RNA–Protein interactions for RNA: ENST00000589872.1

NBR1-205, Transcript of NBR1, autophagy cargo receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NBR1, Length 3,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-205ENST00000589872 IFT140Q96RY7 1462 aa17.79■□□□□ 0.44
NBR1-205ENST00000589872 KANK4Q5T7N3 995 aaPredicted RBP17.75■□□□□ 0.43
NBR1-205ENST00000589872 BIVM-ERCC5R4GMW8 1640 aa17.75■□□□□ 0.43
NBR1-205ENST00000589872 TARBP1Q13395 1621 aaKnown RBP17.75■□□□□ 0.43
NBR1-205ENST00000589872 RBM19Q9Y4C8 960 aaKnown RBP17.72■□□□□ 0.43
NBR1-205ENST00000589872 TOPBP1Q92547 1522 aa17.72■□□□□ 0.43
NBR1-205ENST00000589872 ARAP1Q96P48 1450 aa17.66■□□□□ 0.42
NBR1-205ENST00000589872 ITGAEP38570 1179 aa17.65■□□□□ 0.42
NBR1-205ENST00000589872 RRBP1Q9P2E9 1410 aaKnown RBP17.64■□□□□ 0.42
NBR1-205ENST00000589872 DDX10Q13206 875 aaKnown RBP17.64■□□□□ 0.41
NBR1-205ENST00000589872 MSH5O43196 834 aa17.6■□□□□ 0.41
NBR1-205ENST00000589872 TOP2BQ02880 1626 aa17.58■□□□□ 0.41
NBR1-205ENST00000589872 MAPKBP1O60336 1514 aa17.58■□□□□ 0.4
NBR1-205ENST00000589872 TRIM52Q96A61 297 aa17.58■□□□□ 0.4
NBR1-205ENST00000589872 NEFLP07196 543 aa17.57■□□□□ 0.4
NBR1-205ENST00000589872 CCNB3Q8WWL7 1395 aa17.57■□□□□ 0.4
NBR1-205ENST00000589872 ABCA5Q8WWZ7 1642 aa17.55■□□□□ 0.4
NBR1-205ENST00000589872 EIF4G3O43432 1585 aaKnown RBP17.54■□□□□ 0.4
NBR1-205ENST00000589872 RAB3GAP2Q9H2M9 1393 aa17.54■□□□□ 0.4
NBR1-205ENST00000589872 PPP1R15AO75807 674 aaPredicted RBP17.52■□□□□ 0.39
NBR1-205ENST00000589872 HIRIP3Q9BW71 556 aaPredicted RBP17.52■□□□□ 0.39
NBR1-205ENST00000589872 SIN3AQ96ST3 1273 aa17.51■□□□□ 0.39
NBR1-205ENST00000589872 CUX1P39880 1505 aa17.51■□□□□ 0.39
NBR1-205ENST00000589872 ABCA10Q8WWZ4 1543 aa17.51■□□□□ 0.39
NBR1-205ENST00000589872 PRXQ9BXM0 1461 aa17.5■□□□□ 0.39
NBR1-205ENST00000589872 ERICH3Q5RHP9 1530 aa17.49■□□□□ 0.39
NBR1-205ENST00000589872 PBRM1Q86U86 1689 aa17.49■□□□□ 0.39
NBR1-205ENST00000589872 POLA1P09884 1462 aaPredicted RBP17.48■□□□□ 0.39
NBR1-205ENST00000589872 MAGI1Q96QZ7 1491 aaPredicted RBP17.46■□□□□ 0.39
NBR1-205ENST00000589872 DNAJC5Q9H3Z4 198 aa17.46■□□□□ 0.38
NBR1-205ENST00000589872 CCER2I3L3R5 266 aa17.42■□□□□ 0.38
NBR1-205ENST00000589872 ANP32CO43423 234 aa17.4■□□□□ 0.38
NBR1-205ENST00000589872 ARHGAP35Q9NRY4 1499 aa17.4■□□□□ 0.38
NBR1-205ENST00000589872 SETD5Q9C0A6 1442 aa17.4■□□□□ 0.38
NBR1-205ENST00000589872 IRX6P78412 446 aaPredicted RBP17.39■□□□□ 0.37
NBR1-205ENST00000589872 FGD5Q6ZNL6 1462 aa17.37■□□□□ 0.37
NBR1-205ENST00000589872 FANCIQ9NVI1 1328 aa17.37■□□□□ 0.37
NBR1-205ENST00000589872 CLASP1Q7Z460 1538 aa17.37■□□□□ 0.37
NBR1-205ENST00000589872 CHD1O14646 1710 aa17.35■□□□□ 0.37
NBR1-205ENST00000589872 GRIN2BQ13224 1484 aa17.34■□□□□ 0.37
NBR1-205ENST00000589872 ERICH6Q7L0X2 663 aa17.32■□□□□ 0.36
NBR1-205ENST00000589872 CDK11AQ9UQ88 783 aaPredicted RBP17.31■□□□□ 0.36
NBR1-205ENST00000589872 CUL7Q14999 1698 aa17.3■□□□□ 0.36
NBR1-205ENST00000589872 ADAMTS12P58397 1594 aa17.3■□□□□ 0.36
NBR1-205ENST00000589872 SHROOM2Q13796 1616 aa17.29■□□□□ 0.36
NBR1-205ENST00000589872 FAM50AQ14320 339 aaKnown RBP17.29■□□□□ 0.36
NBR1-205ENST00000589872 PHLDB1Q86UU1 1377 aa17.29■□□□□ 0.36
NBR1-205ENST00000589872 TIAM1Q13009 1591 aa17.28■□□□□ 0.36
NBR1-205ENST00000589872 HNRNPUQ00839 825 aaKnown RBP eCLIP17.27■□□□□ 0.36
NBR1-205ENST00000589872 SYNJ2O15056 1496 aa17.26■□□□□ 0.35
NBR1-205ENST00000589872 KIF27Q86VH2 1401 aa17.25■□□□□ 0.35
NBR1-205ENST00000589872 TIMELESSQ9UNS1 1208 aa17.25■□□□□ 0.35
NBR1-205ENST00000589872 ZNF608Q9ULD9 1512 aaPredicted RBP17.25■□□□□ 0.35
NBR1-205ENST00000589872 LRRC9Q6ZRR7 1453 aa17.23■□□□□ 0.35
NBR1-205ENST00000589872 DEKP35659 375 aaKnown RBP17.19■□□□□ 0.34
NBR1-205ENST00000589872 MAP3K1Q13233 1512 aa17.18■□□□□ 0.34
NBR1-205ENST00000589872 GAPVD1Q14C86 1478 aa17.18■□□□□ 0.34
NBR1-205ENST00000589872 NUP160Q12769 1436 aa17.16■□□□□ 0.34
NBR1-205ENST00000589872 TONSLQ96HA7 1378 aa17.15■□□□□ 0.34
NBR1-205ENST00000589872 RIMBP3CA6NJZ7 1639 aa17.14■□□□□ 0.33
NBR1-205ENST00000589872 RIMBP3BA6NNM3 1639 aa17.14■□□□□ 0.33
NBR1-205ENST00000589872 RIMBP3Q9UFD9 1639 aa17.14■□□□□ 0.33
NBR1-205ENST00000589872 PPP4R2Q9NY27 417 aa17.14■□□□□ 0.33
NBR1-205ENST00000589872 FHAD1B1AJZ9 1412 aa17.13■□□□□ 0.33
NBR1-205ENST00000589872 SNAPC4Q5SXM2 1469 aa17.12■□□□□ 0.33
NBR1-205ENST00000589872 B4GALNT3Q6L9W6 998 aa17.12■□□□□ 0.33
NBR1-205ENST00000589872 RAD54L2Q9Y4B4 1467 aa17.11■□□□□ 0.33
NBR1-205ENST00000589872 CCDC184Q52MB2 194 aa17.11■□□□□ 0.33
NBR1-205ENST00000589872 ATP1B4Q9UN42 357 aaPredicted RBP17.11■□□□□ 0.33
NBR1-205ENST00000589872 PRKCSHP14314 528 aaPredicted RBP17.1■□□□□ 0.33
NBR1-205ENST00000589872 P3H3Q8IVL6 736 aa17.1■□□□□ 0.33
NBR1-205ENST00000589872 MYT1LQ9UL68 1186 aa17.09■□□□□ 0.33
NBR1-205ENST00000589872 CFAP43Q8NDM7 1665 aa17.08■□□□□ 0.32
NBR1-205ENST00000589872 IGF1RP08069 1367 aa17.07■□□□□ 0.32
NBR1-205ENST00000589872 NBR1Q14596 966 aa17.07■□□□□ 0.32
NBR1-205ENST00000589872 ERICH6BQ5W0A0 696 aa17.07■□□□□ 0.32
NBR1-205ENST00000589872 PCF11O94913 1555 aaKnown RBP17.07■□□□□ 0.32
NBR1-205ENST00000589872 PAK3O75914 559 aaPredicted RBP17.07■□□□□ 0.32
NBR1-205ENST00000589872 GRIN2AQ12879 1464 aa17.06■□□□□ 0.32
NBR1-205ENST00000589872 OSCARQ8IYS5 282 aa17.05■□□□□ 0.32
NBR1-205ENST00000589872 WASHC2AQ641Q2 1341 aa17.05■□□□□ 0.32
NBR1-205ENST00000589872 AQRO60306 1485 aaKnown RBP eCLIP17.04■□□□□ 0.324e-7■■■■□ 23.7
NBR1-205ENST00000589872 NOP58Q9Y2X3 529 aaKnown RBP17.03■□□□□ 0.32
NBR1-205ENST00000589872 CCDC18Q5T9S5 1454 aa17.02■□□□□ 0.32
NBR1-205ENST00000589872 ARHGEF11O15085 1522 aa17.02■□□□□ 0.32
NBR1-205ENST00000589872 KDM5BQ9UGL1 1544 aa17.02■□□□□ 0.32
NBR1-205ENST00000589872 HSPA5P11021 654 aaKnown RBP17.01■□□□□ 0.31
NBR1-205ENST00000589872 CARMIL1Q5VZK9 1371 aa17■□□□□ 0.31
NBR1-205ENST00000589872 CEP170Q5SW79 1584 aa17■□□□□ 0.31
NBR1-205ENST00000589872 FAM9BQ8IZU0 186 aa17■□□□□ 0.31
NBR1-205ENST00000589872 PTPRKQ15262 1439 aa16.99■□□□□ 0.31
NBR1-205ENST00000589872 UACAQ9BZF9 1416 aa16.98■□□□□ 0.31
NBR1-205ENST00000589872 FHOD3Q2V2M9 1422 aa16.97■□□□□ 0.31
NBR1-205ENST00000589872 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.96■□□□□ 0.31
NBR1-205ENST00000589872 PTPN23Q9H3S7 1636 aa16.94■□□□□ 0.3
NBR1-205ENST00000589872 FGD6Q6ZV73 1430 aa16.94■□□□□ 0.3
NBR1-205ENST00000589872 ANO8Q9HCE9 1232 aaPredicted RBP16.94■□□□□ 0.3
NBR1-205ENST00000589872 HFM1A2PYH4 1435 aa16.93■□□□□ 0.3
NBR1-205ENST00000589872 C11orf95C9JLR9 678 aaPredicted RBP16.93■□□□□ 0.3
NBR1-205ENST00000589872 CNTLNQ9NXG0 1405 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms