RNA–Protein interactions for RNA: ENST00000588041.1

AC002546.1-201, humanhuman

BASIC

Gene AC002546.1, Length 2,504 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC002546.1-201ENST00000588041 CHGAP10645 457 aaKnown RBP5.63□□□□□ -1.51
AC002546.1-201ENST00000588041 CHRDL2Q6WN34 429 aa5.63□□□□□ -1.51
AC002546.1-201ENST00000588041 SPINK5Q9NQ38 1064 aaPredicted RBP5.62□□□□□ -1.51
AC002546.1-201ENST00000588041 ARID3CA6NKF2 412 aa5.6□□□□□ -1.51
AC002546.1-201ENST00000588041 CCDC9Q9Y3X0 531 aaKnown RBP5.59□□□□□ -1.51
AC002546.1-201ENST00000588041 RBM42Q9BTD8 480 aaKnown RBP5.59□□□□□ -1.51
AC002546.1-201ENST00000588041 NEUROD2Q15784 382 aa5.58□□□□□ -1.52
AC002546.1-201ENST00000588041 SPDYE4A6NLX3 237 aa5.57□□□□□ -1.52
AC002546.1-201ENST00000588041 ZNF428Q96B54 188 aa5.57□□□□□ -1.52
AC002546.1-201ENST00000588041 ZMYND15Q9H091 742 aa5.55□□□□□ -1.52
AC002546.1-201ENST00000588041 U3KPZ7 1027 aaPredicted RBP5.55□□□□□ -1.52
AC002546.1-201ENST00000588041 LMOD2Q6P5Q4 547 aa5.53□□□□□ -1.52
AC002546.1-201ENST00000588041 CHMP4AQ9BY43 222 aa5.53□□□□□ -1.52
AC002546.1-201ENST00000588041 ZBTB7CA1YPR0 619 aa5.53□□□□□ -1.52
AC002546.1-201ENST00000588041 RSPH6AQ9H0K4 717 aa5.52□□□□□ -1.53
AC002546.1-201ENST00000588041 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.52□□□□□ -1.53
AC002546.1-201ENST00000588041 PDIA4P13667 645 aaKnown RBP5.51□□□□□ -1.53
AC002546.1-201ENST00000588041 PROM2Q8N271 834 aa5.51□□□□□ -1.53
AC002546.1-201ENST00000588041 SLC24A3Q9HC58 644 aa5.5□□□□□ -1.53
AC002546.1-201ENST00000588041 SHROOM4Q9ULL8 1493 aa5.5□□□□□ -1.53
AC002546.1-201ENST00000588041 APBB1O00213 710 aa5.49□□□□□ -1.53
AC002546.1-201ENST00000588041 LHX8Q68G74 356 aa5.49□□□□□ -1.53
AC002546.1-201ENST00000588041 NKX1-1Q15270 411 aaPredicted RBP5.49□□□□□ -1.53
AC002546.1-201ENST00000588041 SAMD1Q6SPF0 538 aaPredicted RBP5.49□□□□□ -1.53
AC002546.1-201ENST00000588041 ABCB7O75027 752 aa5.48□□□□□ -1.53
AC002546.1-201ENST00000588041 CDK11BP21127 795 aaKnown RBP5.48□□□□□ -1.53
AC002546.1-201ENST00000588041 CDK11AQ9UQ88 783 aaPredicted RBP5.48□□□□□ -1.53
AC002546.1-201ENST00000588041 KCTD17Q8N5Z5 321 aa5.47□□□□□ -1.53
AC002546.1-201ENST00000588041 RAD21O60216 631 aa5.47□□□□□ -1.53
AC002546.1-201ENST00000588041 SPOCK2Q92563 424 aa5.46□□□□□ -1.53
AC002546.1-201ENST00000588041 HAX1O00165 279 aa5.46□□□□□ -1.54
AC002546.1-201ENST00000588041 FOXD4L5Q5VV16 416 aaPredicted RBP5.46□□□□□ -1.54
AC002546.1-201ENST00000588041 FOXD4L4Q8WXT5 416 aaPredicted RBP5.46□□□□□ -1.54
AC002546.1-201ENST00000588041 DHX37Q8IY37 1157 aaKnown RBP5.45□□□□□ -1.54
AC002546.1-201ENST00000588041 MTMR7Q9Y216 660 aa5.45□□□□□ -1.54
AC002546.1-201ENST00000588041 MKRN4PQ13434 485 aaPredicted RBP5.44□□□□□ -1.54
AC002546.1-201ENST00000588041 GPBP1L1Q9HC44 474 aaPredicted RBP5.44□□□□□ -1.54
AC002546.1-201ENST00000588041 ZNF219Q9P2Y4 722 aaPredicted RBP5.44□□□□□ -1.54
AC002546.1-201ENST00000588041 TRIM41Q8WV44 630 aa5.44□□□□□ -1.54
AC002546.1-201ENST00000588041 IL27Q8NEV9 243 aa5.43□□□□□ -1.54
AC002546.1-201ENST00000588041 ZC3H15Q8WU90 426 aaKnown RBP5.43□□□□□ -1.54
AC002546.1-201ENST00000588041 GTPBP6O43824 516 aaPredicted RBP5.42□□□□□ -1.54
AC002546.1-201ENST00000588041 RBM25P49756 843 aaKnown RBP5.42□□□□□ -1.54
AC002546.1-201ENST00000588041 KCNV2Q8TDN2 545 aa5.42□□□□□ -1.54
AC002546.1-201ENST00000588041 MKRN3Q13064 507 aaKnown RBP5.41□□□□□ -1.54
AC002546.1-201ENST00000588041 RGS22Q8NE09 1264 aa5.41□□□□□ -1.54
AC002546.1-201ENST00000588041 AEBP1Q8IUX7 1158 aa5.41□□□□□ -1.54
AC002546.1-201ENST00000588041 CCDC82Q8N4S0 544 aa5.4□□□□□ -1.54
AC002546.1-201ENST00000588041 RNF25Q96BH1 459 aaPredicted RBP5.39□□□□□ -1.55
AC002546.1-201ENST00000588041 HSP90B1P14625 803 aaKnown RBP5.39□□□□□ -1.55
AC002546.1-201ENST00000588041 HS6ST3Q8IZP7 471 aa5.39□□□□□ -1.55
AC002546.1-201ENST00000588041 BCL11AQ9H165 835 aa5.39□□□□□ -1.55
AC002546.1-201ENST00000588041 CIZ1Q9ULV3 898 aaPredicted RBP5.38□□□□□ -1.55
AC002546.1-201ENST00000588041 FAM9AQ8IZU1 332 aaPredicted RBP5.37□□□□□ -1.55
AC002546.1-201ENST00000588041 PCDH10Q9P2E7 1040 aa5.37□□□□□ -1.55
AC002546.1-201ENST00000588041 PUS7Q96PZ0 661 aaKnown RBP5.34□□□□□ -1.56
AC002546.1-201ENST00000588041 PIP4P2Q8N4L2 257 aa5.33□□□□□ -1.56
AC002546.1-201ENST00000588041 MFAP1P55081 439 aaKnown RBP5.32□□□□□ -1.56
AC002546.1-201ENST00000588041 USP35Q9P2H5 1018 aa5.32□□□□□ -1.56
AC002546.1-201ENST00000588041 CLUAP1Q96AJ1 413 aa5.32□□□□□ -1.56
AC002546.1-201ENST00000588041 WDR70Q9NW82 654 aa5.32□□□□□ -1.56
AC002546.1-201ENST00000588041 SEMA3EO15041 775 aa5.31□□□□□ -1.56
AC002546.1-201ENST00000588041 P3H3Q8IVL6 736 aa5.31□□□□□ -1.56
AC002546.1-201ENST00000588041 POLR3GLQ9BT43 218 aa5.31□□□□□ -1.56
AC002546.1-201ENST00000588041 GZF1Q9H116 711 aaPredicted RBP5.31□□□□□ -1.56
AC002546.1-201ENST00000588041 HMGB1P09429 215 aaKnown RBP5.31□□□□□ -1.56
AC002546.1-201ENST00000588041 TMCO4Q5TGY1 634 aa5.3□□□□□ -1.56
AC002546.1-201ENST00000588041 CADPS2Q86UW7 1296 aa5.3□□□□□ -1.56
AC002546.1-201ENST00000588041 PLCD3Q8N3E9 789 aa5.29□□□□□ -1.56
AC002546.1-201ENST00000588041 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.29□□□□□ -1.56
AC002546.1-201ENST00000588041 HNRNPUL2Q1KMD3 747 aaKnown RBP5.29□□□□□ -1.56
AC002546.1-201ENST00000588041 ZMYND10O75800 440 aa5.28□□□□□ -1.56
AC002546.1-201ENST00000588041 AKT1S1Q96B36 256 aa5.28□□□□□ -1.56
AC002546.1-201ENST00000588041 POLA2Q14181 598 aa5.28□□□□□ -1.56
AC002546.1-201ENST00000588041 KDM4CQ9H3R0 1056 aa5.27□□□□□ -1.57
AC002546.1-201ENST00000588041 BRD2P25440 801 aaKnown RBP5.27□□□□□ -1.57
AC002546.1-201ENST00000588041 UBE2Q2Q8WVN8 375 aa5.27□□□□□ -1.57
AC002546.1-201ENST00000588041 ZNF692Q9BU19 519 aaPredicted RBP5.27□□□□□ -1.57
AC002546.1-201ENST00000588041 IRX6P78412 446 aaPredicted RBP5.26□□□□□ -1.57
AC002546.1-201ENST00000588041 FAM177A1Q8N128 213 aaPredicted RBP5.26□□□□□ -1.57
AC002546.1-201ENST00000588041 STK25O00506 426 aa5.26□□□□□ -1.57
AC002546.1-201ENST00000588041 IRF5Q13568 498 aa5.26□□□□□ -1.57
AC002546.1-201ENST00000588041 ZNF777Q9ULD5 760 aaPredicted RBP5.25□□□□□ -1.57
AC002546.1-201ENST00000588041 RETREG2Q8NC44 543 aa5.24□□□□□ -1.57
AC002546.1-201ENST00000588041 TRAIPQ9BWF2 469 aa5.24□□□□□ -1.57
AC002546.1-201ENST00000588041 FAM117AQ9C073 453 aa5.24□□□□□ -1.57
AC002546.1-201ENST00000588041 E9PSI1 815 aa5.24□□□□□ -1.57
AC002546.1-201ENST00000588041 EVX2Q03828 476 aa5.23□□□□□ -1.57
AC002546.1-201ENST00000588041 MIER1Q8N108 512 aa5.23□□□□□ -1.57
AC002546.1-201ENST00000588041 REM2Q8IYK8 340 aaPredicted RBP5.22□□□□□ -1.57
AC002546.1-201ENST00000588041 TRAK2O60296 914 aa5.22□□□□□ -1.57
AC002546.1-201ENST00000588041 FXR2P51116 673 aaKnown RBP eCLIP5.22□□□□□ -1.57
AC002546.1-201ENST00000588041 FBXW7Q969H0 707 aa5.21□□□□□ -1.58
AC002546.1-201ENST00000588041 CWC22Q9HCG8 908 aaKnown RBP5.21□□□□□ -1.58
AC002546.1-201ENST00000588041 POTEMA6NI47 508 aa5.2□□□□□ -1.58
AC002546.1-201ENST00000588041 PPM1GO15355 546 aaPredicted RBP5.2□□□□□ -1.58
AC002546.1-201ENST00000588041 ONECUT3O60422 494 aaPredicted RBP5.2□□□□□ -1.58
AC002546.1-201ENST00000588041 TESPA1A2RU30 521 aaPredicted RBP5.19□□□□□ -1.58
AC002546.1-201ENST00000588041 ZNF316A6NFI3 1004 aaPredicted RBP5.19□□□□□ -1.58
AC002546.1-201ENST00000588041 BARGINQ6ZT62 677 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms