□□ 0.16
PTPRS-210ENST00000592099 CDCA8Q53HL2 280 aa16.06■□□□□ 0.16
PTPRS-210ENST00000592099 FMN1Q68DA7 1419 aa16.05■□□□□ 0.16
PTPRS-210ENST00000592099 CARD11Q9BXL7 1154 aa16.05■□□□□ 0.16
PTPRS-210ENST00000592099 PPP1R15AO75807 674 aaPredicted RBP16.04■□□□□ 0.16
PTPRS-210ENST00000592099 FOXD1Q16676 465 aa16.03■□□□□ 0.16
PTPRS-210ENST00000592099 SUPT16HQ9Y5B9 1047 aaKnown RBP16.01■□□□□ 0.15
PTPRS-210ENST00000592099 MYH16Q9H6N6 1097 aa15.98■□□□□ 0.15
PTPRS-210ENST00000592099 IGF1RP08069 1367 aa15.98■□□□□ 0.15
PTPRS-210ENST00000592099 SENP3Q9H4L4 574 aaPredicted RBP15.98■□□□□ 0.15
PTPRS-210ENST00000592099 FANCD2Q9BXW9 1451 aa15.98■□□□□ 0.15
PTPRS-210ENST00000592099 CFAP53Q96M91 514 aa15.98■□□□□ 0.15
PTPRS-210ENST00000592099 DHX57Q6P158 1386 aaKnown RBP15.97■□□□□ 0.15
PTPRS-210ENST00000592099 KNSTRNQ9Y448 316 aa15.97■□□□□ 0.15
PTPRS-210ENST00000592099 HSPA5P11021 654 aaKnown RBP15.95■□□□□ 0.14
PTPRS-210ENST00000592099 MPHOSPH9Q99550 1183 aa15.94■□□□□ 0.14
PTPRS-210ENST00000592099 DCAF11Q8TEB1 546 aa15.94■□□□□ 0.14
PTPRS-210ENST00000592099 NCAPD3P42695 1498 aa15.94■□□□□ 0.14
PTPRS-210ENST00000592099 PKD2Q13563 968 aa15.92■□□□□ 0.14
PTPRS-210ENST00000592099 FGD5Q6ZNL6 1462 aa15.9■□□□□ 0.14
PTPRS-210ENST00000592099 CCER2I3L3R5 266 aa15.89■□□□□ 0.13
PTPRS-210ENST00000592099 C14orf37Q86TY3 774 aa15.88■□□□□ 0.13
PTPRS-210ENST00000592099 CARMIL2Q6F5E8 1435 aa15.88■□□□□ 0.13
PTPRS-210ENST00000592099 SYNJ1O43426 1573 aa15.86■□□□□ 0.13
PTPRS-210ENST00000592099 RAD54L2Q9Y4B4 1467 aa15.86■□□□□ 0.13
PTPRS-210ENST00000592099 KIF21BO75037 1637 aa15.86■□□□□ 0.13
PTPRS-210ENST00000592099 ARID4BQ4LE39 1312 aaPredicted RBP15.86■□□□□ 0.13
PTPRS-210ENST00000592099 L3MBTL2Q969R5 705 aa15.86■□□□□ 0.13
PTPRS-210ENST00000592099 NBR1Q14596 966 aa15.85■□□□□ 0.13
PTPRS-210ENST00000592099 JPH4Q96JJ6 628 aa15.83■□□□□ 0.12
PTPRS-210ENST00000592099 NUDCQ9Y266 331 aa15.83■□□□□ 0.12
PTPRS-210ENST00000592099 ZBTB7CA1YPR0 619 aa15.83■□□□□ 0.12
PTPRS-210ENST00000592099 BECN1Q14457 450 aa15.83■□□□□ 0.12
PTPRS-210ENST00000592099 DDRGK1Q96HY6 314 aa15.83■□□□□ 0.12
PTPRS-210ENST00000592099 NUP155O75694 1391 aa15.82■□□□□ 0.12
PTPRS-210ENST00000592099 CC2D1BQ5T0F9 858 aaKnown RBP15.81■□□□□ 0.12
PTPRS-210ENST00000592099 POGKQ9P215 609 aa15.81■□□□□ 0.12
PTPRS-210ENST00000592099 PPM1GO15355 546 aaPredicted RBP15.8■□□□□ 0.12
PTPRS-210ENST00000592099 MAPK8IP3Q9UPT6 1336 aa15.8■□□□□ 0.12
PTPRS-210ENST00000592099 CFTRP13569 1480 aa15.78■□□□□ 0.12
PTPRS-210ENST00000592099 ARAP1Q96P48 1450 aa15.78■□□□□ 0.12
PTPRS-210ENST00000592099 A0A0G2JS52 829 aa15.78■□□□□ 0.12
PTPRS-210ENST00000592099 EIF5BO60841 1220 aaKnown RBP15.78■□□□□ 0.12
PTPRS-210ENST00000592099 HNRNPMP52272 730 aaKnown RBP eCLIP15.78■□□□□ 0.12
PTPRS-210ENST00000592099 ANKRD30AQ9BXX3 1397 aa15.78■□□□□ 0.12
PTPRS-210ENST00000592099 PLEKHG5O94827 1062 aa15.78■□□□□ 0.12
PTPRS-210ENST00000592099 TMF1P82094 1093 aa15.77■□□□□ 0.12
PTPRS-210ENST00000592099 KANK1Q14678 1352 aa15.77■□□□□ 0.11
PTPRS-210ENST00000592099 PPP4R2Q9NY27 417 aa15.77■□□□□ 0.11
PTPRS-210ENST00000592099 FTSJ3Q8IY81 847 aaKnown RBP15.76■□□□□ 0.11
PTPRS-210ENST00000592099 PHLDB1Q86UU1 1377 aa15.76■□□□□ 0.11
PTPRS-210ENST00000592099 GAPVD1Q14C86 1478 aa15.76■□□□□ 0.11
PTPRS-210ENST00000592099 CCDC18Q5T9S5 1454 aa15.76■□□□□ 0.11
PTPRS-210ENST00000592099 NEUROD2Q15784 382 aa15.76■□□□□ 0.11
PTPRS-210ENST00000592099 B4GALNT3Q6L9W6 998 aa15.75■□□□□ 0.11
PTPRS-210ENST00000592099 ANP32EQ9BTT0 268 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms