RNA–Protein interactions for RNA: ENST00000590494.1

TMC6-215, Transcript of transmembrane channel like 6, humanhuman

TSL 2

Gene TMC6, Length 702 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-215ENST00000590494 FGD5Q6ZNL6 1462 aa20.89■□□□□ 0.94
TMC6-215ENST00000590494 GRIN2AQ12879 1464 aa20.82■□□□□ 0.92
TMC6-215ENST00000590494 NUP160Q12769 1436 aa20.81■□□□□ 0.92
TMC6-215ENST00000590494 DISP3Q9P2K9 1392 aa20.78■□□□□ 0.92
TMC6-215ENST00000590494 NPM1P06748 294 aaKnown RBP eCLIP20.78■□□□□ 0.92
TMC6-215ENST00000590494 ABCA5Q8WWZ7 1642 aa20.71■□□□□ 0.91
TMC6-215ENST00000590494 ADCY10Q96PN6 1610 aa20.71■□□□□ 0.91
TMC6-215ENST00000590494 PRG4Q92954 1404 aaPredicted RBP20.7■□□□□ 0.9
TMC6-215ENST00000590494 PPRC1Q5VV67 1664 aaKnown RBP20.67■□□□□ 0.9
TMC6-215ENST00000590494 CUX1P39880 1505 aa20.66■□□□□ 0.9
TMC6-215ENST00000590494 ADAMTS12P58397 1594 aa20.65■□□□□ 0.9
TMC6-215ENST00000590494 TOP2BQ02880 1626 aa20.64■□□□□ 0.9
TMC6-215ENST00000590494 COL17A1Q9UMD9 1497 aaPredicted RBP20.6■□□□□ 0.89
TMC6-215ENST00000590494 ABCA10Q8WWZ4 1543 aa20.58■□□□□ 0.88
TMC6-215ENST00000590494 JPH4Q96JJ6 628 aa20.53■□□□□ 0.88
TMC6-215ENST00000590494 SPATA31D1Q6ZQQ2 1576 aa20.52■□□□□ 0.88
TMC6-215ENST00000590494 GLI2P10070 1586 aa20.5■□□□□ 0.87
TMC6-215ENST00000590494 FHAD1B1AJZ9 1412 aa20.48■□□□□ 0.87
TMC6-215ENST00000590494 RUSC2Q8N2Y8 1516 aa20.4■□□□□ 0.86
TMC6-215ENST00000590494 CERKQ8TCT0 537 aa20.4■□□□□ 0.86
TMC6-215ENST00000590494 PCF11O94913 1555 aaKnown RBP20.36■□□□□ 0.85
TMC6-215ENST00000590494 ASXL2Q76L83 1435 aa20.36■□□□□ 0.85
TMC6-215ENST00000590494 MAP3K4Q9Y6R4 1608 aa20.35■□□□□ 0.85
TMC6-215ENST00000590494 PLB1Q6P1J6 1458 aa20.35■□□□□ 0.85
TMC6-215ENST00000590494 TEX14Q8IWB6 1497 aa20.35■□□□□ 0.85
TMC6-215ENST00000590494 PTPRMP28827 1452 aa20.31■□□□□ 0.84
TMC6-215ENST00000590494 KIF21BO75037 1637 aa20.31■□□□□ 0.84
TMC6-215ENST00000590494 ERICH3Q5RHP9 1530 aa20.29■□□□□ 0.84
TMC6-215ENST00000590494 ABCC2Q92887 1545 aa20.29■□□□□ 0.84
TMC6-215ENST00000590494 ADAMTSL3P82987 1691 aa20.24■□□□□ 0.83
TMC6-215ENST00000590494 EPRSP07814 1512 aaKnown RBP20.23■□□□□ 0.83
TMC6-215ENST00000590494 CUL7Q14999 1698 aa20.23■□□□□ 0.83
TMC6-215ENST00000590494 WRNQ14191 1432 aaPredicted RBP eCLIP20.19■□□□□ 0.82
TMC6-215ENST00000590494 KIAA0586Q9BVV6 1533 aa20.19■□□□□ 0.82
TMC6-215ENST00000590494 PTPRGP23470 1445 aa20.17■□□□□ 0.82
TMC6-215ENST00000590494 BIVM-ERCC5R4GMW8 1640 aa20.15■□□□□ 0.82
TMC6-215ENST00000590494 HSPA2P54652 639 aa20.11■□□□□ 0.81
TMC6-215ENST00000590494 UHRF1BP1LA0JNW5 1464 aa20.09■□□□□ 0.81
TMC6-215ENST00000590494 MADDQ8WXG6 1647 aa20.06■□□□□ 0.8
TMC6-215ENST00000590494 TTBK1Q5TCY1 1321 aaPredicted RBP20.05■□□□□ 0.8
TMC6-215ENST00000590494 BCORL1Q5H9F3 1711 aa20.03■□□□□ 0.8
TMC6-215ENST00000590494 TNIKQ9UKE5 1360 aa20.02■□□□□ 0.8
TMC6-215ENST00000590494 MAGI3Q5TCQ9 1506 aa20.02■□□□□ 0.79
TMC6-215ENST00000590494 KDM5BQ9UGL1 1544 aa20.02■□□□□ 0.79
TMC6-215ENST00000590494 ZCCHC11Q5TAX3 1644 aaKnown RBP19.99■□□□□ 0.79
TMC6-215ENST00000590494 UACAQ9BZF9 1416 aa19.98■□□□□ 0.79
TMC6-215ENST00000590494 CFAP43Q8NDM7 1665 aa19.96■□□□□ 0.79
TMC6-215ENST00000590494 RIMS1Q86UR5 1692 aaKnown RBP19.95■□□□□ 0.78
TMC6-215ENST00000590494 CD109Q6YHK3 1445 aa19.93■□□□□ 0.78
TMC6-215ENST00000590494 WDR7Q9Y4E6 1490 aa19.92■□□□□ 0.78
TMC6-215ENST00000590494 CARMIL2Q6F5E8 1435 aa19.92■□□□□ 0.78
TMC6-215ENST00000590494 ARAP3Q8WWN8 1544 aa19.91■□□□□ 0.78
TMC6-215ENST00000590494 ARID4BQ4LE39 1312 aaPredicted RBP19.81■□□□□ 0.76
TMC6-215ENST00000590494 STRCQ7RTU9 1775 aa19.8■□□□□ 0.76
TMC6-215ENST00000590494 YEATS2Q9ULM3 1422 aa19.78■□□□□ 0.76
TMC6-215ENST00000590494 IQSEC2Q5JU85 1478 aa19.78■□□□□ 0.76
TMC6-215ENST00000590494 DMRT2Q9Y5R5 561 aa19.77■□□□□ 0.76
TMC6-215ENST00000590494 PLPPR3Q6T4P5 718 aa19.76■□□□□ 0.75
TMC6-215ENST00000590494 KIF27Q86VH2 1401 aa19.76■□□□□ 0.75
TMC6-215ENST00000590494 DISP1Q96F81 1524 aa19.74■□□□□ 0.75
TMC6-215ENST00000590494 LTBP4Q8N2S1 1624 aa19.73■□□□□ 0.75
TMC6-215ENST00000590494 MED1Q15648 1581 aaPredicted RBP19.72■□□□□ 0.75
TMC6-215ENST00000590494 IQGAP2Q13576 1575 aa19.71■□□□□ 0.75
TMC6-215ENST00000590494 CHIC1Q5VXU3 224 aa19.71■□□□□ 0.75
TMC6-215ENST00000590494 KCNH8Q96L42 1107 aa19.71■□□□□ 0.75
TMC6-215ENST00000590494 PREX1Q8TCU6 1659 aa19.71■□□□□ 0.75
TMC6-215ENST00000590494 RAPGEF3O95398 923 aa19.69■□□□□ 0.74
TMC6-215ENST00000590494 FRMPD1Q5SYB0 1578 aa19.69■□□□□ 0.74
TMC6-215ENST00000590494 PHLDB1Q86UU1 1377 aa19.67■□□□□ 0.74
TMC6-215ENST00000590494 IGF1RP08069 1367 aa19.66■□□□□ 0.74
TMC6-215ENST00000590494 ARHGEF40Q8TER5 1519 aa19.66■□□□□ 0.74
TMC6-215ENST00000590494 TTC37Q6PGP7 1564 aa19.65■□□□□ 0.74
TMC6-215ENST00000590494 PTPRTO14522 1441 aa19.64■□□□□ 0.73
TMC6-215ENST00000590494 FER1L4A9Z1Z3 1794 aa19.61■□□□□ 0.73
TMC6-215ENST00000590494 POGZQ7Z3K3 1410 aa19.59■□□□□ 0.73
TMC6-215ENST00000590494 FANCAO15360 1455 aa19.58■□□□□ 0.72
TMC6-215ENST00000590494 SIGLEC1Q9BZZ2 1709 aa19.57■□□□□ 0.72
TMC6-215ENST00000590494 KIAA0556O60303 1618 aa19.57■□□□□ 0.72
TMC6-215ENST00000590494 NEO1Q92859 1461 aa19.55■□□□□ 0.72
TMC6-215ENST00000590494 UBAP1LF5GYI3 381 aa19.54■□□□□ 0.72
TMC6-215ENST00000590494 UGGT2Q9NYU1 1516 aa19.54■□□□□ 0.72
TMC6-215ENST00000590494 ABCA9Q8IUA7 1624 aa19.54■□□□□ 0.72
TMC6-215ENST00000590494 EEA1Q15075 1411 aa19.53■□□□□ 0.72
TMC6-215ENST00000590494 CARMIL1Q5VZK9 1371 aa19.52■□□□□ 0.72
TMC6-215ENST00000590494 UHRF1BP1Q6BDS2 1440 aa19.49■□□□□ 0.71
TMC6-215ENST00000590494 ABCA8O94911 1581 aa19.49■□□□□ 0.71
TMC6-215ENST00000590494 RICTORQ6R327 1708 aa19.48■□□□□ 0.71
TMC6-215ENST00000590494 PHF23Q9BUL5 403 aaPredicted RBP19.47■□□□□ 0.71
TMC6-215ENST00000590494 AKNAQ7Z591 1439 aa19.47■□□□□ 0.71
TMC6-215ENST00000590494 RAPGEF2Q9Y4G8 1499 aa19.45■□□□□ 0.7
TMC6-215ENST00000590494 HSPA1LP34931 641 aa19.44■□□□□ 0.7
TMC6-215ENST00000590494 MLECQ14165 292 aa19.44■□□□□ 0.7
TMC6-215ENST00000590494 ARHGEF12Q9NZN5 1544 aa19.43■□□□□ 0.7
TMC6-215ENST00000590494 CSRNP3Q8WYN3 585 aa19.43■□□□□ 0.7
TMC6-215ENST00000590494 SETD1BQ9UPS6 1966 aaKnown RBP19.43■□□□□ 0.7
TMC6-215ENST00000590494 PRXQ9BXM0 1461 aa19.41■□□□□ 0.7
TMC6-215ENST00000590494 CEBPAP49715 358 aaPredicted RBP19.41■□□□□ 0.7
TMC6-215ENST00000590494 FAM9AQ8IZU1 332 aaPredicted RBP19.4■□□□□ 0.7
TMC6-215ENST00000590494 ZFYVE16Q7Z3T8 1539 aa19.4■□□□□ 0.7
TMC6-215ENST00000590494 FHOD3Q2V2M9 1422 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms