RNA–Protein interactions for RNA: ENST00000588041.1

AC002546.1-201, humanhuman

BASIC

Gene AC002546.1, Length 2,504 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC002546.1-201ENST00000588041 CHGAP10645 457 aaKnown RBP5.63□□□□□ -1.51
AC002546.1-201ENST00000588041 CHRDL2Q6WN34 429 aa5.63□□□□□ -1.51
AC002546.1-201ENST00000588041 SPINK5Q9NQ38 1064 aaPredicted RBP5.62□□□□□ -1.51
AC002546.1-201ENST00000588041 ARID3CA6NKF2 412 aa5.6□□□□□ -1.51
AC002546.1-201ENST00000588041 CCDC9Q9Y3X0 531 aaKnown RBP5.59□□□□□ -1.51
AC002546.1-201ENST00000588041 RBM42Q9BTD8 480 aaKnown RBP5.59□□□□□ -1.51
AC002546.1-201ENST00000588041 NEUROD2Q15784 382 aa5.58□□□□□ -1.52
AC002546.1-201ENST00000588041 SPDYE4A6NLX3 237 aa5.57□□□□□ -1.52
AC002546.1-201ENST00000588041 ZNF428Q96B54 188 aa5.57□□□□□ -1.52
AC002546.1-201ENST00000588041 ZMYND15Q9H091 742 aa5.55□□□□□ -1.52
AC002546.1-201ENST00000588041 U3KPZ7 1027 aaPredicted RBP5.55□□□□□ -1.52
AC002546.1-201ENST00000588041 LMOD2Q6P5Q4 547 aa5.53□□□□□ -1.52
AC002546.1-201ENST00000588041 CHMP4AQ9BY43 222 aa5.53□□□□□ -1.52
AC002546.1-201ENST00000588041 ZBTB7CA1YPR0 619 aa5.53□□□□□ -1.52
AC002546.1-201ENST00000588041 RSPH6AQ9H0K4 717 aa5.52□□□□□ -1.53
AC002546.1-201ENST00000588041 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.52□□□□□ -1.53
AC002546.1-201ENST00000588041 PDIA4P13667 645 aaKnown RBP5.51□□□□□ -1.53
AC002546.1-201ENST00000588041 PROM2Q8N271 834 aa5.51□□□□□ -1.53
AC002546.1-201ENST00000588041 SLC24A3Q9HC58 644 aa5.5□□□□□ -1.53
AC002546.1-201ENST00000588041 SHROOM4Q9ULL8 1493 aa5.5□□□□□ -1.53
AC002546.1-201ENST00000588041 APBB1O00213 710 aa5.49□□□□□ -1.53
AC002546.1-201ENST00000588041 LHX8Q68G74 356 aa5.49□□□□□ -1.53
AC002546.1-201ENST00000588041 NKX1-1Q15270 411 aaPredicted RBP5.49□□□□□ -1.53
AC002546.1-201ENST00000588041 SAMD1Q6SPF0 538 aaPredicted RBP5.49□□□□□ -1.53
AC002546.1-201ENST00000588041 ABCB7O75027 752 aa5.48□□□□□ -1.53
AC002546.1-201ENST00000588041 CDK11BP21127 795 aaKnown RBP5.48□□□□□ -1.53
AC002546.1-201ENST00000588041 CDK11AQ9UQ88 783 aaPredicted RBP5.48□□□□□ -1.53
AC002546.1-201ENST00000588041 KCTD17Q8N5Z5 321 aa5.47□□□□□ -1.53
AC002546.1-201ENST00000588041 RAD21O60216 631 aa5.47□□□□□ -1.53
AC002546.1-201ENST00000588041 SPOCK2Q92563 424 aa5.46□□□□□ -1.53
AC002546.1-201ENST00000588041 HAX1O00165 279 aa5.46□□□□□ -1.54
AC002546.1-201ENST00000588041 FOXD4L5Q5VV16 416 aaPredicted RBP5.46□□□□□ -1.54
AC002546.1-201ENST00000588041 FOXD4L4Q8WXT5 416 aaPredicted RBP5.46□□□□□ -1.54
AC002546.1-201ENST00000588041 DHX37Q8IY37 1157 aaKnown RBP5.45□□□□□ -1.54
AC002546.1-201ENST00000588041 MTMR7Q9Y216 660 aa5.45□□□□□ -1.54
AC002546.1-201ENST00000588041 MKRN4PQ13434 485 aaPredicted RBP5.44□□□□□ -1.54
AC002546.1-201ENST00000588041 GPBP1L1Q9HC44 474 aaPredicted RBP5.44□□□□□ -1.54
AC002546.1-201ENST00000588041 ZNF219Q9P2Y4 722 aaPredicted RBP5.44□□□□□ -1.54
AC002546.1-201ENST00000588041 TRIM41Q8WV44 630 aa5.44□□□□□ -1.54
AC002546.1-201ENST00000588041 IL27Q8NEV9 243 aa5.43□□□□□ -1.54
AC002546.1-201ENST00000588041 ZC3H15Q8WU90 426 aaKnown RBP5.43□□□□□ -1.54
AC002546.1-201ENST00000588041 GTPBP6O43824 516 aaPredicted RBP5.42□□□□□ -1.54
AC002546.1-201ENST00000588041 RBM25P49756 843 aaKnown RBP5.42□□□□□ -1.54
AC002546.1-201ENST00000588041 KCNV2Q8TDN2 545 aa5.42□□□□□ -1.54
AC002546.1-201ENST00000588041 MKRN3Q13064 507 aaKnown RBP5.41□□□□□ -1.54
AC002546.1-201ENST00000588041 RGS22Q8NE09 1264 aa5.41□□□□□ -1.54
AC002546.1-201ENST00000588041 AEBP1Q8IUX7 1158 aa5.41□□□□□ -1.54
AC002546.1-201ENST00000588041 CCDC82Q8N4S0 544 aa5.4□□□□□ -1.54
AC002546.1-201ENST00000588041 RNF25Q96BH1 459 aaPredicted RBP5.39□□□□□ -1.55
AC002546.1-201ENST00000588041 HSP90B1P14625 803 aaKnown RBP5.39□□□□□ -1.55
AC002546.1-201ENST00000588041 HS6ST3Q8IZP7 471 aa5.39□□□□□ -1.55
AC002546.1-201ENST00000588041 BCL11AQ9H165 835 aa5.39□□□□□ -1.55
AC002546.1-201ENST00000588041 CIZ1Q9ULV3 898 aaPredicted RBP5.38□□□□□ -1.55
AC002546.1-201ENST00000588041 FAM9AQ8IZU1 332 aaPredicted RBP5.37□□□□□ -1.55
AC002546.1-201ENST00000588041 PCDH10Q9P2E7 1040 aa5.37□□□□□ -1.55
AC002546.1-201ENST00000588041 PUS7Q96PZ0 661 aaKnown RBP5.34□□□□□ -1.56
AC002546.1-201ENST00000588041 PIP4P2Q8N4L2 257 aa5.33□□□□□ -1.56
AC002546.1-201ENST00000588041 MFAP1P55081 439 aaKnown RBP5.32□□□□□ -1.56
AC002546.1-201ENST00000588041 USP35Q9P2H5 1018 aa5.32□□□□□ -1.56
AC002546.1-201ENST00000588041 CLUAP1Q96AJ1 413 aa5.32□□□□□ -1.56
AC002546.1-201ENST00000588041 WDR70Q9NW82 654 aa5.32□□□□□ -1.56
AC002546.1-201ENST00000588041 SEMA3EO15041 775 aa5.31□□□□□ -1.56
AC002546.1-201ENST00000588041 P3H3Q8IVL6 736 aa5.31□□□□□ -1.56
AC002546.1-201ENST00000588041 POLR3GLQ9BT43 218 aa5.31□□□□□ -1.56
AC002546.1-201ENST00000588041 GZF1Q9H116 711 aaPredicted RBP5.31□□□□□ -1.56
AC002546.1-201ENST00000588041 HMGB1P09429 215 aaKnown RBP5.31□□□□□ -1.56
AC002546.1-201ENST00000588041 TMCO4Q5TGY1 634 aa5.3□□□□□ -1.56
AC002546.1-201ENST00000588041 CADPS2Q86UW7 1296 aa5.3□□□□□ -1.56
AC002546.1-201ENST00000588041 PLCD3Q8N3E9 789 aa5.29□□□□□ -1.56
AC002546.1-201ENST00000588041 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.29□□□□□ -1.56
AC002546.1-201ENST00000588041 HNRNPUL2Q1KMD3 747 aaKnown RBP5.29□□□□□ -1.56
AC002546.1-201ENST00000588041 ZMYND10O75800 440 aa5.28□□□□□ -1.56
AC002546.1-201ENST00000588041 AKT1S1Q96B36 256 aa5.28□□□□□ -1.56
AC002546.1-201ENST00000588041 POLA2Q14181 598 aa5.28□□□□□ -1.56
AC002546.1-201ENST00000588041 KDM4CQ9H3R0 1056 aa5.27□□□□□ -1.57
AC002546.1-201ENST00000588041 BRD2P25440 801 aaKnown RBP5.27□□□□□ -1.57
AC002546.1-201ENST00000588041 UBE2Q2Q8WVN8 375 aa5.27□□□□□ -1.57
AC002546.1-201ENST00000588041 ZNF692Q9BU19 519 aaPredicted RBP5.27□□□□□ -1.57
AC002546.1-201ENST00000588041 IRX6P78412 446 aaPredicted RBP5.26□□□□□ -1.57
AC002546.1-201ENST00000588041 FAM177A1Q8N128 213 aaPredicted RBP5.26□□□□□ -1.57
AC002546.1-201ENST00000588041 STK25O00506 426 aa5.26□□□□□ -1.57
AC002546.1-201ENST00000588041 IRF5Q13568 498 aa5.26□□□□□ -1.57
AC002546.1-201ENST00000588041 ZNF777Q9ULD5 760 aaPredicted RBP5.25□□□□□ -1.57
AC002546.1-201ENST00000588041 RETREG2Q8NC44 543 aa5.24□□□□□ -1.57
AC002546.1-201ENST00000588041 TRAIPQ9BWF2 469 aa5.24□□□□□ -1.57
AC002546.1-201ENST00000588041 FAM117AQ9C073 453 aa5.24□□□□□ -1.57
AC002546.1-201ENST00000588041 E9PSI1 815 aa5.24□□□□□ -1.57
AC002546.1-201ENST00000588041 EVX2Q03828 476 aa5.23□□□□□ -1.57
AC002546.1-201ENST00000588041 MIER1Q8N108 512 aa5.23□□□□□ -1.57
AC002546.1-201ENST00000588041 REM2Q8IYK8 340 aaPredicted RBP5.22□□□□□ -1.57
AC002546.1-201ENST00000588041 TRAK2O60296 914 aa5.22□□□□□ -1.57
AC002546.1-201ENST00000588041 FXR2P51116 673 aaKnown RBP eCLIP5.22□□□□□ -1.57
AC002546.1-201ENST00000588041 FBXW7Q969H0 707 aa5.21□□□□□ -1.58
AC002546.1-201ENST00000588041 CWC22Q9HCG8 908 aaKnown RBP5.21□□□□□ -1.58
AC002546.1-201ENST00000588041 POTEMA6NI47 508 aa5.2□□□□□ -1.58
AC002546.1-201ENST00000588041 PPM1GO15355 546 aaPredicted RBP5.2□□□□□ -1.58
AC002546.1-201ENST00000588041 ONECUT3O60422 494 aaPredicted RBP5.2□□□□□ -1.58
AC002546.1-201ENST00000588041 TESPA1A2RU30 521 aaPredicted RBP5.19□□□□□ -1.58
AC002546.1-201ENST00000588041 ZNF316A6NFI3 1004 aaPredicted RBP5.19□□□□□ -1.58
AC002546.1-201ENST00000588041 BARGINQ6ZT62 677 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms