RNA–Protein interactions for RNA: ENST00000588190.1

SMAD7-206, Transcript of SMAD family member 7, humanhuman

TSL 5

Gene SMAD7, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD7-206ENST00000588190 TTBK1Q5TCY1 1321 aaPredicted RBP24.57■■□□□ 1.52
SMAD7-206ENST00000588190 FAM69CQ0P6D2 419 aa24.55■■□□□ 1.52
SMAD7-206ENST00000588190 RUSC2Q8N2Y8 1516 aa24.54■■□□□ 1.52
SMAD7-206ENST00000588190 KIF27Q86VH2 1401 aa24.52■■□□□ 1.52
SMAD7-206ENST00000588190 KIF13AQ9H1H9 1805 aa24.5■■□□□ 1.51
SMAD7-206ENST00000588190 IGF1RP08069 1367 aa24.49■■□□□ 1.51
SMAD7-206ENST00000588190 KIAA0586Q9BVV6 1533 aa24.44■■□□□ 1.5
SMAD7-206ENST00000588190 CUL7Q14999 1698 aa24.41■■□□□ 1.5
SMAD7-206ENST00000588190 ABCC10Q5T3U5 1492 aa24.39■■□□□ 1.5
SMAD7-206ENST00000588190 ADCY10Q96PN6 1610 aa24.39■■□□□ 1.49
SMAD7-206ENST00000588190 CARMIL1Q5VZK9 1371 aa24.38■■□□□ 1.49
SMAD7-206ENST00000588190 PTPRGP23470 1445 aa24.35■■□□□ 1.49
SMAD7-206ENST00000588190 MAPKBP1O60336 1514 aa24.34■■□□□ 1.49
SMAD7-206ENST00000588190 TSPOAP1O95153 1857 aa24.32■■□□□ 1.48
SMAD7-206ENST00000588190 DIP2BQ9P265 1576 aa24.3■■□□□ 1.48
SMAD7-206ENST00000588190 CARMIL2Q6F5E8 1435 aa24.29■■□□□ 1.48
SMAD7-206ENST00000588190 TNIKQ9UKE5 1360 aa24.25■■□□□ 1.47
SMAD7-206ENST00000588190 KDM6BO15054 1643 aa24.22■■□□□ 1.47
SMAD7-206ENST00000588190 IQGAP2Q13576 1575 aa24.2■■□□□ 1.46
SMAD7-206ENST00000588190 ABCC2Q92887 1545 aa24.15■■□□□ 1.46
SMAD7-206ENST00000588190 ASXL2Q76L83 1435 aa24.13■■□□□ 1.45
SMAD7-206ENST00000588190 UACAQ9BZF9 1416 aa24.1■■□□□ 1.45
SMAD7-206ENST00000588190 RAPGEF2Q9Y4G8 1499 aa24.1■■□□□ 1.45
SMAD7-206ENST00000588190 PLB1Q6P1J6 1458 aa24.09■■□□□ 1.45
SMAD7-206ENST00000588190 KDM4FA0A1W2PPD8 638 aa24.06■■□□□ 1.44
SMAD7-206ENST00000588190 DISP1Q96F81 1524 aa24.05■■□□□ 1.44
SMAD7-206ENST00000588190 UHRF1BP1LA0JNW5 1464 aa24.03■■□□□ 1.44
SMAD7-206ENST00000588190 UGGT2Q9NYU1 1516 aa23.99■■□□□ 1.43
SMAD7-206ENST00000588190 GLI2P10070 1586 aa23.96■■□□□ 1.43
SMAD7-206ENST00000588190 KIAA0556O60303 1618 aa23.95■■□□□ 1.43
SMAD7-206ENST00000588190 ZCCHC11Q5TAX3 1644 aaKnown RBP23.94■■□□□ 1.42
SMAD7-206ENST00000588190 EPRSP07814 1512 aaKnown RBP23.94■■□□□ 1.42
SMAD7-206ENST00000588190 KCNH8Q96L42 1107 aa23.93■■□□□ 1.42
SMAD7-206ENST00000588190 KDM5BQ9UGL1 1544 aa23.93■■□□□ 1.42
SMAD7-206ENST00000588190 PPRC1Q5VV67 1664 aaKnown RBP23.92■■□□□ 1.42
SMAD7-206ENST00000588190 FAM9AQ8IZU1 332 aaPredicted RBP23.9■■□□□ 1.42
SMAD7-206ENST00000588190 TEX14Q8IWB6 1497 aa23.88■■□□□ 1.41
SMAD7-206ENST00000588190 CTTNBP2Q8WZ74 1663 aa23.88■■□□□ 1.41
SMAD7-206ENST00000588190 ARID3CA6NKF2 412 aa23.87■■□□□ 1.41
SMAD7-206ENST00000588190 GOLGA3Q08378 1498 aa23.86■■□□□ 1.41
SMAD7-206ENST00000588190 MAP3K4Q9Y6R4 1608 aa23.85■■□□□ 1.41
SMAD7-206ENST00000588190 P3H3Q8IVL6 736 aa23.85■■□□□ 1.41
SMAD7-206ENST00000588190 WDR7Q9Y4E6 1490 aa23.84■■□□□ 1.41
SMAD7-206ENST00000588190 COL17A1Q9UMD9 1497 aaPredicted RBP23.83■■□□□ 1.41
SMAD7-206ENST00000588190 ADGRL1O94910 1474 aa23.82■■□□□ 1.4
SMAD7-206ENST00000588190 CD109Q6YHK3 1445 aa23.77■■□□□ 1.4
SMAD7-206ENST00000588190 RANGAP1P46060 587 aaPredicted RBP23.76■■□□□ 1.39
SMAD7-206ENST00000588190 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.73■■□□□ 1.39
SMAD7-206ENST00000588190 HNRNPUL2Q1KMD3 747 aaKnown RBP23.73■■□□□ 1.39
SMAD7-206ENST00000588190 PRXQ9BXM0 1461 aa23.73■■□□□ 1.39
SMAD7-206ENST00000588190 ABCA8O94911 1581 aa23.73■■□□□ 1.39
SMAD7-206ENST00000588190 CFAP43Q8NDM7 1665 aa23.67■■□□□ 1.38
SMAD7-206ENST00000588190 CSRNP3Q8WYN3 585 aa23.67■■□□□ 1.38
SMAD7-206ENST00000588190 MAGI3Q5TCQ9 1506 aa23.64■■□□□ 1.38
SMAD7-206ENST00000588190 ATP10BO94823 1461 aa23.59■■□□□ 1.37
SMAD7-206ENST00000588190 ILDR1Q86SU0 546 aaPredicted RBP23.58■■□□□ 1.37
SMAD7-206ENST00000588190 HECW2Q9P2P5 1572 aa23.53■■□□□ 1.36
SMAD7-206ENST00000588190 KIF21BO75037 1637 aa23.51■■□□□ 1.35
SMAD7-206ENST00000588190 EHMT2Q96KQ7 1210 aa23.51■■□□□ 1.35
SMAD7-206ENST00000588190 RAPGEF3O95398 923 aa23.5■■□□□ 1.35
SMAD7-206ENST00000588190 RAPGEF6Q8TEU7 1601 aa23.5■■□□□ 1.35
SMAD7-206ENST00000588190 ARID4BQ4LE39 1312 aaPredicted RBP23.48■■□□□ 1.35
SMAD7-206ENST00000588190 ARAP3Q8WWN8 1544 aa23.47■■□□□ 1.35
SMAD7-206ENST00000588190 SAMD9Q5K651 1589 aa23.47■■□□□ 1.35
SMAD7-206ENST00000588190 FHOD3Q2V2M9 1422 aa23.46■■□□□ 1.35
SMAD7-206ENST00000588190 PLEKHD1A6NEE1 506 aa23.45■■□□□ 1.34
SMAD7-206ENST00000588190 ABCA9Q8IUA7 1624 aa23.44■■□□□ 1.34
SMAD7-206ENST00000588190 PHLDB1Q86UU1 1377 aa23.42■■□□□ 1.34
SMAD7-206ENST00000588190 EEA1Q15075 1411 aa23.42■■□□□ 1.34
SMAD7-206ENST00000588190 ATP1B4Q9UN42 357 aaPredicted RBP23.41■■□□□ 1.34
SMAD7-206ENST00000588190 NUP153P49790 1475 aaKnown RBP23.39■■□□□ 1.34
SMAD7-206ENST00000588190 NEO1Q92859 1461 aa23.36■■□□□ 1.33
SMAD7-206ENST00000588190 PLPPR3Q6T4P5 718 aa23.36■■□□□ 1.33
SMAD7-206ENST00000588190 UBTFP17480 764 aaKnown RBP23.35■■□□□ 1.33
SMAD7-206ENST00000588190 PTPRMP28827 1452 aa23.29■■□□□ 1.32
SMAD7-206ENST00000588190 DENND4BO75064 1496 aaPredicted RBP23.27■■□□□ 1.32
SMAD7-206ENST00000588190 AKNAQ7Z591 1439 aa23.26■■□□□ 1.31
SMAD7-206ENST00000588190 FANCAO15360 1455 aa23.26■■□□□ 1.31
SMAD7-206ENST00000588190 ADAMTSL3P82987 1691 aa23.25■■□□□ 1.31
SMAD7-206ENST00000588190 EFCAB5A4FU69 1503 aa23.24■■□□□ 1.31
SMAD7-206ENST00000588190 FRMPD1Q5SYB0 1578 aa23.24■■□□□ 1.31
SMAD7-206ENST00000588190 MLECQ14165 292 aa23.22■■□□□ 1.31
SMAD7-206ENST00000588190 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.22■■□□□ 1.31
SMAD7-206ENST00000588190 CDK13Q14004 1512 aaKnown RBP23.21■■□□□ 1.31
SMAD7-206ENST00000588190 MADDQ8WXG6 1647 aa23.21■■□□□ 1.31
SMAD7-206ENST00000588190 BCORL1Q5H9F3 1711 aa23.21■■□□□ 1.31
SMAD7-206ENST00000588190 CFAP74Q9C0B2 1584 aa23.2■■□□□ 1.3
SMAD7-206ENST00000588190 TTC37Q6PGP7 1564 aa23.18■■□□□ 1.3
SMAD7-206ENST00000588190 RICTORQ6R327 1708 aa23.16■■□□□ 1.3
SMAD7-206ENST00000588190 MYT1LQ9UL68 1186 aa23.16■■□□□ 1.3
SMAD7-206ENST00000588190 ARHGEF40Q8TER5 1519 aa23.16■■□□□ 1.3
SMAD7-206ENST00000588190 POGZQ7Z3K3 1410 aa23.16■■□□□ 1.3
SMAD7-206ENST00000588190 RIMS1Q86UR5 1692 aaKnown RBP23.16■■□□□ 1.3
SMAD7-206ENST00000588190 CDK11AQ9UQ88 783 aaPredicted RBP23.15■■□□□ 1.3
SMAD7-206ENST00000588190 SCAPERQ9BY12 1400 aa23.12■■□□□ 1.29
SMAD7-206ENST00000588190 ZFYVE16Q7Z3T8 1539 aa23.12■■□□□ 1.29
SMAD7-206ENST00000588190 FMN1Q68DA7 1419 aa23.11■■□□□ 1.29
SMAD7-206ENST00000588190 YEATS2Q9ULM3 1422 aa23.11■■□□□ 1.29
SMAD7-206ENST00000588190 EFCAB2Q5VUJ9 269 aa23.11■■□□□ 1.29
SMAD7-206ENST00000588190 HSPA2P54652 639 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms