RNA–Protein interactions for RNA: ENST00000589872.1

NBR1-205, Transcript of NBR1, autophagy cargo receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NBR1, Length 3,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-205ENST00000589872 NISCHQ9Y2I1 1504 aa24.44■■□□□ 1.5
NBR1-205ENST00000589872 CCDC180Q9P1Z9 1646 aa22.36■■□□□ 1.17
NBR1-205ENST00000589872 MYO15BQ96JP2 1530 aa21.06■□□□□ 0.96
NBR1-205ENST00000589872 SHROOM4Q9ULL8 1493 aa21.01■□□□□ 0.95
NBR1-205ENST00000589872 HRCP23327 699 aa20.94■□□□□ 0.94
NBR1-205ENST00000589872 SUPT5HO00267 1087 aaKnown RBP20.87■□□□□ 0.93
NBR1-205ENST00000589872 DCAF1Q9Y4B6 1507 aa20.81■□□□□ 0.92
NBR1-205ENST00000589872 NACADO15069 1562 aa20.8■□□□□ 0.92
NBR1-205ENST00000589872 ABCC9O60706 1549 aa20.73■□□□□ 0.91
NBR1-205ENST00000589872 RB1CC1Q8TDY2 1594 aa20.69■□□□□ 0.9
NBR1-205ENST00000589872 PPARGC1BQ86YN6 1023 aaKnown RBP20.6■□□□□ 0.89
NBR1-205ENST00000589872 PCGF6Q9BYE7 350 aa20.59■□□□□ 0.89
NBR1-205ENST00000589872 CHIC1Q5VXU3 224 aa20.5■□□□□ 0.87
NBR1-205ENST00000589872 ZCCHC6Q5VYS8 1495 aaKnown RBP20.45■□□□□ 0.86
NBR1-205ENST00000589872 UNC13AQ9UPW8 1703 aa20.23■□□□□ 0.83
NBR1-205ENST00000589872 LOC105371045A0A1W2PR82 267 aa20.05■□□□□ 0.8
NBR1-205ENST00000589872 BICRAQ9NZM4 1560 aa19.99■□□□□ 0.79
NBR1-205ENST00000589872 TRIM26Q12899 539 aaPredicted RBP19.91■□□□□ 0.78
NBR1-205ENST00000589872 PELP1Q8IZL8 1130 aaKnown RBP19.9■□□□□ 0.78
NBR1-205ENST00000589872 DCAF8L2P0C7V8 631 aa19.8■□□□□ 0.76
NBR1-205ENST00000589872 SCAF1Q9H7N4 1312 aaKnown RBP19.79■□□□□ 0.76
NBR1-205ENST00000589872 ZEB1P37275 1124 aaPredicted RBP19.65■□□□□ 0.74
NBR1-205ENST00000589872 SCRIBQ14160 1630 aa19.47■□□□□ 0.71
NBR1-205ENST00000589872 EIF4G1Q04637 1599 aaKnown RBP19.36■□□□□ 0.69
NBR1-205ENST00000589872 FAM9AQ8IZU1 332 aaPredicted RBP19.31■□□□□ 0.68
NBR1-205ENST00000589872 ACIN1Q9UKV3 1341 aaKnown RBP19.3■□□□□ 0.68
NBR1-205ENST00000589872 NEUROD1Q13562 356 aa19.29■□□□□ 0.68
NBR1-205ENST00000589872 TRIM41Q8WV44 630 aa19.27■□□□□ 0.68
NBR1-205ENST00000589872 EHMT2Q96KQ7 1210 aa19.26■□□□□ 0.67
NBR1-205ENST00000589872 PEG3Q9GZU2 1588 aa19.25■□□□□ 0.67
NBR1-205ENST00000589872 CC2D2AQ9P2K1 1620 aa19.22■□□□□ 0.67
NBR1-205ENST00000589872 GTF3C3Q9Y5Q9 886 aa19.15■□□□□ 0.66
NBR1-205ENST00000589872 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.14■□□□□ 0.65
NBR1-205ENST00000589872 HMGXB3Q12766 1538 aa19.11■□□□□ 0.65
NBR1-205ENST00000589872 SMARCA2P51531 1590 aa19.1■□□□□ 0.65
NBR1-205ENST00000589872 RSF1Q96T23 1441 aaPredicted RBP19.1■□□□□ 0.65
NBR1-205ENST00000589872 CCER1Q8TC90 406 aaPredicted RBP19.05■□□□□ 0.64
NBR1-205ENST00000589872 MYT1Q01538 1121 aa19.04■□□□□ 0.64
NBR1-205ENST00000589872 BAZ1AQ9NRL2 1556 aaPredicted RBP19.04■□□□□ 0.64
NBR1-205ENST00000589872 SMARCA4P51532 1647 aa19.04■□□□□ 0.64
NBR1-205ENST00000589872 DIEXFQ68CQ4 756 aaKnown RBP19.02■□□□□ 0.64
NBR1-205ENST00000589872 NCAPD3P42695 1498 aa19.02■□□□□ 0.63
NBR1-205ENST00000589872 CENPBP07199 599 aaPredicted RBP18.99■□□□□ 0.63
NBR1-205ENST00000589872 PABPN1Q86U42 306 aaKnown RBP eCLIP18.96■□□□□ 0.63
NBR1-205ENST00000589872 CECR2Q9BXF3 1484 aa18.92■□□□□ 0.62
NBR1-205ENST00000589872 DNAJC5BQ9UF47 199 aa18.9■□□□□ 0.62
NBR1-205ENST00000589872 ATAD2BQ9ULI0 1458 aa18.8■□□□□ 0.6
NBR1-205ENST00000589872 TTBK1Q5TCY1 1321 aaPredicted RBP18.78■□□□□ 0.6
NBR1-205ENST00000589872 YTHDC1Q96MU7 727 aaKnown RBP18.74■□□□□ 0.59
NBR1-205ENST00000589872 ZNF316A6NFI3 1004 aaPredicted RBP18.68■□□□□ 0.58
NBR1-205ENST00000589872 LAMC3Q9Y6N6 1575 aa18.64■□□□□ 0.57
NBR1-205ENST00000589872 PRDM2Q13029 1718 aa18.61■□□□□ 0.57
NBR1-205ENST00000589872 MROH2BQ7Z745 1585 aa18.6■□□□□ 0.57
NBR1-205ENST00000589872 MIER1Q8N108 512 aa18.58■□□□□ 0.57
NBR1-205ENST00000589872 WRNQ14191 1432 aaPredicted RBP eCLIP18.56■□□□□ 0.56
NBR1-205ENST00000589872 WIZO95785 1651 aa18.55■□□□□ 0.56
NBR1-205ENST00000589872 BAZ1BQ9UIG0 1483 aaKnown RBP18.54■□□□□ 0.56
NBR1-205ENST00000589872 TOP2AP11388 1531 aaKnown RBP18.52■□□□□ 0.56
NBR1-205ENST00000589872 CUX2O14529 1486 aa18.5■□□□□ 0.55
NBR1-205ENST00000589872 CEP162Q5TB80 1403 aa18.5■□□□□ 0.55
NBR1-205ENST00000589872 CCDC88BA6NC98 1476 aa18.42■□□□□ 0.54
NBR1-205ENST00000589872 ABCC8Q09428 1581 aa18.41■□□□□ 0.54
NBR1-205ENST00000589872 THOC2Q8NI27 1593 aaKnown RBP18.37■□□□□ 0.53
NBR1-205ENST00000589872 TNIKQ9UKE5 1360 aa18.36■□□□□ 0.53
NBR1-205ENST00000589872 SOGA1O94964 1423 aa18.35■□□□□ 0.53
NBR1-205ENST00000589872 HNRNPUL2Q1KMD3 747 aaKnown RBP18.34■□□□□ 0.53
NBR1-205ENST00000589872 UBTFP17480 764 aaKnown RBP18.29■□□□□ 0.52
NBR1-205ENST00000589872 RUSC2Q8N2Y8 1516 aa18.28■□□□□ 0.52
NBR1-205ENST00000589872 SUPT16HQ9Y5B9 1047 aaKnown RBP18.25■□□□□ 0.51
NBR1-205ENST00000589872 WDR62O43379 1518 aa18.24■□□□□ 0.51
NBR1-205ENST00000589872 CFTRP13569 1480 aa18.24■□□□□ 0.51
NBR1-205ENST00000589872 CSRNP3Q8WYN3 585 aa18.24■□□□□ 0.51
NBR1-205ENST00000589872 PDS5BQ9NTI5 1447 aa18.2■□□□□ 0.5
NBR1-205ENST00000589872 WDR97A6NE52 1622 aa18.2■□□□□ 0.5
NBR1-205ENST00000589872 KIF21AQ7Z4S6 1674 aa18.19■□□□□ 0.5
NBR1-205ENST00000589872 CADPSQ9ULU8 1353 aa18.18■□□□□ 0.5
NBR1-205ENST00000589872 TSHZ2Q9NRE2 1034 aa18.16■□□□□ 0.5
NBR1-205ENST00000589872 GOLGA3Q08378 1498 aa18.14■□□□□ 0.49
NBR1-205ENST00000589872 EEA1Q15075 1411 aa18.12■□□□□ 0.49
NBR1-205ENST00000589872 MRC2Q9UBG0 1479 aa18.1■□□□□ 0.49
NBR1-205ENST00000589872 ANP32EQ9BTT0 268 aa18.1■□□□□ 0.49
NBR1-205ENST00000589872 CLSPNQ9HAW4 1339 aa18.09■□□□□ 0.49
NBR1-205ENST00000589872 CLIP1P30622 1438 aa18.01■□□□□ 0.47
NBR1-205ENST00000589872 BCL11AQ9H165 835 aa18■□□□□ 0.47
NBR1-205ENST00000589872 ERCC6Q03468 1493 aa17.99■□□□□ 0.47
NBR1-205ENST00000589872 CEP164Q9UPV0 1460 aa17.98■□□□□ 0.47
NBR1-205ENST00000589872 VPS8Q8N3P4 1428 aa17.98■□□□□ 0.47
NBR1-205ENST00000589872 DHX57Q6P158 1386 aaKnown RBP17.97■□□□□ 0.47
NBR1-205ENST00000589872 NESP48681 1621 aa17.95■□□□□ 0.46
NBR1-205ENST00000589872 APLP2Q06481 763 aa17.95■□□□□ 0.46
NBR1-205ENST00000589872 RANGAP1P46060 587 aaPredicted RBP17.94■□□□□ 0.46
NBR1-205ENST00000589872 KCNH8Q96L42 1107 aa17.93■□□□□ 0.46
NBR1-205ENST00000589872 FANCD2Q9BXW9 1451 aa17.92■□□□□ 0.46
NBR1-205ENST00000589872 KIF21BO75037 1637 aa17.91■□□□□ 0.46
NBR1-205ENST00000589872 BCANQ96GW7 911 aa17.91■□□□□ 0.46
NBR1-205ENST00000589872 DNMBPQ6XZF7 1577 aa17.91■□□□□ 0.46
NBR1-205ENST00000589872 SYNJ1O43426 1573 aa17.84■□□□□ 0.45
NBR1-205ENST00000589872 RAPGEF2Q9Y4G8 1499 aa17.84■□□□□ 0.45
NBR1-205ENST00000589872 FKBP8Q14318 412 aa17.79■□□□□ 0.44
NBR1-205ENST00000589872 URB2Q14146 1524 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms